Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL39
Plot displaying the genomic locations of a parental gene (in scaffold_m20_p_19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Pipistrellus kuhlii
Full Name N/A
Also known as NULL
Coordinate scaffold_m20_p_19:21288935-21295812
Strand +
Gene summary N/A

Retrocopy(s) from RPL39

Retroname Coord Strand Genomic Region ENSG
RPL39P1 scaffold_m20_p_1:117938439-117938590 - Intragenic
N/A UCSC
RPL39P2 scaffold_m20_p_1:128468120-128468276 - Intergenic
N/A UCSC
RPL39P3 scaffold_m20_p_1:39013659-39013815 + Intragenic
N/A UCSC
RPL39P4 scaffold_m20_p_1:44184191-44184331 + Intergenic
N/A UCSC
RPL39P6 scaffold_m20_p_2:111894516-111894661 - Intergenic
N/A UCSC
RPL39P7 scaffold_m20_p_2:51566487-51566643 - Intragenic
N/A UCSC
RPL39P8 scaffold_m20_p_3:110406384-110406540 + Intergenic
N/A UCSC
RPL39P9 scaffold_m20_p_3:127203541-127203696 + Intergenic
N/A UCSC
RPL39P10 scaffold_m20_p_4:70791540-70791677 - Intergenic
N/A UCSC
RPL39P11 scaffold_m20_p_5:18459223-18459375 + Intergenic
N/A UCSC
RPL39P12 scaffold_m20_p_5:20816631-20816787 + Intragenic
N/A UCSC
RPL39P13 scaffold_m20_p_5:45981641-45981793 + Intergenic
N/A UCSC
RPL39P14 scaffold_m20_p_5:52628430-52628570 + Intergenic
N/A UCSC
RPL39P15 scaffold_m20_p_5:81100847-81100994 - Intergenic
N/A UCSC
RPL39P17 scaffold_m20_p_6:52813079-52813235 - Intergenic
N/A UCSC
RPL39P18 scaffold_m20_p_6:80088088-80088244 + Intergenic
N/A UCSC
RPL39P19 scaffold_m20_p_7:20081672-20081828 + Intergenic
N/A UCSC
RPL39P20 scaffold_m20_p_7:41891439-41891595 + Intergenic
N/A UCSC
RPL39P21 scaffold_m20_p_8:17954922-17955078 + Intragenic
N/A UCSC
RPL39P22 scaffold_m20_p_9:43056247-43056403 - Intergenic
N/A UCSC
RPL39P23 scaffold_m20_p_9:66144877-66145033 + Intergenic
N/A UCSC
RPL39P24 scaffold_m20_p_10:11467455-11467600 - Intragenic
N/A UCSC
RPL39P26 scaffold_m20_p_11:21386602-21386751 + Intragenic
Intragenic
N/A UCSC
RPL39P28 scaffold_m20_p_12:7234117-7234273 + Intergenic
N/A UCSC
RPL39P29 scaffold_m20_p_17:3826242-3826398 - Intergenic
N/A UCSC
RPL39P31 scaffold_m20_p_20:15255041-15255197 - Intragenic
N/A UCSC
RPL39P32 scaffold_m20_p_23:12146674-12146830 - Intragenic
N/A UCSC
RPL39P16 scaffold_m20_p_6:26584725-26584880 - Intragenic
N/A UCSC
RPL39P30 scaffold_m20_p_17:702675-702828 + Intragenic
N/A UCSC
RPL39P5 scaffold_m20_p_1:63574477-63574885 + Intergenic
N/A UCSC
RPL39P25 scaffold_m20_p_10:18573522-18573852 - Intergenic
N/A UCSC
RPL39P27 scaffold_m20_p_11:6486125-6486521 + Intragenic
N/A UCSC
RPL39P33 scaffold_m20_p_24:9388397-9388818 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>RPL39_x1
ATGTCTTCCCACAAGACTTTCAGGATCaagaggttcctggccaagaaacagaagcagaatcggcccattccccaatggattcggatgaaaaCTGGTAATAAAATCAGGTACAACTCGAAGAGGAGACATTGGAGAAGAACCAAACTGGGCCTATGA
>RPL39_x2
AAACCCCTGGCGCTCAGACTGGCCGCCCCTCCTCCGCCCCGTGGAGTTGGGCGCGCCCACCCCGCTCCCGGCGCCCCCAGCGCTTCTGCTTAGGCGTTGATGATCGCTGCCATCCTCACCCACCAAACAGGTGCCCCCGGCACACGGAAAGGCTCCAAGGAACCCACCGGCAGAAGACGCGCCACGAGAACTGCATTTCCCAGGGCCGCGCCCGCGTTCCCACAGCTCCCTGGGAGCGCGAGGGGCGGGCCTCCCGGAGGGGGTGGCGAACGCACCGCCTCAATCCCCGTAGCCCCTCCCCGGCAGCGCCGCTAAATACGTCCTTCCGCTTCCTTCTCTCTCTTTCTCCGCCATCGAGGTGCGCGCTCGCCTCTCCCTCACCATGTCTTCCCACAAGACTTTCAGGATCaagaggttcctggccaagaaacagaagcagaatcggcccattccccaatggattcggatgaaaaCTGGTAATAAAATCAGgaagaaacatcaatcagttgcttcctgtacacgccctgaaggagaattgaacccacaaccttttggtgcatgggactacactccaaccgagagcctgtacacagctaAATTTTTTTATTTAATTGTAATTAAGTAGCTCCACGTGGCAAGTTGCTTTTATACTTTGTTATGAGAGCAttttttaaattaaggtattacaaatgtgtccttatccccccattgtcccctcatttccccagtcctgccctcaTATTTTTTATATCCTCATGCCTGAGTGTAGCACATTCTTTTTAAAATGAATAGCATCTTTATATGCTCTTCCTCAATACAACTAGGCATCATCTGAACCAGAGATAGACAAACTGGTCTACTGCCTGATTTTGTAAGGTCTGTGAACTAGATTGCTGCAATTTTAAGTGGTTAAAAAATACGTTGACGCTAAAGAAATTAAAATTTACTGGATATTtatgtgctgggcactattctaagcacttgggattaattagttggATTTGTCTAATATGCAAATGGGTAATAGGCATTATGCAAGCCATGTCAAATGTCTGGAAAAGGTGGGAAGTAACAAGTGTCCTCATAACCTTTGGAATTAGGGTGGAAATGCAGTGAGGGATGGGGAGGGTTTCTTTGGGTCAGTCTCAGCTGGAAGGACTCATTCACAATTCCCTCAGGTCCGGAGGTGACAACAGATACTATCCCATCATACCTTAGTGTTTTTttgttttgttttttttaatatattttcttgatttttttagagagggacagagttagaaatatccatgagagagtatcatcaatcagctgcctctggcacaccccctgctggggatgtgcccgcaaccaaggtacttgcccttgacgggaatcaaacccaggacctttcagtccgcaggctgacctctatccatagccaaaccggttttggcttttttgtttgtttgtttaaatTACTGGCATGTGGTTTCTCTTAATTTGAATTTCACATTTAAACAGTATATTATGATGTATCAGCAGTTTGTTTTTTTTAATATATTGATTTATTAAAGAGTTGACtttatttttcagttacagtttacatacaatactatagtaAAAGatttattttattaggaaaacagatttgttccacttagtttatttatgcattcattggttgatttttgtatgtgccctggctagtgaacaaacccacaaccttggtgtattgggacatatattgttgatttttgacaggaagagagggatagagagttagaaacaatgagaaagaaacatctatcagctccctcctgcgcactccttatgggtacgtcccctttattagaatcgaacctgggacccttaagtccacaggccaacactatcccgtgaaccaaattggttagggcatgttttaccattaatttcatggagaggaagggagagggatagagttagaaacataatcgatcagctgactccgtacaccccctactggggggtcaatcccacaaccaaggttcatgcccttgaccagaatcaacccaagacccttcagtctgagggccagtgctctatccactgagccaaactggttaggttccgccctcatcgtgtcccccccccccccccccccccccgctcctccccACACACACACAccatgactattttgtaactaccaatttatacttaattttttcaaccaaccccatggggatcccatctagcaaccattaaaatgttttctggctgaagccggtttggctcagtggatagagcatcagcctgcggactgagaggtcccgggttcgattccggtcaagggcatgtaccttggttgggggcacatccccagtaggaggtgtgcaagaggcagcttattgatgattatctcattgatgtttctcaactatccctctaaaaaaatgaataaaatatatATATTTAAAAATAAATAAAATTTTTCTGAgtttatgttttgttcatttgttttagattctacagttaagtgaaatcatatgctatttgtctttctccgacttattccactcagcacaatacactctaggtccatccatgttgcagatggcaagatttcattcttttttatggctgagtcattccattgtatgtaggcaccattttatccatttgtctattgaagagcacttaggttgcttccatgtcttggctattacaaaggcaacaatgaacatggatgtatatatcttttcaaattactgttttggatgtcttcaggtaaatacccagaagtaggatgctggttccttctttgtcttattacagccttaattaaagtcttattttgtctggtacaagtattgctatcccagctttttctttttttccattttcatgagagaatcttttttcattcctctactttcactgtctttgcatctgatgtgtcttatagacagtatgtttaagtgtcctgttttcttatacatttagccaccctatgtctttttattggagcatttaatccatttgtatttaaagtaattattgacatgtattgccaattgatatatatatttttttttaatttttttTAAAGTATTTTTTGAGAGAGGAAGGGACAgattcttgtctgtaccctgattgggggtgttgaacccacagccttggtgttactgggatgatgctctagccaattgggctgcttggccagggcCTTGATTTGTATTTTTGGTCTTTAGTTTCTTAAAGAAGACCCTTTAACATTTTTAAGTTGATTTTTAGAGGGGTGGGGACATTGGTAGGCTGTCTATTGCATCCCCCCTACCCAGGGATCAGCTGCAACCGAGCcacactggtcaggacttcaacatttcttgtaatactggtttagtggtaatgagctctagctttttcttgtctgggaaattaagattctctgtctttactctttgtaagttgtgacatgactttgtcataatatag
>RPL39_x3
AAACCCCTGGCGCTCAGACTGGCCGCCCCTCCTCCGCCCCGTGGAGTTGGGCGCGCCCACCCCGCTCCCGGCGCCCCCAGCGCTTCTGCTTAGGCGTTGATGATCGCTGCCATCCTCACCCACCAAACAGGTGCCCCCGGCACACGGAAAGGCTCCAAGGAACCCACCGGCAGAAGACGCGCCACGAGAACTGCATTTCCCAGGGCCGCGCCCGCGTTCCCACAGCTCCCTGGGAGCGCGAGGGGCGGGCCTCCCGGAGGGGGTGGCGAACGCACCGCCTCAATCCCCGTAGCCCCTCCCCGGCAGCGCCGCTAAATACGTCCTTCCGCTTCCTTCTCTCTCTTTCTCCGCCATCGAGGTGCGCGCTCGCCTCTCCCTCACCATGTCTTCCCACAAGACTTTCAGGATCaagaggttcctggccaagaaacagaagcagaatcggcccattccccaatggattcggatgaaaaCTGGTAATAAAATCAGCATAGCCACATGAACATCACTTTCGCTGTCTGTTGATGGTGGGACCTGCGTTGTTGTAAGGATTGAAAGAAATGTATGAGAAGCTTGGGTGCCTGCAGTTATCAATATTAGCGTCTTGCTCTGTGGACTCCTGAGCTGGGGACGTATTTTATATTTAGCATTGCACACTTCAGTCCCAGAGAATTGGCACAGCAGACTTATTTTTCTTATCAACTCAGCTGTCTTCAGACTTAAAATTATTGAAAGCAGGTTGCAATTACAGTGCTTCATTTTGTGGGAGTACTGCCATTATCCTGCTGAAAGAAAATCTTGTGTTGGTCATTTTGATTTTGCCTTTATGAGGGTAAAATCATGGCAGGCTGACATGGACAGTTCAGAGGTGGCTTTAACTCTTCAATTCACTTTTTTTTTTTGCTATTAAAGTGAGAGTGTTGATATATTGTAAAAATTATGCAGGAACTTTGTGTGGGTGTGACCCATTATGCAGGAATGATTTTTTGATGTGTTTCAAAATATATATGTGTGTGTGTCTCTGTCTAGGTCTATCTACCTCAGGTTTGTTGAATCAAAGTTGGGTGAGCATACACTTGGGGAGGGGAGAGCTTACCCACCCGCTGCTTCAGTACCACATAAGAACCAGTGTCTTCCTACCCTGGGATCATTTTGAGAGGTAAAAATTTGATTTGACTAGTTCTTAAACATCTAGCAAATCATTTTTTACTCTCCAAAAAGAGCTCCAAACTTGTGAACGGAAAGAAAAGCCTGGACCCTTTGCCTTCCAAGGATATTGTGGTACACAGTGGCAAAGTCTGTGGTGAATGAGCAGCTCGATTGAGGTCAGACTTACTTTTGTAACTTGGAATTTCCTTCTGTGTAGGTACAACTCGAAGAGGAGACATTGGAGAAGAACCAAACTGGGCCTATGAGAACTCACTCATGACAGATGACTCACATATTTATGCTGTATCCAGGTTGCCTACACCTTTAAATGATTGAAAAGATACTACCATCTGGACAGTTGGAGCATTTTAATTGGAGAATTAATGGACTTGTGATTTTGCTCTATTGATTTTTTTTTCCCCTTCTGCAATAGTAGGATGGTTCAGTAATAAATGTGTGAGATCTTTTAAACTGCTGT