Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Monodelphis domestica
Full Name N/A
Also known as -
Coordinate chr4:301594904-301601954
Strand -
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P10 chr2:370941677-370942828 + Intergenic
ENSMODG00000018026 UCSC
HMGB1P21 chr6:199751990-199753167 + Intragenic
ENSMODG00000008785 UCSC
HMGB1P2 chr1:264142883-264144094 - Intergenic
N/A UCSC
HMGB1P4 chr1:514642159-514646938 + Intergenic
N/A UCSC
HMGB1P7 chr1:74770618-74771717 - Intergenic
N/A UCSC
HMGB1P12 chr3:237962071-237963234 - Intergenic
N/A UCSC
HMGB1P15 chr3:55065882-55067044 - Intragenic
N/A UCSC
HMGB1P16 chr4:28048161-28048672 + Intragenic
N/A UCSC
HMGB1P17 chr4:326939278-326940462 - Intragenic
N/A UCSC
HMGB1P18 chr5:2648904-2649057 + Intergenic
N/A UCSC
HMGB1P20 chr5:50489152-50495581 + Intergenic
N/A UCSC
HMGB1P22 chr6:214673004-214674117 - Intergenic
N/A UCSC
HMGB1P23 chr6:232500063-232501405 - Intergenic
N/A UCSC
HMGB1P26 chr7:226679271-226679968 - Intergenic
N/A UCSC
HMGB1P27 chr8:14823337-14824446 + Intergenic
N/A UCSC
HMGB1P29 chr8:182586834-182588009 + Intergenic
N/A UCSC
HMGB1P30 chr8:18974073-18975377 + Intergenic
N/A UCSC
HMGB1P31 chr8:78065138-78066292 + Intergenic
N/A UCSC
HMGB1P32 chrX:59326854-59327011 - Intergenic
N/A UCSC
HMGB1P33 chrX:79149923-79150598 + Intragenic
N/A UCSC
HMGB1P1 chr1:130627397-130627616 - Intergenic
N/A UCSC
HMGB1P6 chr1:720933174-720933518 + Intergenic
N/A UCSC
HMGB1P8 chr2:147059395-147060280 + Intragenic
N/A UCSC
HMGB1P9 chr2:252139475-252141712 - Intragenic
N/A UCSC
HMGB1P14 chr3:351846271-351846527 + Intergenic
N/A UCSC
HMGB1P19 chr5:28429862-28430296 - Intragenic
N/A UCSC
HMGB1P28 chr8:177948803-177949825 + Intragenic
N/A UCSC
HMGB1P13 chr3:27232558-27233865 + Intergenic
ENSMODG00000015654 UCSC
HMGB1P3 chr1:404309663-404310073 - Intergenic
N/A UCSC
HMGB1P5 chr1:543556013-543556481 - Intragenic
N/A UCSC
HMGB1P11 chr2:417537909-417539038 + Intergenic
N/A UCSC
HMGB1P24 chr7:108839941-108840165 + Intergenic
N/A UCSC
HMGB1P25 chr7:155680000-155680344 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_001367257.4
CGTCTGGCTCGCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTAAGAGCCGGACGGGCACTGGGCTACTCTGTGCGGCGCTGAGGgaaaataatcaaAAATGGGCAAAGGTGATCCTAAGAAGCCGAGAGGGAAAATGTCTTCATATGCCTTCTTTGTGCAAACCTGCCGGGAGGAACACAAGAAGAAGCACCCAGATGCTTCTGTGAACTTCTcagaattttctaaaaaatgctcagaaaggtggaagACAATGTCagctaaagagaaaggaaaatttgaggaCATGGCAAAAGCTGATAAGGTTCGTtatgaaagagaaatgaagaccTACATACCAcctaaaggagaaacaaaaaagaagtttaaGGATCCCAATGCACCGAAGAGGCCTCCttcggcatttttcttattctgttctGAGTATCGTCCAAAAATCAAAGGGGAGCATCCTGGTCTTTCTATTGGAGATGTGGCCAAAAAATTGGGAGAAATGTGGAATAATACTGCTGCAGATGACAAACAACCTTATGAAAAGAAGGCAGCTAAACTGAAGGAAAAGTATGAAAAGGATATTGCTGCATACCGAGCTAAAGGAAAACCTGATGTGGGTAAAAAGGGAGGCGTTGTCAAAGCTGAGAAGagcaagaaaaagaaggaggaggaagaagatgaggaagatgaagaagatgaggatgatgatgaagaagatgaggaggaggaagaggaagatgatgatgacgatgaatAAGTTTGTTCTAGAgcagttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACtcactccttttaaagaaaaaaaaaaatttgaaatgtaAGGCTGTGtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTTTAGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGTAGTTCATTTTCATCTTCAGTTGTCTTTGATGCAGCATATGAAATAATTGTTGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaagttgcagcTGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTGCCCTTAAATCATAACTTCTTTTTGAGGGGAAGCTCGTCTTTGCTTTTTGTATGCCCATTTGGGATCACATGAATTATTACAGTTTTCATCTTTTCGTATATTtagttgattttaaaaaaaaaaaaa
>XM_007495272.2
acgcacacacaaaGGGAAGGAGCCATATTCTCGCTCTCACTCTCGCCCTCTCGGCGGCGCAGGCGAGGAAGACGAACAGCGGCCATTCCGTGCGCGCCGCGCCGCCGGgaaaataatcaaAAATGGGCAAAGGTGATCCTAAGAAGCCGAGAGGGAAAATGTCTTCATATGCCTTCTTTGTGCAAACCTGCCGGGAGGAACACAAGAAGAAGCACCCAGATGCTTCTGTGAACTTCTcagaattttctaaaaaatgctcagaaaggtggaagACAATGTCagctaaagagaaaggaaaatttgaggaCATGGCAAAAGCTGATAAGGTTCGTtatgaaagagaaatgaagaccTACATACCAcctaaaggagaaacaaaaaagaagtttaaGGATCCCAATGCACCGAAGAGGCCTCCttcggcatttttcttattctgttctGAGTATCGTCCAAAAATCAAAGGGGAGCATCCTGGTCTTTCTATTGGAGATGTGGCCAAAAAATTGGGAGAAATGTGGAATAATACTGCTGCAGATGACAAACAACCTTATGAAAAGAAGGCAGCTAAACTGAAGGAAAAGTATGAAAAGGATATTGCTGCATACCGAGCTAAAGGAAAACCTGATGTGGGTAAAAAGGGAGGCGTTGTCAAAGCTGAGAAGagcaagaaaaagaaggaggaggaagaagatgaggaagatgaagaagatgaggatgatgatgaagaagatgaggaggaggaagaggaagatgatgatgacgatgaatAAGTTTGTTCTAGAgcagttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACtcactccttttaaagaaaaaaaaaaatttgaaatgtaAGGCTGTGtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTTTAGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGTAGTTCATTTTCATCTTCAGTTGTCTTTGATGCAGCATATGAAATAATTGTTGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaagttgcagcTGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTGCCCTTAAATCATAACTTCTTTTTGAGGGGAAGCTCGTCTTTGCTTTTTGTATGCCCATTTGGGATCACATGAATTATTACAGTTTTCATCTTTTCGTATATTtagttgattttaaaaaaaaaaaaagctttgatcTACATGCCCTGCATAATATTGATGGGGTAATAAAACTtgtatagaaattattttcttccataactGGAAATCAGAAGTTCCCAGTTAATAAACTCAAATTTCACATAGTACAGTATTCTATCCAGTTAAAACATTTACCAAGTGGAGAATATAGACATCAGCAGCATGGAATTATTTGAGTAAAACATACTAAAATTCTGTCCTGGAAAGACCAATAGAAAGGTGTGCTCTGATCTTTTGTGTGAGGGATTATACAACATTCACAACTTTATTACTATGTAACTGAAGTTATGTTTATAATTTCCTTCAGAAAAGCTGAGACTATCCTCCCAAAAAAAACCATGAGTTGAAATGCAAGACTGCCACAGTAATCTTTGGCAGTAGACTTAAACTAAAGACTAGGTAGGGTTATAGTATGAAGGAGCTGACAGTGAATGGCCCTTGGGAAACTTTTTAGATTCTTAAAACTGAAAAATTCAGATTTGATTTAAGTCAGTCCCAAATAAAGTGCAGTCTATTTAAAGAGATGTTTTTCCTAATTCGGGTTTATAGATAACTAATATTTGAACCTCTTTAAAAAGCAGGCCTTGATGGAAAATACACAAAATTTGGCGTTATGATAAATTGAACACCAAACAactaatttgaaatattttttcccttctaaaatcAAAGCTAACTGTATTCATTAAAACTGACCATTTATGTTTATCTGCTTACCATTTGGGGGGGATGATTTGGCAGTTTTGTGGttttgaaattatgattttttaagtGCCAGTGTTTTAAATAGCATTCTTGTACTTTTACACGCTTTTGTGATGGAGTACTGTTTTGTTATACAATTTCAACTTTCAGATTCTAATTTCagttttgcatttgtttatgtaTAATTTCAGGAGAAATACTGAACATCTGAATCCTGGATGATACTAATAAACTAATAATTGCagaggttt
>XM_016421865.1
AGAACGGAGAGAGTGAGGAGGCTGCGTCTGGCTCGCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAgaaaataatcaaAAATGGGCAAAGGTGATCCTAAGAAGCCGAGAGGGAAAATGTCTTCATATGCCTTCTTTGTGCAAACCTGCCGGGAGGAACACAAGAAGAAGCACCCAGATGCTTCTGTGAACTTCTcagaattttctaaaaaatgctcagaaaggtggaagACAATGTCagctaaagagaaaggaaaatttgaggaCATGGCAAAAGCTGATAAGGTTCGTtatgaaagagaaatgaagaccTACATACCAcctaaaggagaaacaaaaaagaagtttaaGGATCCCAATGCACCGAAGAGGCCTCCttcggcatttttcttattctgttctGAGTATCGTCCAAAAATCAAAGGGGAGCATCCTGGTCTTTCTATTGGAGATGTGGCCAAAAAATTGGGAGAAATGTGGAATAATACTGCTGCAGATGACAAACAACCTTATGAAAAGAAGGCAGCTAAACTGAAGGAAAAGTATGAAAAGGATATTGCTGCATACCGAGCTAAAGGAAAACCTGATGTGGGTAAAAAGGGAGGCGTTGTCAAAGCTGAGAAGagcaagaaaaagaaggaggaggaagaagatgaggaagatgaagaagatgaggatgatgatgaagaagatgaggaggaggaagaggaagatgatgatgacgatgaatAAGTTTGTTCTAGAgcagttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACtcactccttttaaagaaaaaaaaaaatttgaaatgtaAGGCTGTGtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTTTAGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGTAGTTCATTTTCATCTTCAGTTGTCTTTGATGCAGCATATGAAATAATTGTTGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaagttgcagcTGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTGCCCTTAAATCATAACTTCTTTTTGAGGGGAAGCTCGTCTTTGCTTTTTGTATGCCCATTTGGGATCACATGAATTATTACAGTTTTCATCTTTTCGTATATTtagttgattttaaaaaaaaaaaaa