Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name SQSTM1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Monodelphis domestica
Full Name N/A
Also known as -
Coordinate chr1:385459565-385471840
Strand -
Gene summary N/A

Retrocopy(s) from SQSTM1

Retroname Coord Strand Genomic Region ENSG
SQSTM1P1 chr1:109258045-109258711 - Intragenic
 N/A UCSC
SQSTM1P3 chr4:116685206-116685384 + Intergenic
 N/A UCSC
SQSTM1P2 chr3:493214302-493214607 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_007474182.1
ATATAAGATCCAGAGCGAGGCTGCAGTTGCTAGTTGGTGTGCCCTTGCTTTGCATAtctctttctgttttctctctctctccctcgaCCCCGCCCGTCCGCGAGTTCGGAGTTCGATTGCGCGTGTCCCCATCCGTTTGTCCGAGTTCCCCACAGCTATCGCCGGCGCTGACCATGGAGCGGCTGACGGTAAAAGCCTATCTTATGGGCAAGGAGGAGACGGCCCGCGAGATCCGCCGCTTCACCTTGGACCCGGTCGACGGCCCAGGCCGCTGCGAGCAGCTTCTCCGACGCGTGGCCGAAGTGTTCCCGGCGCTGCGGCCCGGAGGCTTCCAGGCGTACTACCGAGatgAAGATGGGGACCTGATTGCTTTTTCCAGTGATGAGGAGCTAGGCATGGCCATGTGCTACATTAAAGAAGATATCTTGCGGATATATGTTAAAGAGAAAAAGGAGTGTAAACGGGAGCATCGTCCCCCTTGTGTCCAGGAGGTTCCCACCAACATGGTGCACCCCAACGTGATCTGTGATGGCTGCAATGGGCCAGTGGTGGGGAATCGCTTCAAATGTACCATCTGCCCTGACTACGACCTGTGCAACGCCTGCGAGGCCAAAGGCCTTCACAAAGAGCATAACATGATCCTCTTTCAGAATCCCTTCAACCACCCTGAGTGGATTTCTCGCCGACGTTGGCTTCAGAAGATGAGACATGGGCCGAATTTCCCAGCTTTTGGTGGATGGATGCCAGGCTGCTGGGGATTCTTTCCTCCTGATGCCCTGAATCAGATTGCTGCCCAGGCCCAAACGAACAGGACTCCCCCCAATACAGGAGCAGAACAAGGGATTGATGTTGACATTGATGTGGAGCATGGTGGGAAAAGGAGCAAAGTGACTCCATCCTTCTCTCAGCCCAGCAGTGAGGAGAAGGGGAGCCCTCAACCAAGCAGTTCCTCCTCCAGTCAGAGCCAAGCAAGCACCCAAAATTCTGAAATGGAAATGACCCTCTCTGAGAAAATGCAGAAGATAATTTTGGCCTCTTGCATGCAAGTGGATAAGAATCCCTTAGCTCAAGAACAGACAGAGACTGGAAATTCTTCAGGAGGTGATGATGACTGGACTCACTTGTCTTCTAAAGAAGTGGATCCTTCCACAGGTGAACTTCAGTCCCTACAAATGCCAGAATCAGATAGTACAAACTCCATGGATCATTCTCCAGCGGGGCCTACAGGGCTCAGGGAAGCTGCATTATACCCACATCTTCCACCAGAAGCAGATCCTTGCTTGATTGAGTCGCTCTCCCAGATGTTGTCCATGGGCTTCTCCGATGAGGGAGGCTGGCTCACCAAACTCTTGCAGACCAAGAACTACGACATTGGAGCCGCTCTCGATGCCATCCAGTATTCCAAGCATGCACCCCATCCCTAAATGAGATTACTGCTCTTCTAAAACTCCCTCAACCCAACTTTTCTGTCTAACCCCATGACCTGAGTTAAGCTCGTCTTTGTGAAGGTTATTTCTGTGTTCAGTCATGTTAGAAAAGCCATATTGTTAGTTCACTTTTTGCTTAGACTGTTGTGAGCACCAGAGCACCCACCTCTGACCCTTACTTCAAAGGGGAAGACAGGAAACAAAGGATGATGGAACTAGCTTCTGactgaagaaactgggagggCATGAAATGAAAggtctttgtttccattttcctttagCTGTGGTGTAAGAGAATTGTACTAGGTTTGTCAGTTGTAGTAAACCTCTAGCCATTCTGCAGTTAAAACAGTTAAACTTGTGAAGAATTAATGTTGCTTTTTGGTGGGAAAAATTGCCATATCCAAcaccattcattcaataaacatttattcagcctTTTCTGA
>XM_016428184.1
ATAAGATCCAGAGCGAGGCTGCAGTTGCTAGTTGGTGTGCCCTTGCTTTGCATAtctctttctgttttctctctctctccctcgaCCCCGCCCGTCCGCGAGTTCGGAGTTCGATTGCGCGTGTCCCCATCCGTTTGTCCGAGTTCCCCACAGCTATCGCCGGCGCTGACCATGGAGCGGCTGACGGTAAAAGCCTATCTTATGGGCAAGGAGGAGACGGCCCGCGAGATCCGCCGCTTCACCTTGGACCCGGTCGACGGCCCAGGCCGCTGCGAGCAGCTTCTCCGACGCGTGGCCGAAGTGTTCCCGGCGCTGCGGCCCGGAGGCTTCCAGGCGTACTACCGAGatgAAGATGGGGACCTGATTGCTTTTTCCAGTGATGAGGAGCTAGGCATGGCCATGTGCTACATTAAAGAAGATATCTTGCGGATATATGTTAAAGAGAAAAAGGAGTGTAAACGGGAGCATCGTCCCCCTTGTGTCCAGGAGGTTCCCACCAACATGGTGCACCCCAACGTGATCTGTGATGGCTGCAATGGGCCAGTGGTGGGGAATCGCTTCAAATGTACCATCTGCCCTGACTACGACCTGTGCAACGCCTGCGAGGCCAAAGGCCTTCACAAAGAGCATAACATGATCCTCTTTCAGAATCCCTTCAACCACCCTGAGTGGATTTCTCGCCGACGTTGGCTTCAGAAGATGAGACATGGGCCGAATTTCCCAGCTTTTGGTGGATGGATGCCAGGCTGCTGGGGATTCTTTCCTCCTGATGCCCTGAATCAGATTGCTGCCCAGGCCCAAACGAACAGGACTCCCCCCAATACAGGAGCAGAACAAGCTAGTACCAGTTCACAACAGGACCCCAATGTCACCTTCCTGCAGAATGTAGGTGAAAGTGTGGCTGCTGCTCTTAGCCCTCTGGGGATTGATGTTGACATTGATGTGGAGCATGGTGGGAAAAGGAGCAAAGTGACTCCATCCTTCTCTCAGCCCAGCAGTGAGGAGAAGGGGAGCCCTCAACCAAGCAGTTCCTCCTCCAGTCAGAGCCAAGCAAGCACCCAAAATTCTGAAATGGAAATGACCCTCTCTGAGAAAATGCAGAAGATAATTTTGGCCTCTTGCATGCAAGTGGATAAGAATCCCTTAGCTCAAGAACAGACAGAGACTGGAAATTCTTCAGGAGGTGATGATGACTGGACTCACTTGTCTTCTAAAGAAGTGGATCCTTCCACAGGTGAACTTCAGTCCCTACAAATGCCAGAATCAGATAGTACAAACTCCATGGATCATTCTCCAGCGGGGCCTACAGGGCTCAGGGAAGCTGCATTATACCCACATCTTCCACCAGAAGCAGATCCTTGCTTGATTGAGTCGCTCTCCCAGATGTTGTCCATGGGCTTCTCCGATGAGGGAGGCTGGCTCACCAAACTCTTGCAGACCAAGAACTACGACATTGGAGCCGCTCTCGATGCCATCCAGTATTCCAAGCATGCACCCCATCCCTAAATGAGATTACTGCTCTTCTAAAACTCCCTCAACCCAACTTTTCTGTCTAACCCCATGACCTGAGTTAAGCTCGTCTTTGTGAAGGTTATTTCTGTGTTCAGTCATGTTAGAAAAGCCATATTGTTAGTTCACTTTTTGCTTAGACTGTTGTGAGCACCAGAGCACCCACCTCTGACCCTTACTTCAAAGGGGAAGACAGGAAACAAAGGATGATGGAACTAGCTTCTGactgaagaaactgggagggCATGAAATGAAAggtctttgtttccattttcctttagCTGTGGTGTAAGAGAATTGTACTAGGTTTGTCAGTTGTAGTAAACCTCTAGCCATTCTGCAGTTAAAACAGTTAAACTTGTGAAGAATTAATGTTGCTTTTTGGTGGGAAAAATTGCCATATCCAAcaccattcattcaataaacatttattcagcctTTTCTGA
>XM_016428185.1
ATATAAGATCCAGAGCGAGGCTGCAGTTGCTAGTTGGTGTGCCCTTGCTTTGCATAtctctttctgttttctctctctctccctcgaCCCCGCCCGTCCGCGAGTTCGGAGTTCGATTGCGCGTGTCCCCATCCGTTTGTCCGAGTTCCCCACAGCTATCGCCGGCGCTGACCATGGAGCGGCTGACGGTAAAAGCCTATCTTATGGGCAAGGAGGAGACGGCCCGCGAGATCCGCCGCTTCACCTTGGACCCGGTCGACGGCCCAGGCCGCTGCGAGCAGCTTCTCCGACGCGTGGCCGAAGTGTTCCCGGCGCTGCGGCCCGGAGGCTTCCAGGCGTACTACCGAGatgAAGATGGGGACCTGATTGCTTTTTCCAGTGATGAGGAGCTAGGCATGGCCATGTGCTACATTAAAGAAGATATCTTGCGGATATATGTTAAAGAGAAAAAGGAGTGTAAACGGGAGCATCGTCCCCCTTGTGTCCAGGAGGTTCCCACCAACATGGTGCACCCCAACGTGATCTGTGATGGCTGCAATGGGCCAGTGGTGGGGAATCGCTTCAAATGTACCATCTGCCCTGACTACGACCTGTGCAACGCCTGCGAGGCCAAAGGCCTTCACAAAGAGCATAACATGATCCTCTTTCAGAATCCCTTCAACCACCCTGAGTGGATTTCTCGCCGACGTTGGCTTCAGAAGATGAGACATGGGCCGAATTTCCCAGCTTTTGGTGGATGGATGCCAGGCTGCTGGGGATTCTTTCCTCCTGATGCCCTGAATCAGATTGCTGCCCAGGCCCAAACGAACAGGACTCCCCCCAATACAGGAGCAGAACAAGCTAGTACCAGTTCACAACAGGACCCCAATGTCACCTTCCTGCAGAATGTAGGTGAAAGTGTGGCTGCTGCTCTTAGCCCTCTGGGGATTGATGTTGACATTGATGTGGAGCATGGTGGGAAAAGGAGCAAAGTGACTCCATCCTTCTCTCAGCCCAGCAGTGAGGAGAAGGGGAGCCCTCAACCAAGCAGTTCCTCCTCCAGTCAGAGCCAAGCAAGCACCCAAAATTCTGAAATGGAAATGACCCTCTCTGAGAAAATGCAGAAGATAATTTTGGCCTCTTGCATGCAAGTGGATAAGAATCCCTTAGCTCAAGAACAGACAGAGACTGGAAATTCTTCAGGAGGTGATGATGACTGGACTCACTTGTCTTCTAAAGAAGTGGATCCTTCCACAGAAGCAGATCCTTGCTTGATTGAGTCGCTCTCCCAGATGTTGTCCATGGGCTTCTCCGATGAGGGAGGCTGGCTCACCAAACTCTTGCAGACCAAGAACTACGACATTGGAGCCGCTCTCGATGCCATCCAGTATTCCAAGCATGCACCCCATCCCTAAATGAGATTACTGCTCTTCTAAAACTCCCTCAACCCAACTTTTCTGTCTAACCCCATGACCTGAGTTAAGCTCGTCTTTGTGAAGGTTATTTCTGTGTTCAGTCATGTTAGAAAAGCCATATTGTTAGTTCACTTTTTGCTTAGACTGTTGTGAGCACCAGAGCACCCACCTCTGACCCTTACTTCAAAGGGGAAGACAGGAAACAAAGGATGATGGAACTAGCTTCTGactgaagaaactgggagggCATGAAATGAAAggtctttgtttccattttcctttagCTGTGGTGTAAGAGAATTGTACTAGGTTTGTCAGTTGTAGTAAACCTCTAGCCATTCTGCAGTTAAAACAGTTAAACTTGTGAAGAATTAATGTTGCTTTTTGGTGGGAAAAATTGCCATATCCAAcaccattcattcaataaacatttattcagcctTTTCTGA