Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name RTRAF
Plot displaying the genomic locations of a parental gene (in scaffold_m20_p_1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Pipistrellus kuhlii
Full Name N/A
Also known as NULL
Coordinate scaffold_m20_p_1:28501916-28527038
Strand -
Gene summary N/A

Retrocopy(s) from RTRAF

Retroname Coord Strand Genomic Region ENSG
RTRAFP1 scaffold_m20_p_1:41386129-41387116 - Intragenic
 N/A UCSC
RTRAFP3 scaffold_m20_p_2:79506814-79508274 - Intergenic
 N/A UCSC
RTRAFP9 scaffold_m20_p_9:35507216-35508124 - Intergenic
 N/A UCSC
RTRAFP10 scaffold_m20_p_20:12671164-12672154 + Intergenic
 N/A UCSC
RTRAFP13 scaffold_m20_p_23:194703-195057 - Intergenic
 N/A UCSC
RTRAFP2 scaffold_m20_p_1:53175098-53175353 + Intergenic
 N/A UCSC
RTRAFP4 scaffold_m20_p_2:8912169-8912868 - Intergenic
 N/A UCSC
RTRAFP5 scaffold_m20_p_3:46317566-46318220 - Intergenic
 N/A UCSC
RTRAFP6 scaffold_m20_p_5:53994487-53995136 + Intergenic
 N/A UCSC
RTRAFP7 scaffold_m20_p_7:37805813-37806552 - Intragenic
 N/A UCSC
RTRAFP8 scaffold_m20_p_8:33923011-33923474 - Intragenic
 N/A UCSC
RTRAFP11 scaffold_m20_p_21:11974700-11975414 - Intergenic
 N/A UCSC
RTRAFP12 scaffold_m20_p_21:4397508-4398455 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>RTRAF_x1
ctcgccgcgtcgccgggagctccgccgcccgccgatcctcgcctctcgctcctctcccctcctctcccGGCCGCAGCCCGGGGGCAGAGCGGGACGCCGGGACCATGTTCCGCCGCAAGCTGACGGCGCTCGACTACCACAACCCCGCCGGCTTCAACTGCAAAGATGAAACAGAATTTAGAAACTTCATTGTTTGGCTTGAAGACCAGAAAATCAGACACTACAAGATTGAAGACAGAGTATCTTACAGATGTTAGCTGTCCTTTCAAGATTCAAGATCGACAAGAAGCAATTGACTGGCTTCTTGGTTTAGCTGTTAGACTTGAATATGGAGATAACGCTGAAAAATATAAGGACTCAGTATCTGATAATACAAAAAATGCTGACAATGCAGCAAAAAATGCAGAGCCATTGATCAATTTGGATGTTAATAATCCTGATTTTAAGGCTGGTGTAATGGCTTTAGCTAACCTTCTTCAGATTCAACGTCATGATGATTACCTGGTAATGCTTAAGGCAATTCGCATTTTGGTCCAGGAACGCCTGACACAGGATGCAGTTGCTAAAGCAAATCAAGCAAAAGAGGGGTTGCCTGTTGCTTTAGACAAGCATATTCTTGGTTTTGACACAGGAGATGCAGTTCTTAATGAAGCTGCTCAAATTCTTCGATTGCTGCATATAGAAGAGCTCAGAGAGCTACAGACAAAAATTAATGAAGCCATAGTAGCTGTTCAGGCAATTATTGCTGATCCAAAGACAGACCACAGACTGGGGAAAGTTGGAAGATGAATCTTTTAGGATTTTAGCCTCTCACCTATTTAGTACAGTTGGGAACCATGCACACCATGGTATGTGTTTCAGAATCACAAATCACATTTTCAAGGGAAGAATCCCAAGAAATTGACTATGTTGTAGAGATTTCCATCATTGCTTTTTCTTTAATAAAGTTTGGGAAAGCGG
>RTRAF_x2
ATGTTCCGCCGCAAGCTGACGGCGCTCGACTACCACAACCCCGCCGGCTTCAACTGCAAAGATGAAACAGAATTTAGAAACTTCATTGTTTGGCTTGAAGACCAGAAAATCAGACACTACAAGATTGAAGACAGAGGTAATTTAAGAAACATCCACAGCAATGACTGGCCCAAGTTCTTTGAAAAGTATCTTACAGATGTTAGCTGTCCTTTCAAGATTCAAGATCGACAAGAAGCAATTGACTGGCTTCTTGGTTTAGCTGTTAGACTTGAATATGGAGATAACGCTGAAAAATATAAGGACTCAGTATCTGATAATACAAAAAATGCTGACAATGCAGCAAAAAATGCAGAGCCATTGATCAATTTGGATGTTAATAATCCTGATTTTAAGGCTGGTGTAATGGCTTTAGCTAACCTTCTTCAGATTCAACGTCATGATGATTACCTGGTAATGCTTAAGGCAATTCGCATTTTGGTCCAGGAACGCCTGACACAGGATGCAGTTGCTAAAGCAAATCAAGCAAAAGAGGGGTTGCCTGTTGCTTTAGACAAGCATATTCTTGGTTTTGACACAGGAGATGCAGTTCTTAATGAAGCTGCTCAAATTCTTCGATTGCTGCATATAGAAGAGCTCAGAGAGCTACAGACAAAAATTAATGAAGCCATAGTAGCTGTTCAGGCAATTATTGCTGATCCAAAGACAGACCACAGACTGGGGAAAGTTGGAAGATGA