Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chrUn0004) and its retrocopy(ies). Each line represents a retrocopy.
Specie Oryctolagus cuniculus
Full Name N/A
Also known as -
Coordinate chrUn0004:885919-892032
Strand -
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P1 chr1:149743012-149743303 - Intragenic
N/A UCSC
HMGB1P5 chr2:160742175-160742350 - Intergenic
N/A UCSC
HMGB1P12 chr7:163651467-163651854 + Intragenic
Intragenic
N/A UCSC
HMGB1P13 chr7:2311511-2311690 - Intergenic
N/A UCSC
HMGB1P17 chr11:81094695-81095016 + Intragenic
N/A UCSC
HMGB1P26 chr13:79655568-79655942 + Intergenic
N/A UCSC
HMGB1P30 chr14:4207363-4207647 - Intergenic
N/A UCSC
HMGB1P31 chr14:7474324-7474672 + Intergenic
N/A UCSC
HMGB1P36 chr17:8708696-8708860 + Intergenic
N/A UCSC
HMGB1P37 chr18:34448273-34448534 + Intragenic
N/A UCSC
HMGB1P38 chr18:37291519-37291846 + Intergenic
N/A UCSC
HMGB1P39 chr18:42159017-42159283 + Intragenic
N/A UCSC
HMGB1P42 chrX:34007820-34008346 + Intragenic
N/A UCSC
HMGB1P2 chr1:47756193-47757439 + Intragenic
ENSOCUG00000000524 UCSC
HMGB1P16 chr11:43607011-43608178 - Intergenic
ENSOCUG00000026247 UCSC
HMGB1P24 chr13:30373943-30375143 + Intergenic
ENSOCUG00000022718 UCSC
HMGB1P28 chr14:1233019-1234228 - Intergenic
ENSOCUG00000024061 UCSC
HMGB1P29 chr14:14398271-14399443 + Intergenic
ENSOCUG00000004133 UCSC
HMGB1P32 chr15:28740175-28741369 - Intergenic
ENSOCUG00000032687 UCSC
HMGB1P14 chr8:38371786-38373740 + Intergenic
ENSOCUG00000035158 UCSC
HMGB1P3 chr1:75906751-75907053 - Intergenic
N/A UCSC
HMGB1P4 chr2:112618052-112618606 - Intergenic
N/A UCSC
HMGB1P6 chr2:19666490-19666966 - Intergenic
N/A UCSC
HMGB1P7 chr3:74055021-74055581 + Intragenic
N/A UCSC
HMGB1P8 chr3:88486958-88488428 + Intragenic
N/A UCSC
HMGB1P9 chr4:91271898-91272561 + Intragenic
N/A UCSC
HMGB1P10 chr5:24016898-24017866 + Intergenic
N/A UCSC
HMGB1P11 chr7:100674059-100675201 - Intergenic
N/A UCSC
HMGB1P15 chr8:39065213-39065713 + Intragenic
Intragenic
N/A UCSC
HMGB1P18 chr12:110781130-110782263 - Intragenic
N/A UCSC
HMGB1P19 chr12:117742706-117743983 + Intragenic
N/A UCSC
HMGB1P20 chr12:59448112-59448828 + Intergenic
N/A UCSC
HMGB1P21 chr13:115282414-115282799 - Intragenic
Intragenic
N/A UCSC
HMGB1P22 chr13:12941333-12942793 - Intergenic
N/A UCSC
HMGB1P23 chr13:14329649-14330096 + Intergenic
N/A UCSC
HMGB1P25 chr13:38429142-38429824 - Intragenic
N/A UCSC
HMGB1P27 chr14:11078529-11079226 - Intergenic
N/A UCSC
HMGB1P33 chr16:44983082-44983640 - Intergenic
N/A UCSC
HMGB1P34 chr17:15473885-15474448 - Intragenic
N/A UCSC
HMGB1P35 chr17:51398933-51399638 + Intragenic
N/A UCSC
HMGB1P40 chr19:25830422-25830877 + Intragenic
Intragenic
N/A UCSC
HMGB1P41 chr20:22099203-22100392 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001171281.1
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCCGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAGGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCTCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCGCCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTCTGTTCTGAGTATCGCCCCAAAATCAAAGGAGAGCATCCTGGCCTGTCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCCTACGAGAAGAAGGCTGCCAAGCTGAAGGAAAAGTACGAGAAGGATATTGCTGCATACCGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGAGTCGTCAAGGCTGAAAAGAGCaagaaaaagaaggaagaggaggaggatgaagaagacgaagaggatgaggaggaagaggaagacgaggaagatgaagatgaagaagaagaTGATGATGATGAATAA
>XM_008273516.2
AGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGAAAAATAACTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCCGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAGGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCTCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCGCCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTCTGTTCTGAGTATCGCCCCAAAATCAAAGGAGAGCATCCTGGCCTGTCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCCTACGAGAAGAAGGCTGCCAAGCTGAAGGAAAAGTACGAGAAGGATATTGCTGCATACCGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGAGTCGTCAAGGCTGAAAAGAGCaagaaaaagaaggaagaggaggaggatgaagaagacgaagaggatgaggaggaagaggaagacgaggaagatgaagatgaagaagaagaTGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGACGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAAAAAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTCATAGGTCTGAAATTTTTCTTCTTAAGGGGAAGCTAGTCTTTTGCCAATTTTGGATCACATTAATTATTACAGTGTTTTCTCTTTTCATGTAGTTAGATAAAAAGCTTTTGTCTACACACCCTGCATATCATGATGGGGTAATAGAAGTTGAATTGAGATCGCTGTCATCGGTAACTGAAACGACAAAATCTTGATCAGCTGATAACAGATTTCACATAACCCACTTACATTTACGAGTGAAGAGTAACCAGTCTGTTCATAGCATGGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAGTAGAAAAGTATGTTCTAATCTTTACCTGAGGATTCTATATTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATAGGAAGTAGTTTTTGTTGTCCATTAGTCCTGGTGAAGGCTACGAAAGTGCTGGCTGTCCATGTCTCTCCCATTTATCTAAATATGGACTGCTCAGGAAATATGAGACTCCATTAAAAGTAGCTTTAATTAACTGGGCCAGCTTTTTGAAATGATGAAGCCACATTCAAAGGAGGGTATATTTTCCTATATTGTGGCTTGCCCCTTTATTAAATCAAGTGGCCACTTGAGAAGAAAGACACTTAAAACTTAGTGTCTCGTGTGAGTTATCCAATTTATTTGATTTTTCTTTACAAAATCCAAGCTCATTCATTACAGTCATGTTTATCTACTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTTGAGATTATCGTTCTCTTAAAGTGCCAGTGTTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTGATGTAATTTCAGGAGGAACACTGAACACCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAATATTA