Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps4x
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S4, X-linked
Also known as -
Coordinate chrX:72074108-72078551
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in response to ethanol. Located in ribosome. Orthologous to human RPS4X (ribosomal protein S4 X-linked). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps4x

Retroname Coord Strand Genomic Region ENSG
Rps4xP1 chr1:150793124-150793336 - Intergenic
N/A UCSC
Rps4xP2 chr1:252001217-252002119 + Intragenic
N/A UCSC
Rps4xP3 chr3:113660335-113661157 + Intragenic
N/A UCSC
Rps4xP4 chr4:182745498-182745978 + Intergenic
N/A UCSC
Rps4xP5 chr4:35729626-35730535 - Intergenic
N/A UCSC
Rps4xP6 chr5:131972535-131973761 + Intergenic
N/A UCSC
Rps4xP7 chr5:162482854-162483749 - Intergenic
N/A UCSC
Rps4xP8 chr5:1731395-1732286 - Intergenic
N/A UCSC
Rps4xP9 chr10:12780068-12780918 - Intergenic
N/A UCSC
Rps4xP10 chr10:46814690-46815250 - Intergenic
N/A UCSC
Rps4xP11 chr10:55523746-55524678 + Intergenic
N/A UCSC
Rps4xP12 chr13:18614745-18615535 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001007600.2
CTCCGACCCTAATTTCTTCGTTCGCCGGAAGAAGGCGAGTCTCTTTCCGTTCCCAGCGCAGCCATGGCTCGTGGTCCCAAGAAACATCTGAAGCGCGTAGCGGCTCCAAAACACTGGATGCTGGATAAGCTGACTGGCGTGTTTGCTCCTCGTCCATCCACTGGTCCACACAAACTGAGGGAATGCCTGCCTCTGATCATTTTCCTAAGGAACAGACTTAAGTATGCCCTGACTGGAGATGAAGTAAAAAAGATTTGCATGCAGCGATTCATTAAGATTGATGGGAAAGTCAGGACCGATATAACCTACCCTGCTGGGTTTATGGATGTCATCAGCATTGACAAGACTGGAGAGAACTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTTCATCGAATTACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAGATCTTTGTGGGCACAAAAGGAATCCCACATCTGGTGACCCATGATGCCCGTACTATTCGATACCCTGATCCCCTCATCAAGGTGAATGACACCATTCAGATTGATTTGGAAACAGGCAAGATAACTGATTTCATCAAGTTCGACACTGGGAACCTGTGTATGGTGACTGGAGGTGCTAACTTGGGGAGAATTGGTGTAATCACCAATAGGGAGAGACATCCTGGCTCTTTTGATGTGGTTCATGTGAAAGATGCCAACGGCAACAGCTTTGCCACTCGTCTTTCCAACATTTTTGTTATTGGCAAGGGCAACAAACCGTGGATTTCTCTTCCCCGAGGAAAAGGAATCCGCCTTACCATTGCTGAAGAGAGAGACAAGAGGCTAGCAGCCAAACAGAGCAGTGGGTGAAATGGTCTCTAGGAGACATGCTGGAGGAGTATTTGTACTCAACACAACAAGCCTTTCTAAGCAACATGCTAGATTAAACAGCATGATGAAATCA