Summary

Gene Name	H3f3a
Specie	Rattus norvegicus
Full Name	H3.3 histone A
Also known as	-
Coordinate	chr13:99091246-99102828
Strand	-
Gene summary	Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and nucleosomal DNA binding activity. Predicted to be involved in DNA replication-independent chromatin assembly; nucleosome assembly; and positive regulation of cell growth. Predicted to act upstream of or within several processes, including gamete generation; heterochromatin organization; and negative regulation of chromosome condensation. Predicted to be located in Barr body and chromosome, telomeric region. Predicted to be part of nucleosome. Orthologous to several human genes including H3-3B (H3.3 histone B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from H3f3a

Retroname	Coord	Strand	Genomic Region	ENSG
LOC100361558P1	chr1:101501558-101501842	-	Intragenic Intragenic	N/A	UCSC
LOC100361558P2	chr1:115884781-115885502	+	Intergenic	N/A	UCSC
LOC100361558P3	chr1:178812883-178813892	+	Intragenic	N/A	UCSC
LOC100361558P4	chr1:52097885-52098799	-	Intergenic	N/A	UCSC
LOC100361558P5	chr1:63301270-63301754	-	Intergenic	N/A	UCSC
LOC100361558P6	chr1:68276862-68277346	-	Intergenic	N/A	UCSC
LOC100361558P7	chr1:89277974-89278719	-	Intergenic	N/A	UCSC
LOC100361558P8	chr2:122726596-122726860	+	Intragenic	N/A	UCSC
LOC100361558P9	chr2:157854606-157855592	+	Intergenic	N/A	UCSC
LOC100361558P10	chr2:177934521-177935520	+	Intragenic	N/A	UCSC
LOC100361558P11	chr2:243755920-243756904	+	Intragenic	N/A	UCSC
LOC100361558P12	chr2:258006429-258007098	-	Intergenic	N/A	UCSC
LOC100361558P13	chr2:53911051-53912069	-	Intragenic	N/A	UCSC
LOC100361558P14	chr2:78273301-78274323	-	Intragenic	N/A	UCSC
LOC100361558P15	chr3:142365179-142365446	+	Intergenic	N/A	UCSC
LOC100361558P16	chr3:145305765-145306895	-	Intergenic	N/A	UCSC
LOC100361558P17	chr3:146263139-146264148	+	Intergenic	N/A	UCSC
LOC100361558P18	chr3:21606367-21607136	+	Intragenic	N/A	UCSC
LOC100361558P19	chr4:170289334-170290356	-	Intergenic	N/A	UCSC
LOC100361558P20	chr5:134194530-134195505	+	Intergenic	N/A	UCSC
LOC100361558P21	chr5:151033648-151034462	+	Intergenic	N/A	UCSC
LOC100361558P22	chr5:2184774-2185537	+	Intergenic	N/A	UCSC
LOC100361558P23	chr6:103626344-103627133	-	Intergenic	N/A	UCSC
LOC100361558P24	chr6:118233292-118234150	-	Intergenic	N/A	UCSC
LOC100361558P25	chr6:684788-685670	+	Intergenic	N/A	UCSC
LOC100361558P26	chr7:130516516-130517018	-	Intragenic	N/A	UCSC
LOC100361558P27	chr7:59919483-59920475	-	Intergenic	N/A	UCSC
LOC100361558P28	chr7:83864107-83865064	+	Intergenic	N/A	UCSC
LOC100361558P29	chr8:17427558-17428463	-	Intragenic	N/A	UCSC
LOC100361558P30	chr8:64518462-64519304	-	Intragenic	N/A	UCSC
LOC100361558P31	chr10:16465584-16466351	-	Intergenic	N/A	UCSC
LOC100361558P32	chr10:17534308-17535075	-	Intergenic	N/A	UCSC
LOC100361558P33	chr11:55304514-55305344	-	Intergenic	N/A	UCSC
LOC100361558P34	chr11:81409561-81410391	-	Intergenic	N/A	UCSC
LOC100361558P35	chr13:23508132-23509150	-	Intergenic	N/A	UCSC
LOC100361558P36	chr14:21048176-21049188	-	Intragenic	N/A	UCSC
LOC100361558P37	chr14:45773735-45774557	-	Intragenic	N/A	UCSC
LOC100361558P38	chr15:19575025-19575984	-	Intragenic	N/A	UCSC
LOC100361558P39	chr15:20335661-20336407	-	Intergenic	N/A	UCSC
LOC100361558P40	chr15:28059510-28060485	-	Intergenic	N/A	UCSC
LOC100361558P41	chr16:2060073-2060948	+	Intergenic	N/A	UCSC
LOC100361558P42	chr16:22293667-22294681	-	Intragenic	N/A	UCSC
LOC100361558P43	chr16:7924582-7924950	+	Intergenic	N/A	UCSC
LOC100361558P44	chr17:24072104-24073044	+	Intragenic	N/A	UCSC
LOC100361558P45	chr17:45547794-45548330	-	Intergenic	N/A	UCSC
LOC100361558P46	chr17:5361183-5361714	-	Intergenic	N/A	UCSC
LOC100361558P47	chr19:14682479-14683371	+	Intergenic	N/A	UCSC
LOC100361558P48	chr19:54872254-54873076	-	Intragenic Intragenic	N/A	UCSC
LOC100361558P49	chr20:37924243-37924950	+	Intergenic	N/A	UCSC
LOC100361558P50	chrX:122993331-122993980	+	Intergenic	N/A	UCSC
LOC100361558P51	chrX:143215407-143215686	-	Intragenic	N/A	UCSC
LOC100361558P52	chrX:159607462-159608381	+	Intergenic	N/A	UCSC
LOC100361558P53	chrX:17200126-17201020	+	Intragenic	N/A	UCSC
LOC100361558P54	chrX:1825025-1826147	+	Intergenic	N/A	UCSC
LOC100361558P55	chrX:38220410-38221201	+	Intergenic	N/A	UCSC
LOC100361558P56	chrX:48515276-48515453	-	Intergenic	N/A	UCSC
LOC100361558P57	chrX:54149650-54149792	+	Intergenic	N/A	UCSC
LOC100361558P58	chrX:58556576-58556931	+	Intergenic	N/A	UCSC
LOC100361558P59	chrX:64486520-64487608	-	Intergenic	N/A	UCSC
LOC100361558P60	chrX:74545741-74547261	-	Intergenic	N/A	UCSC
LOC100361558P61	chrX:78626517-78627267	+	Intergenic	N/A	UCSC
LOC100361558P62	chrX:92633856-92634393	-	Intragenic	N/A	UCSC

Expression

Transcript Sequences

>XM_002728043.3

AAAGCCTCGGTGTCAGCCATCTTTCAATTGTGTTcgcagccttcgccgcgccgccgccgctctctaacgccagcgccgccTCTTGCTTGCTGAGCTCCAGCCGAAGGAGAAGGGGGTAAGTAAGGAGGTGCTCATACCATGGCTCGTACAAAGCAGACTGCCCGCAAATCCACTGGTGGTAAAGCACCCAGGAAACAACTGGCTACAAAAGCCGCTCGCAAGAGTGCGCCCTCTACTGGAGGGGTGAAGAAACCTCATCGTTACAGGCCTGGTACTGTAGCACTCCGAGAAATCAGACGCTATCAGAAGTCCACTGAACTTCTGATTCGCAAGCTCCCCTTTCAGCGTCTGGTGCGAGAAATTGCTCAGGACTTCAAAACAGACCTGCGCTTCCAGAGTGCAGCGATTGGTGCTTTGCAGGAGGCAAGTGAGGCCTATCTGGTTGGCCTTTTTGAAGATACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGCGGAGAACGTGCTTAAGAGTCCACTATGAGGGGAAACATTTCATTCTCAAAAAAAAAATTTTTTTTTCCTCTTCTTCCTGTTATCAGTAGTTCTGAATGTTAGATATTTTTTCCATGGGGGTCAAAGGTACCTAAGTATATGATTGCGAGTGGAAACATAGGGGACAGAATCAGGTATTGGCAGTTTCTCCACGTTCATTTGTGTGTGAATTTTTAATATAAATGCAAGATGTAAAGCATTAATGCAAGCAAAATGTTTCAGTGAACACATTTCAACAGTTCAACTTTATAACAATTATAAATAAACCTGTTAAAATTTTCTGGACAATGCCAGCATTTGGATTTTTTTAAAATAAGTAAATTTCTTATTGACAGCAACTAAATGGTGTTTGTAGCATTTTATCATACAGTAGATTCCATCCATTCACTATACTTTTCTAACGGAGTTGTCCTACATGCAAGTACATGTTTTTAATGTTGTCTGTCTTCTGTGCTGTTCCTGTAAGTTTGCTATTAAAATACATTAAACTATA