Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in scaffold_m20_p_3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Pipistrellus kuhlii
Full Name N/A
Also known as NULL
Coordinate scaffold_m20_p_3:89307861-89312394
Strand -
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P7 scaffold_m20_p_2:48174600-48175801 - Intragenic
N/A UCSC
HMGB1P14 scaffold_m20_p_6:51146652-51147465 + Intragenic
N/A UCSC
HMGB1P18 scaffold_m20_p_18:4572786-4573560 - Intragenic
N/A UCSC
HMGB1P1 scaffold_m20_p_1:118701458-118702085 + Intergenic
N/A UCSC
HMGB1P2 scaffold_m20_p_1:189330065-189330486 - Intragenic
N/A UCSC
HMGB1P3 scaffold_m20_p_1:49860205-49860765 - Intragenic
N/A UCSC
HMGB1P4 scaffold_m20_p_2:108529495-108529688 + Intergenic
N/A UCSC
HMGB1P5 scaffold_m20_p_2:120199915-120200472 - Intergenic
N/A UCSC
HMGB1P6 scaffold_m20_p_2:127892244-127892627 - Intergenic
N/A UCSC
HMGB1P8 scaffold_m20_p_3:133582445-133582732 - Intergenic
N/A UCSC
HMGB1P9 scaffold_m20_p_3:152495342-152495783 - Intergenic
N/A UCSC
HMGB1P10 scaffold_m20_p_3:43690823-43691409 - Intergenic
N/A UCSC
HMGB1P11 scaffold_m20_p_4:68805653-68806228 - Intergenic
N/A UCSC
HMGB1P12 scaffold_m20_p_4:80080435-80080891 - Intergenic
N/A UCSC
HMGB1P13 scaffold_m20_p_5:62963859-62964149 + Intragenic
N/A UCSC
HMGB1P15 scaffold_m20_p_10:54866455-54866978 + Intragenic
N/A UCSC
HMGB1P16 scaffold_m20_p_13:36044807-36045294 + Intragenic
N/A UCSC
HMGB1P17 scaffold_m20_p_18:26213609-26213840 - Intergenic
N/A UCSC
HMGB1P19 scaffold_m20_p_22:11199133-11199322 + Intergenic
N/A UCSC
HMGB1P20 scaffold_m20_p_24:3324028-3324492 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>HMGB1_x1
AGTGCATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGCGAGCCGGCCGGGCACGGGGTGACTGTGTGCTCGCCGAGGACCATGTCTGCTAAGGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCTCGTTATGAGAGAGAAATGAAAACTTATATTCCTCCTAAAGGGGAAACAAAAAAGAAATTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTCTGTTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTATCCATTGGTGATGTTGCAAAGAAGCTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCTAAGCTGAAGGAGAAATATGAAAAGGATATTGCTGCCTACCGGGCTAAAGGAAAGCCTGATGCTGCCAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaagaagacgaggaagatgatgatgaggaagaggaggaggaagatgaagaagacgaagaagaagatgatgatgatgaataagTTGATTCTAGCGCAGGTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGGTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGC
>HMGB1_x2
ATGGGCAAAGGAGATCCCAAGAAGCCGAGAGGCAAAATGTCATCCTATGCTTTCTTTGTGCAAACTTGCCGGGAGGAACACAAGAAGAAGCACCCGGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAGGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCTCGTTATGAGAGAGAAATGAAAACTTATATTCCTCCTAAAGGGGAAACAAAAAAGAAATTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTCTGTTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTATCCATTGGTGATGTTGCAAAGAAGCTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCTAAGCTGAAGGAGAAATATGAAAAGGATATTGCTGCCTACCGGGCTAAAGGAAAGCCTGATGCTGCCAAAAAGGGAGTTGTCAAGGCTGAaaaaagcaagaaaaagaaggaagaggaagaagacgaggaagatgatgatgaggaagaggaggaggaagatgaagaagacgaagaagaagatgatgatgatgaataa