Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name RPS3A
Plot displaying the genomic locations of a parental gene (in scaffold_m20_p_8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Pipistrellus kuhlii
Full Name N/A
Also known as NULL
Coordinate scaffold_m20_p_8:50481450-50485332
Strand +
Gene summary N/A

Retrocopy(s) from RPS3A

Retroname Coord Strand Genomic Region ENSG
RPS3AP1 scaffold_m20_p_1:102025132-102025322 - Intergenic
 N/A UCSC
RPS3AP2 scaffold_m20_p_1:149601267-149601645 - Intergenic
 N/A UCSC
RPS3AP5 scaffold_m20_p_2:20984964-20985276 - Intergenic
 N/A UCSC
RPS3AP8 scaffold_m20_p_2:62888719-62889199 + Intergenic
 N/A UCSC
RPS3AP9 scaffold_m20_p_2:90063200-90063535 + Intergenic
 N/A UCSC
RPS3AP13 scaffold_m20_p_3:163725707-163726008 + Intergenic
 N/A UCSC
RPS3AP16 scaffold_m20_p_4:52786427-52786679 - Intergenic
 N/A UCSC
RPS3AP17 scaffold_m20_p_4:80476125-80476818 + Intragenic
 N/A UCSC
RPS3AP21 scaffold_m20_p_6:24167671-24167910 + Intragenic
Intragenic
 N/A UCSC
RPS3AP23 scaffold_m20_p_9:24893339-24893540 - Intragenic
 N/A UCSC
RPS3AP3 scaffold_m20_p_1:58502654-58503105 - Intragenic
 N/A UCSC
RPS3AP4 scaffold_m20_p_1:60387122-60387826 + Intergenic
 N/A UCSC
RPS3AP6 scaffold_m20_p_2:47453247-47453857 + Intergenic
 N/A UCSC
RPS3AP7 scaffold_m20_p_2:59121423-59122059 - Intergenic
 N/A UCSC
RPS3AP10 scaffold_m20_p_3:118045191-118045983 - Intergenic
 N/A UCSC
RPS3AP11 scaffold_m20_p_3:148308615-148309387 - Intragenic
 N/A UCSC
RPS3AP12 scaffold_m20_p_3:149613021-149613708 + Intergenic
 N/A UCSC
RPS3AP14 scaffold_m20_p_3:169823060-169823754 + Intragenic
 N/A UCSC
RPS3AP15 scaffold_m20_p_3:44592843-44593601 + Intragenic
 N/A UCSC
RPS3AP18 scaffold_m20_p_5:38770616-38771406 + Intergenic
 N/A UCSC
RPS3AP19 scaffold_m20_p_5:80751884-80752463 + Intragenic
 N/A UCSC
RPS3AP20 scaffold_m20_p_6:22059648-22060250 + Intergenic
 N/A UCSC
RPS3AP22 scaffold_m20_p_8:27299290-27299594 + Intragenic
 N/A UCSC
RPS3AP24 scaffold_m20_p_10:16108059-16108794 + Intragenic
 N/A UCSC
RPS3AP25 scaffold_m20_p_10:35961298-35961558 + Intergenic
 N/A UCSC
RPS3AP26 scaffold_m20_p_13:13339108-13339319 + Intergenic
 N/A UCSC
RPS3AP27 scaffold_m20_p_14:22085331-22086123 - Intergenic
 N/A UCSC
RPS3AP28 scaffold_m20_p_14:38795578-38796111 + Intragenic
 N/A UCSC
RPS3AP29 scaffold_m20_p_17:22723735-22724355 - Intergenic
 N/A UCSC
RPS3AP30 scaffold_m20_p_22:12885355-12886309 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>RPS3A_x1
GAGCAGCACCATGGCGGTGGGCAAGAATAAGCGCCTTACGAAAGGCGGCAAGAAGGGAGCCAAGAAGAAAGTACCATGATTGAAGCCCATGTCGATGTCAAGACTACCGATGGTTATTTGCTTCGTCTCTTCTGTGTTGGTTTTACTAAAAAACGCAACAATCAGATTCGGAAGACTTCCTATGCTCAGCATCAGCAGGTTCGACAAATCCGGAAGAAAATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTGAAAGAAGTGGTCAATAAATTGATTCCAGACAGCATTGGAAAAGACATAGAAAAGGCTTGCCAATCTATCTATCCGCTCCATGATGTCTTTGTTAGAAAAGTCAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTAATGGAGCTTCATGGTGAAGGCAGCAGTTCTGGAAAAGCTGCTGGGGATGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATATGAGCCTCCAGTCCAAGAATCTGTTTAAAATTCAGACATTCAATGGTGACAAATAAAAAAACCTATTTGTG
>RPS3A_x2
ATGGCGGTGGGCAAGAATAAGCGCCTTACGAAAGGCGGCAAGAAGGGAGCCAAGAAGAAAGTGGTTGATCCATTTTCTAAGAAAGATTGGTATGATGTGAAAGCACCAGCCATGTTCAATATAAGAAATATTGGGAAAACACTGGTTACGAGAACTCAAGGAACCAAAATTGCATCTGATGGTCTGAAGGGTCGTGTTTTTGAAGTGAGCCTGGCTGATCTGCAGAATGATGAAGTTGCATTTAGGAAATTCAAGCTAATCACTGAGGATGTTCAGGGCAAAAACTGCCTGACTAATTTCCATGGCATGGATCTTACCCGGGACAAAATGTGCTCTATGGTCAAGAAGTGGCAGACCATGATTGAAGCCCATGTCGATGTCAAGACTACCGATGGTTATTTGCTTCGTCTCTTCTGTGTTGGTTTTACTAAAAAACGCAACAATCAGATTCGGAAGACTTCCTATGCTCAGCATCAGCAGGTTCGACAAATCCGGAAGAAAATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTGAAAGAAGTGGTCAATAAATTGATTCCAGACAGCATTGGAAAAGACATAGAAAAGGCTTGCCAATCTATCTATCCGCTCCATGATGTCTTTGTTAGAAAAGTCAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTAATGGAGCTTCATGGTGAAGGCAGCAGTTCTGGAAAAGCTGCTGGGGATGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATATGAGCCTCCAGTCCAAGAATCTGTTTAA