Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PHGDH
Plot displaying the genomic locations of a parental gene (in scaffold_m20_p_24) and its retrocopy(ies). Each line represents a retrocopy.
Specie Pipistrellus kuhlii
Full Name N/A
Also known as NULL
Coordinate scaffold_m20_p_24:9396836-9423223
Strand +
Gene summary N/A

Retrocopy(s) from PHGDH

Retroname Coord Strand Genomic Region ENSG
PHGDHP7 scaffold_m20_p_1:93321780-93322572 + Intragenic
N/A UCSC
PHGDHP5 scaffold_m20_p_1:77989622-77990661 + Intergenic
N/A UCSC
PHGDHP8 scaffold_m20_p_1:96000707-96001516 - Intergenic
N/A UCSC
PHGDHP16 scaffold_m20_p_16:7293264-7293589 - Intergenic
N/A UCSC
PHGDHP19 scaffold_m20_p_21:7109674-7111017 + Intragenic
N/A UCSC
PHGDHP9 scaffold_m20_p_2:115536657-115537027 - Intergenic
N/A UCSC
PHGDHP10 scaffold_m20_p_2:68752822-68753658 + Intergenic
N/A UCSC
PHGDHP13 scaffold_m20_p_3:91705942-91707599 - Intragenic
N/A UCSC
PHGDHP1 scaffold_m20_p_1:17781344-17782978 - Intragenic
N/A UCSC
PHGDHP2 scaffold_m20_p_1:190574516-190575961 - Intergenic
N/A UCSC
PHGDHP3 scaffold_m20_p_1:54486736-54488479 - Intergenic
N/A UCSC
PHGDHP4 scaffold_m20_p_1:64546072-64547694 - Intergenic
N/A UCSC
PHGDHP6 scaffold_m20_p_1:92101274-92102769 - Intragenic
N/A UCSC
PHGDHP11 scaffold_m20_p_2:97822092-97823660 + Intergenic
N/A UCSC
PHGDHP12 scaffold_m20_p_3:102120709-102122841 + Intragenic
N/A UCSC
PHGDHP15 scaffold_m20_p_12:1200006-1201647 + Intergenic
N/A UCSC
PHGDHP17 scaffold_m20_p_19:5050411-5050871 - Intergenic
N/A UCSC
PHGDHP18 scaffold_m20_p_19:7476485-7477946 + Intergenic
N/A UCSC
PHGDHP14 scaffold_m20_p_9:30368654-30370242 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>PHGDH_x1
ATGGTTAAGAGCGCGCAGGCCGACCCCCGCCTTTCCGCCCTCGTGGGTAAGCCCCTGTATTCCGGACACTGGTGTCTGCAGAAGGCTTAGCATGGCTCGGCGTATGGTAACCGTCCCGTGGTTGCCATTATGAATAATGTAAATACTAATCCCAATGACACACACGCTCTCTCTCACGACCAGACTGTAGGGTACGACCCCATCATCTCCCCAGAGGTCTCGGCCTCCTTCGGCGTTCAGCAGCTGCCCCTGGAGGAGATCTGGCCCCTCTGTGACTTCATCACGGTGCACACCCCTCTCCTGCCCTCCACGACAGGCCTGCTGAACGACGGCACCTTCGCGCTGTGCAAGAAGGGCGTGCGCGTGGTGAACTGCGCCCGCGGGGGCATCGTGGACGAGGGTGCCCTGCTGCGCGCCCTGCAGTCCGGGCAGTGTGCGGGCGCCGCGCTGGACGTGTTCACCGAGGAGCCGCCCCGGGACCGCGCCCTGGTGGACCACGAGAACGTCATCAGCTGCCCCCACCTGGGCGCCAGCACCAGGGAGGCGCAGAGCCGCTGCGGGGAGGAGATCGCCGTGCAGTTCGTGGACATGGTGAAGGGCAGAGCCCTCGCGGGGGTCGTGAATGCCCAGGCCCTCACCAGCGCCTTCTCTCCGCACACCAAGCCGTGGATCGGCCTGGCAGAAGCTCTGGGGACTCTGATGCGAGCCTGGGCCGGATCCCCCAAAGGGACCATCCAGGTGGTAACGCAGGGCGTATCCCTGAAGAATGCCGGGAACTGCCTGAGCCCCGCAGTCATCGTCGGCCTCCTCAAGGACGCTTCCAATCACGCGGACGTGAACTTGGTGAACGCCAAGCTGCTGGTGAAGGAGGCTGGCCTCAATGTCACCTCCTCCCATAACCCCGCCGTGCCAGGAGAGCAGGGATGCGGGGAAGGCCTCCTGAGCGTGGCCCTGGCGGGTGCCCCCTACCAGGCCGTGGGCTTCGTCCAGGGCACCACGCCTGTGCTGCAGGCGCTCAACGGAGCCGCCTTCCGACCCGAAGTGCCTCTCCGCAGGGGGCTGCCCCTGCTGCTGTTCCGAGCCCAGCCCTCCAACCCCGCCATGCTGCCCACCATGATCGGGCTCCTGGCAGAGGCCGGCGTGCAGCTGCTGTCCTACCAGACCTCGGTGGTGTCCGACGGGGAGACCTGGCACGTCATGGGCATCTCCTCGCTGCTGCCCAGCCTGGACGCCTGGAAGCCGCATGTGACCGAGGCCTTCCAGTTCCTTTTCTGACCTTGGGGCTCCCCGGGACCAGGGGACCAGCTGTGGGGGCTTTGTGACCAACACGGAGAGGTCACACTCCCAGGGCTGGCACCACGGACGGACGTGGTCTGATCCCTGTTATAACCACCTAATAAACAGCCCCCCCACCCCCCC
>PHGDH_x2
ACTCCTTCGCATTCTGGGCAGGCACAGGCTGCCCTCGCTCAGCTCACTCCCCCTGAACCGTCCTGTGCAGACTTGAAGCAAGTCACAGCTAGTCCATGGCTGGGACTGCGAAGGCCTGATCGTGCGCTCGGCCACCAAGGTGACCGCCGATGTCATCAACGCCGCGGAGAAGCTCCAGGTGGTGGGCAGGGCCGGCACCGGCGTGGACAACGTGGACCTGGAGGCCGCCACGAGGAAGGGCATCCTGGTCATGAACACCCCCAACGGGAACAGCCTCAGTGCTGCGGAGCTCACCTGCGGGATGATCATGTGTCTGGCCAGGCAGATTCCCCAGGCGACGGCGTCGATGAAGGATGGCAAATGGGACCGGAAGAAGTTCATGGGGACCGAGTTGAATGGAAAGACGCTGGGGATTCTTGGCCTGGGGAGGATCGGGAGAGAGGTGGCCGTGCGGATGCAGTCCTTCGGGATGAAGACTGTAGGGTACGACCCCATCATCTCCCCAGAGGTCTCGGCCTCCTTCGGCGTTCAGCAGCTGCCCCTGGAGGAGATCTGGCCCCTCTGTGACTTCATCACGGTGCACACCCCTCTCCTGCCCTCCACGACAGGCCTGCTGAACGACGGCACCTTCGCGCTGTGCAAGAAGGGCGTGCGCGTGGTGAACTGCGCCCGCGGGGGCATCGTGGACGAGGGTGCCCTGCTGCGCGCCCTGCAGTCCGGGCAGTGTGCGGGCGCCGCGCTGGACGTGTTCACCGAGGAGCCGCCCCGGGACCGCGCCCTGGTGGACCACGAGAACGTCATCAGCTGCCCCCACCTGGGCGCCAGCACCAGGGAGGCGCAGAGCCGCTGCGGGGAGGAGATCGCCGTGCAGTTCGTGGACATGGTGAAGGGCAGAGCCCTCGCGGGGGTCGTGAATGCCCAGGCCCTCACCAGCGCCTTCTCTCCGCACACCAAGCCGTGGATCGGCCTGGCAGAAGCTCTGGGGACTCTGATGCGAGCCTGGGCCGGATCCCCCAAAGGGACCATCCAGGTGGTAACGCAGGGCGTATCCCTGAAGAATGCCGGGAACTGCCTGAGCCCCGCAGTCATCGTCGGCCTCCTCAAGGACGCTTCCAATCACGCGGACGTGAACTTGGTGAACGCCAAGCTGCTGGTGAAGGAGGCTGGCCTCAATGTCACCTCCTCCCATAACCCCGCCGTGCCAGGAGAGCAGGGATGCGGGGAAGGCCTCCTGAGCGTGGCCCTGGCGGGTGCCCCCTACCAGGCCGTGGGCTTCGTCCAGGGCACCACGCCTGTGCTGCAGGCGCTCAACGGAGCCGCCTTCCGACCCGAAGTGCCTCTCCGCAGGGGGCTGCCCCTGCTGCTGTTCCGAGCCCAGCCCTCCAACCCCGCCATGCTGCCCACCATGATCGGGCTCCTGGCAGAGGCCGGCGTGCAGCTGCTGTCCTACCAGACCTCGGTGGTGTCCGACGGGGAGACCTGGCACGTCATGGGCATCTCCTCGCTGCTGCCCAGCCTGGACGCCTGGAAGCCGCATGTGACCGAGGCCTTCCAGTTCCTTTTCTGACCTTGGGGCTCCCCGGGACCAGGGGACCAGCTGTGGGGGCTTTGTGACCAACACGGAGAGGTCACACTCCCAGGGCTGGCACCACGGACGGACGTGGTCTGATCCCTGTTATAACCACCTAATAAACAGCCCCCCCACCCCCCCC
>PHGDH_x4
ACACAGGCCCGGCCTCCCGAGCGCGCTCCGAGGCGCTTCTGGTCCCGGGAGAGAGAGCGCGCTGGATCCCAGGCCGGCGCCAGCCATGGCCTTCGCAAACCTGCAGAAAGTGCTCATCAGTGACAGCCTGGACCCTTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACCTGAGCCAGCAGCTGCCCCTGGAGGAGATCTGGCCCCTCTGTGACTTCATCACGGTGCACACCCCTCTCCTGCCCTCCACGACAGGCCTGCTGAACGACGGCACCTTCGCGCTGTGCAAGAAGGGCGTGCGCGTGGTGAACTGCGCCCGCGGGGGCATCGTGGACGAGGGTGCCCTGCTGCGCGCCCTGCAGTCCGGGCAGTGTGCGGGCGCCGCGCTGGACGTGTTCACCGAGGAGCCGCCCCGGGACCGCGCCCTGGTGGACCACGAGAACGTCATCAGCTGCCCCCACCTGGGCGCCAGCACCAGGGAGGCGCAGAGCCGCTGCGGGGAGGAGATCGCCGTGCAGTTCGTGGACATGGTGAAGGGCAGAGCCCTCGCGGGGGTCGTGAATGCCCAGGCCCTCACCAGCGCCTTCTCTCCGCACACCAAGCCGTGGATCGGCCTGGCAGAAGCTCTGGGGACTCTGATGCGAGCCTGGGCCGGATCCCCCAAAGGGACCATCCAGGTGGTAACGCAGGGCGTATCCCTGAAGAATGCCGGGAACTGCCTGAGCCCCGCAGTCATCGTCGGCCTCCTCAAGGACGCTTCCAATCACGCGGACGTGAACTTGGTGAACGCCAAGCTGCTGGTGAAGGAGGCTGGCCTCAATGTCACCTCCTCCCATAACCCCGCCGTGCCAGGAGAGCAGGGATGCGGGGAAGGCCTCCTGAGCGTGGCCCTGGCGGGTGCCCCCTACCAGGCCGTGGGCTTCGTCCAGGGCACCACGCCTGTGCTGCAGGCGCTCAACGGAGCCGCCTTCCGACCCGAAGTGCCTCTCCGCAGGGGGCTGCCCCTGCTGCTGTTCCGAGCCCAGCCCTCCAACCCCGCCATGCTGCCCACCATGATCGGGCTCCTGGCAGAGGCCGGCGTGCAGCTGCTGTCCTACCAGACCTCGGTGGTGTCCGACGGGGAGACCTGGCACGTCATGGGCATCTCCTCGCTGCTGCCCAGCCTGGACGCCTGGAAGCCGCATGTGACCGAGGCCTTCCAGTTCCTTTTCTGACCTTGGGGCTCCCCGGGACCAGGGGACCAGCTGTGGGGGCTTTGTGACCAACACGGAGAGGTCACACTCCCAGGGCTGGCACCACGGACGGACGTGGTCTGATCCCTGTTATAACCACCTAATAAACAGCCCCCCCACCCCCCCC
>PHGDH_x5
agaataggcgtatcttctataaatGCGGTGCAGGAATTCATGAATGAGTCCTTCGGAGGAAAGAAGCGAAGACAAAGCATCGCTCTGACGAAAGTGCTCATCAGTGACAGCCTGGACCCTTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACCTGAGCCAGGAGGAGCTGATCGCCGAGCTGCAGGACTGCGAAGGCCTGATCGTGCGCTCGGCCACCAAGGTGACCGCCGATGTCATCAACGCCGCGGAGAAGCTCCAGGTGGTGGGCAGGGCCGGCACCGGCGTGGACAACGTGGACCTGGAGGCCGCCACGAGGAAGGGCATCCTGGTCATGAACACCCCCAACGGGAACAGCCTCAGTGCTGCGGAGCTCACCTGCGGGATGATCATGTGTCTGGCCAGGCAGATTCCCCAGGCGACGGCGTCGATGAAGGATGGCAAATGGGACCGGAAGAAGTTCATGGGGACCGAGTTGAATGGAAAGACGCTGGGGATTCTTGGCCTGGGGAGGATCGGGAGAGAGGTGGCCGTGCGGATGCAGTCCTTCGGGATGAAGACTGTAGGGTACGACCCCATCATCTCCCCAGAGGTCTCGGCCTCCTTCGGCGTTCAGCAGCTGCCCCTGGAGGAGATCTGGCCCCTCTGTGACTTCATCACGGTGCACACCCCTCTCCTGCCCTCCACGACAGGCCTGCTGAACGACGGCACCTTCGCGCTGTGCAAGAAGGGCGTGCGCGTGGTGAACTGCGCCCGCGGGGGCATCGTGGACGAGGGTGCCCTGCTGCGCGCCCTGCAGTCCGGGCAGTGTGCGGGCGCCGCGCTGGACGTGTTCACCGAGGAGCCGCCCCGGGACCGCGCCCTGGTGGACCACGAGAACGTCATCAGCTGCCCCCACCTGGGCGCCAGCACCAGGGAGGCGCAGAGCCGCTGCGGGGAGGAGATCGCCGTGCAGTTCGTGGACATGGTGAAGGGCAGAGCCCTCGCGGGGGTCGTGAATGCCCAGGCCCTCACCAGCGCCTTCTCTCCGCACACCAAGCCGTGGATCGGCCTGGCAGAAGCTCTGGGGACTCTGATGCGAGCCTGGGCCGGATCCCCCAAAGGGACCATCCAGGTGGTAACGCAGGGCGTATCCCTGAAGAATGCCGGGAACTGCCTGAGCCCCGCAGTCATCGTCGGCCTCCTCAAGGACGCTTCCAATCACGCGGACGTGAACTTGGTGAACGCCAAGCTGCTGGTGAAGGAGGCTGGCCTCAATGTCACCTCCTCCCATAACCCCGCCGTGCCAGGAGAGCAGGGATGCGGGGAAGGCCTCCTGAGCGTGGCCCTGGCGGGTGCCCCCTACCAGGCCGTGGGCTTCGTCCAGGGCACCACGCCTGTGCTGCAGGCGCTCAACGGAGCCGCCTTCCGACCCGAAGTGCCTCTCCGCAGGGGGCTGCCCCTGCTGCTGTTCCGAGCCCAGCCCTCCAACCCCGCCATGCTGCCCACCATGATCGGGCTCCTGGCAGAGGCCGGCGTGCAGCTGCTGTCCTACCAGACCTCGGTGGTGTCCGACGGGGAGACCTGGCACGTCATGGGCATCTCCTCGCTGCTGCCCAGCCTGGACGCCTGGAAGCCGCATGTGACCGAGGCCTTCCAGTTCCTTTTCTGACCTTGGGGCTCCCCGGGACCAGGGGACCAGCTGTGGGGGCTTTGTGACCAACACGGAGAGGTCACACTCCCAGGGCTGGCACCACGGACGGACGTGGTCTGATCCCTGTTATAACCACCTAATAAACAGCCCCCCCACCCCCCCC
>PHGDH_x6
ATGGCCTTCGCAAACCTGCAGAAAGTGCTCATCAGTGACAGCCTGGACCCTTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACCTGAGCCAGGAGGAGCTGATCGCCGAGCTGCAGGACTGCGAAGGCCTGATCGTGCGCTCGGCCACCAAGGTGACCGCCGATGTCATCAACGCCGCGGAGAAGCTCCAGGTGGTGGGCAGGGCCGGCACCGGCGTGGACAACGTGGACCTGGAGGCCGCCACGAGGAAGGGCATCCTGGTCATGAACACCCCCAACGGGAACAGCCTCAGTGCTGCGGAGCTCACCTGCGGGATGATCATGTGTCTGGCCAGGCAGATTCCCCAGGCGACGGCGTCGATGAAGGATGGCAAATGGGACCGGAAGAAGTTCATGGGGACCGAGTTGAATGGAAAGACGCTGGGGATTCTTGGCCTGGGGAGGATCGGGAGAGAGGTGGCCGTGCGGATGCAGTCCTTCGGGATGAAGACTGTAGGGTACGACCCCATCATCTCCCCAGAGGTCTCGGCCTCCTTCGGCGTTCAGCAGCTGCCCCTGGAGGAGATCTGGCCCCTCTGTGACTTCATCACGGTGCACACCCCTCTCCTGCCCTCCACGACAGGCCTGCTGAACGACGGCACCTTCGCGCTGTGCAAGAAGGGCGTGCGCGTGGTGAACTGCGCCCGCGGGGGCATCGTGGACGAGGGTGCCCTGCTGCGCGCCCTGCAGTCCGGGCAGTGTGCGGGCGCCGCGCTGGACGTGTTCACCGAGGAGCCGCCCCGGGACCGCGCCCTGGTGGACCACGAGAACGTCATCAGCTGCCCCCACCTGGGCGCCAGCACCAGGGAGGCGCAGAGCCGCTGCGGGGAGGAGATCGCCGTGCAGTTCGTGGACATGGTGAAGGGCAGAGCCCTCGCGGGGGTCGTGAATGCCCAGGCCCTCACCAGCGCCTTCTCTCCGCACACCAAGCCGTGGATCGGCCTGGCAGAAGCTCTGGGGACTCTGATGCGAGCCTGGGCCGGATCCCCCAAAGGGACCATCCAGGTGGTAACGCAGGGCGTATCCCTGAAGAATGCCGGGAACTGCCTGAGCCCCGCAGTCATCGTCGGCCTCCTCAAGGACGCTTCCAATCACGCGGACGTGAACTTGGTGAACGCCAAGCTGCTGGTGAAGGAGGCTGGCCTCAATGTCACCTCCTCCCATAACCCCGCCGTGCCAGGAGAGCAGGGATGCGGGGAAGGCCTCCTGAGCGTGGCCCTGGCGGGTGCCCCCTACCAGGCCGTGGGCTTCGTCCAGGGCACCACGCCTGTGCTGCAGGCGCTCAACGGAGCCGCCTTCCGACCCGAAGTGCCTCTCCGCAGGGGGCTGCCCCTGCTGCTGTTCCGAGCCCAGCCCTCCAACCCCGCCATGCTGCCCACCATGATCGGGCTCCTGGCAGAGGCCGGCGTGCAGCTGCTGTCCTACCAGACCTCGGTGGTGTCCGACGGGGAGACCTGGCACGTCATGGGCATCTCCTCGCTGCTGCCCAGCCTGGACGCCTGGAAGCCGCATGTGACCGAGGCCTTCCAGTTCCTTTTCTGA