Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Nt5c2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name 5'-nucleotidase, cytosolic II
Also known as -
Coordinate chr1:266652966-266782935
Strand -
Gene summary Enables 5'-nucleotidase activity. Involved in IMP metabolic process and adenosine metabolic process. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 45. Orthologous to human NT5C2 (5'-nucleotidase, cytosolic II). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nt5c2

Retroname Coord Strand Genomic Region ENSG
Nt5c2P1 chr1:42991498-42993808 + Intergenic
 N/A UCSC
Nt5c2P3 chr6:81355053-81356955 + Intergenic
 N/A UCSC
Nt5c2P2 chr2:127106832-127108257 - Intergenic
 N/A UCSC
Nt5c2P4 chr19:32077751-32078791 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006231583.3
tctcccaaaggatcccaacacctacatagcagctcataacagtatgcagctccagttctgggtcatccggtgctgtcttctggcctcaaagagcaccagAATTCATCCTACAAATAAAATGATGACTTCCTGGAGTGACCGCTTACAGAACGCAGCAGATGTGCCTGCTAACATGGATAAGCATGCCCTGAAAAAGTACCGTCGAGAAGCCTATCACCGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGGTTTGACATGGATTATACCCTGGCTGTGTACAAGTCTCCGGAATATGAATCCCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTGTCCATCGGCTATCCTCAGGAGCTGCTCAACTTTGCATATGATTCGACATTCCCTACCAGAGGACTTGTCTTTGACACACTCTATGGAAATCTCTTGAAAGTTGATGCCTATGGAAACCTCTTGGTTTGTGCACATGGATTTAACTTCATAAGAGGACCAGAAACTAGAGAGCAGTATCCAAATAAGTTTATCCAACGAGATGATACTGAACGGTTTTACATTCTGAACACACTCTTCAACCTTCCAGAAACCTACCTGTTGGCCTGCCTAGTAGATTTTTTTACTAATTGTCCCAGATATACCAGTTGTGACACAGGATTTAAAGATGGGGACCTCTTCATGTCCTACAGGAGTATGTTCCAGGATGTAAGGGACGCAGTGGACTGGGTCCATTACAAGGGTTCCCTTAAGGAAAAGACAGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGCAAGTTGCCGTTGCTTCTGAGCCGAATGAAGGAAGTGGGGAAAGTGTTTCTGGCCACTAACAGTGACTATAAGTACACAGATAAAATCATGACTTACCTGTTTGATTTCCCACATGGCCCCAAGCCTGGGAGCTCCCACCGGCCGTGGCAGTCCTACTTTGATCTGATTTTGGTGGATGCACGGAAACCGCTCTTTTTTGGAGAAGGCACAGTGCTGCGTCAGGTGGACACTAAAACCGGAAAACTGAAAATCGGCACCTACACGGGCCCCCTGCAGCATGGCATCGTCTACTCAGGAGGTTCATCTGATACAATCTGTGACCTGTTGGGAGCTAAGGGCAAAGACATTTTGTATATTGGAGATCACATTTTTGGAGACATTTTGAAGTCAAAGAAACGGCAAGGGTGGAGAACTTTCTTGGTGATTCCTGAGCTTGCACAAGAGCTGCACGTCTGGACTGACAAAAGTTCACTTTTTGAAGAACTTCAAAGCTTGGATATTTTCTTGGCTGAACTCTACAAGCACCTGGACAGCAGCAGCAACGAGCGCCCAGACATCAGTTCCATCCAGAGACGGATCAAGAAAGTGACTCATGACATGGACATGTGCTACGGGATGATGGGAAGCCTGTTCCGCAGTGGCTCCCGGCAGACGCTCTTTGCCAGCCAAGTGATGCGGTACGCTGACCTCTATGCAGCATCCTTCATCAACCTGCTGTACTACCCATTCAGCTACCTCTTCAGAGCGGCCCACGTCCTGATGCCGCACGAATCAACAGTGGAGCACACACATGTGGATATCAATGAGATGGAGTCCCCTCTCGCCACCCGCAACCGCACATCGGTGGATTTCAAAGACACTGACTATAAGCGACACCAGCTCACGAGGTCCATTAGTGAGATCAAGCCTCCCAACCTCTTCCCTCTGGCTCCCCAGGAGATCACACACTGCCATgatgaagatgatgatgaggaagaggaagaggaagaATAAGGCAGACTGAAAACCCTGAGCACCCATCAAGTCTGACGGACTCGTGGGGGCAAGGGGCAGATTGTTTGGATTGTTAGGGAGGGTGGGAGGACTCCATCAGAAGCACGTTTGGAAAGTACGTTTCTGAAGGCTTTAAATAATTCTAATCATAGCTACTTCAGTTTTGTGTATCTGTATTCTCTGCAGATGGTTTGAAACTGCATAGGAAGAGCAGGTAAAGTCAGGTGGAATGCATGCAGACGGCACCATGTGGCTTGGGATGGTTTCTGTGCCTGTCGTCGTGTCATCTGGATGCACGAAGGTAGTAAAAGGTTCAGAGCAGAGGGGCTGATGGGAAGAGGAGACCCACAAATGCTGTGTACAAACTGTACCATTGCTCCAATCCCACCCGGCCTGTGCGTCACAGTTGCTCACCAGTGGAGAATACACACTTTTATCACCAAGTGTAGTCAGCCTCTGTTGAGGTCAAGTTTCCCTCCGTTAGCTTTTGGGTTTCCTCGGCCCTGGCGAGGCTGGTGCTGTGTCAGTCAGTGCCTTTGTGGGTTTCCTTGCTGTAGGACGATTCTAGACTGCAGGGATTTGAATTTGAGGCAAAAGTCCTCATCCTTGCTACATTTTTTAAAGTTGGTAGCACAAATGCTTTGTGTTACATAAAACCAATCCTTTTGGGGAATGTAGCTGAGGAGTACAAAGGAGCAGGTTCCCAGAACAGCAGCCACTGTCACAGCCAGAGCTGCCTTCAGCAGCGTGGCCTGCTCCCAGCCACAGAGACGGGAAGGCTCTACAGCAGAAGGGACAGAGGGGATGAGTTCACTCGACTGGGAAATGACCTCTGGCTCTGAATAAAGCAGGAGCCTGTAAACACGAAGGTTGTGACTTCCAACCATGACTTGTGTTGTAGAACTTGCTCTAACTTTTGTTTTCTTCCATTCTTGGCTCTGGTCACTAGGGTATTGACTGCTCTAGAGCTCAGTAAAGTGTGTGTCTAATGCTGACACTGGCCCTGTGCAGTACAGCTGTCAACAGTCATAGCCATGGTCTTCAGATGGCTTAGGGTTGGTGTTAAAATTGCTAGGTATATCTGTATCACTTTTAGTTAAAAACATGCTTATATGTACAGTGTTTCACAGGTATAAAGATTTTTTCACTGAGGTTTTAGCAttttttaaaaagacttaagtttctgtagccctggttgtcctgggacatgttcagtatgtagatcagactgaccttgaactcagagagctgtgagtgcctgcctctgcctcccaaatgctggaattaaaggcatgcaccacgcctggctTATTTTAAAGCACTCATTTGGAAGGTGTGGAACACAGCCAGCTCAGCACCTTAGCCCAGGCCTGCAGCCACACAGCTTCACTCACTTAAGAGTCAGTCATCCAAGTAACTGCATTCCGGCTGGAACTTATCCGTGGACAATTAATTGGTTGTTATCTCTGTTTTTAAAAACTTAGAGACTATTATAGCCCCCCTAGTTATCATTCATTCTCATTTAAATTGACATTGAGGATGTTGCTTGGGTTGACGGTGTTAAGCCCTCTCAAGCCCAAATCACCTCTGCAGGGCACGTGACAACTGCAGAGTCACCTTATGTTAGTGTGCTCCTTAGAGCAGAGGTGGACGTCACTCAGCTTGCTTCCTATGTTTTATTGTGTTGTGTGGACACAACAGTTTGTTATTGCCAGATGGCACTGTCAGCCAGGCGACTCACCAGAGGAGAGAGCGCACTTCGAGTGGCAGTGAAGAGCGCACAGTCGAGAGAACTCCTTGTTGAGTCAACTTTCTTCAGTCAGCAGGAGCTGCTAATGAGCTAGAGCTCTGTAAGGGACAGACCAGCTGGTGACCTCCCGAACGCCCCCGTCTGTGCTGGGTGGTCTGTCCAGCGCAGGTGACGAAGCATCTGTGACTGGACATTTCAGAATGTAAAACATGAACTGTCTGTCATCAGTGGACTGCCCACTTGTTTGCTTAAGTCTGTGCGCTTTAGAGGACAAGAGTGGCAGCTCCATCTCCCCTGGGAGCTTCCCTAGGGGTTCTGGAAACACCTCAGTTTTCAGGCCTTGTAGAGCATCAGAATCCAAGAATCGTTTCTTCAGTGCCAGACTACTGAGCTCCCAAGACTGGAGTGTGTGGCACTAGGGACCCCAGTGTTCCCAGTCCTGCTGGGTCTCCCAGCCACAGCAACCACCTCATGCATCCTTCCACAGAGCTGCTCTAGTAGAAGGTTGAATGTCTCAGAAACATCTGAGGCAGAGAAAATTCAGTGTTTGTTTTATACCCAGGATTCTCGTTTGCCATAGCACAGATCTGCAGAGGTCTATGGTGTAAGCTATGCCCCTTCACGTTGCTTTTAAATTTTAAAATAGAATAACAGCTACAAATCTTTAGGTCACATTGTGTATGTGCGATTACATTTCAGATTTAAAAGTAGCTTGTCCATGTTTAGATACTTATAAGTCAGACTTGTTTGTGTAACAACTTTGAAGTCCTGCAGTTTTTCTAAGGCTTCCTGGGCACTGTTAAACCCTCTGCTTACTCACCATAACTAGCCTGAGGTAGACACTGCATATTTAAGTCTGTATTAGGACAGAGACTTGCTCACACTCCCCGTTATGGAAACTGTTTAACCTCCTCCTGACGGTGGGAAAATGGTAATGAAGAGCCGTCTGCTGCCATACTCTCAAGGGCCTCCTTCCTTCCCCATGTGGTTTGAGAGTTAGGCCCTCAGTACTTAGTTTCTCATGGCATTCTTTCTTGGTGACTAGAATTAGCTTCTCTTACAGTTTTTCCTCAGAGGGAATGATTTCTAATCACATACCCTTGGGATGCCTGAGTCTGGAATCCTCACCAAAGACGAAACAAAAGCATGCGCTGTAGTGAGATGCGGAGATGATCCACCCTCGGGCATGCCAGTGAGCTACACGGATGATCTACATGCATGCGACAGCCAAAACAGAGCCCAATGATTGCAGACCCGCATTGCCTGCCAGACCCCTCTGCTAACAGGGGAACAGCACCTAACGGCCTAACTGCTGTCCAGAAAAAGCAGGAAGCAGGTCTAAACGGATATTCATTACAGAACATGCAGCCTTCTCCTCCTTGCTTTCCCCCTGCTTCTCAGCTTGTGGTAACAACAGTGATGAAGGTGTCTGACACAAGAGTAAAGGAAGAGATGAGTATTTCAACTCCCAACACCCATCTCAGACTTGGACACCACATGTCTAAGTATTCGGGATTTTCCAAGAAAATAAAATTCCCAGTTTTGAGCCTGACCTTGAGGTCTCTTTACACGGGGTACAGTACCCAAACTGCCTTGTTGCTAGAGGAAGAGCAGGGAGCTGTTGACACTTCAGCTCTTCCCAGGGGACCTCCAGATGAGACCCGGAGGACTGGAGCAAGACTCGGAGCCTGCGTACTGCACACATTGTCACCATGGAAATAGCGATGATCCTTCAAGCCTCAGGTTTAGAGTAAGTGGCCATTCCTTACTGAGAGCTTTTTTTTTTCCCCTGGGGGAGGCAGGGtttgagtcagggcttctctatgtcgcaagccctggctatcctggactcactttgtagatcaggctcacaaatccacctgcctctgagaggttcttagcagagttaaccttggatttgaaggtatgcgATTTAAGCATGTGATTGCCAAAGTCTGATGGAGAATTGGGCTCAGTCTCATTTCTTGTCTTGCCTGCTTGTCTCCTGTGCTTTCAGGACCTCAGGGCCACTAACAGCAGCAGGAAACGCTTCACCATATTTATTCCCCTTCAGGTCATCTACCAGGTCAAAAACGACATTTAAGACAAGGTCCATATAACCAATTCCTTTATCCTAGGACTTACAGAACATTCATACCTGGGAGTTATGAGCACAGATACGGCCCTCGGAAGGAAAATGAAATCACGTTGCAAGAGGGTAAATAGCAATCTAATTGAACCTTTTGGACATTAACGAGGGATATGTCATTAGATTGCATTGCCTTCAAGAAATGTAAGACAGGAgggcatgtagctcagtggtggaacacttgcctgacCCTGTGCAGTTGCCAGAAGTCACTGCCGGGCTAGGGGACGTTCCTGCTGCCCTGTAGACTCTCCAGGGTCCTCCTGCTTTGTATCTGTGTCCTTGAAGCACTGAGCTTAGTAAAGCTCAGAGATGAACAGGCACAGGAGTGTGACAGGAGGCCCAGCGTTCCTCACAGCACAACTACCTCCATATTCCTAGGGCAttttctgatgctctgccatctctttcttttttcttttttttttttttttggagctggggaccgaacccagggccttgtgcttcctgggcaagcgctctgccactgagctaaatccccaacccGCTCTGCCATCTCAAGAACCGTCTAGACAAAGATCCAGCCACAGTGGTTAGTCCAGAGGGCACTGCCATGGCCATCTTCCTGCCCTGATGATCTGTGCCCTGTGTCTAGGGAAAGAGCTAGACACTTGACCAGGGTATGGGTGCATTCATTCTCCTTCCAGGAAATGATCAGACAGACAGGGTTTAAAGTCAGTCTTGTCAGTATGCCACTGAAACGTTCCCACACAGGACAAGGGTGAAGACAGACATCACGGTCAAATGCAGTAGGGACTCTTGAGCCCCTCGAAGCCTGATTCTCAGCATGGGCTTGTTTGGCATGTGAAGTAAAATTAAAGGATTTCAGGAAGGGGCAGCCAATTCGTGGATTCACCAAGCACCTTAAAACTCAGCCAGAAGATGTGGGTCTTGTCACCCAAGTGACAACAAAAGATGAGGGTCATTCTTAGGTATGTGCCTCCCATACCTGTGGCCTTGAGTCACTTCAGGGTGACTCACCCGAGAGCCGATGTTCCTCACTGGTTTGGAGGACTTAAATAGCCAGGCTCATCTACAGGAGCCAACTGAAAAGAAGCCTGTGCAGAGGAGCGTACTACTGCCAAGGGAAACCTTATTTCCCTCTGCCTCGCTGCTGTGTGCCTGGGCAAGTGCAGTGGAGACTTCTGTTGTTTCCTAGCTGATGAGGGCAAACCTCATTCCTTGGAAGAACATCCCCAGAACCAGCTGTACCAGGCTGTAACACTCAACTTGCATTTCCATAAACAAGAGACTTTGCAACGTCTGTCCTAAGGAGAGGCCCCGATGTGATTCAGTCCCAAACTTTCCCACCAGTAAAGCCATGTAATTGGGCAGGGGACCAAGTGTGAAGGAAACAAGGTAGGTGGTATTACACAGAGGAAAGAGGGAACACACAGCTGCTAAAAGGGTGAACAGAAAATCATTTATCTAAATAGAATAATAGAAATGAACAAAACCTTTTAAAAACAATCACAAGATTTACAAATAAATTGGTACAAATAAATAGGTATTGTAAATCTACAACATTTGAATTATAAACGCGTCCGTTATGACAGCTTGTGAAGTTTGTGCACGTGACCTGTGTTTAGTTTTCCATTGATGTCACTGCTCAGATGCATGAAATGTACGCTGTGGTACAGTGGGTACAGCTGAGGAGGATGGAAATCAGACAATTACGTTAGGCCCAAGGCAATGTTGGTAACTGTACCATAACACCGGGAAGGGCCATATTCGGAGCCTAGATGGGCAGCTTCCATTGCAGATAGAGTCTGCAGTAAAAGTTGAGGAGTAGAGGCCATCAGTCTGGGACCAAGAAGGTGATCTGGCTTGTGTGTGGATGAGGACAGAAGCTCTGGTCTCAGCCATATGCTACCACTGCATAGGAAGGAGACCCAACCACCATAAAACCACTTCTGCGGTAACGCATGGAGACAGAAGCACTGCCTCCATCCACCTCCCAAATACGGGCCATCAGGAATGAGTGGGTAAGGCAATGAAGGAAGCTGTGTAAAAGCAGCAATATGGGTGGGTTTTTTCCTTTTAAACAAAAAGATACCACCACCCTCTCACCCGATAAGGAACAGCAGAACACTAGGCTCAATGGATGAGGGGCTTCAAAACAGTGTCTTAGTCACAAatgatatactaacatagagacatatgtacataataaataatataaaataaagcatataCATTTGTGGACTCAAAGGACTGCAGAAATAAGAAAAGTCAGTAGGTTGATGAGACTCTTCACAGTAGACCTGACATGGGGAGTCGTGAGTCAGAAGCTAGGGGGCTCTCCAGGGAATGAGTCTTCGCTTCCCTTGGTTCTAGAGGTCTGGGACCCCAGCAGTTTCTATGTGAGAAACCTGAGTCTCCAAGAAGAGCAGGCACTCAGGTCTGTCAGGCCCCTTTGATAGTTATCTTTTGGGCGACTCGAAGAATCCAGCCCCAGAAGCAAATCCGCATGGATCACATGTGAGCAACATCAGAACATACCCTTCTAAGTGAAACTGGACAGAACCCCGAAACATCGTCATCTGAAAATGCTGACCCATATCTCTCCCACCTTCCAGCTGTGTATATAAAACGCTAGAACCTGACTCTTGCCGTTTTTGCTTCAAGTA
>XM_006231586.3
GGCGGGGGCGGGGAGGGCGCGCGCCGAGGCGGCTGCGGCAGTTGCGCGCTAGGATTGCTGCCGTGCGGTGGGGCCGAATTCATCCTACAAATAAAATGATGACTTCCTGGAGTGACCGCTTACAGAACGCAGCAGATGTGCCTGCTAACATGGATAAGCATGCCCTGAAAAAGTACCGTCGAGAAGCCTATCACCGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGGTTTGACATGGATTATACCCTGGCTGTGTACAAGTCTCCGGAATATGAATCCCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTGTCCATCGGCTATCCTCAGGAGCTGCTCAACTTTGCATATGATTCGACATTCCCTACCAGAGGACTTGTCTTTGACACACTCTATGGAAATCTCTTGAAAGTTGATGCCTATGGAAACCTCTTGGTTTGTGCACATGGATTTAACTTCATAAGAGGACCAGAAACTAGAGAGCAGTATCCAAATAAGTTTATCCAACGAGATGATACTGAACGGTTTTACATTCTGAACACACTCTTCAACCTTCCAGAAACCTACCTGTTGGCCTGCCTAGTAGATTTTTTTACTAATTGTCCCAGATATACCAGTTGTGACACAGGATTTAAAGATGGGGACCTCTTCATGTCCTACAGGAGTATGTTCCAGGATGTAAGGGACGCAGTGGACTGGGTCCATTACAAGGGTTCCCTTAAGGAAAAGACAGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGCAAGTTGCCGTTGCTTCTGAGCCGAATGAAGGAAGTGGGGAAAGTGTTTCTGGCCACTAACAGTGACTATAAGTACACAGATAAAATCATGACTTACCTGTTTGATTTCCCACATGGCCCCAAGCCTGGGAGCTCCCACCGGCCGTGGCAGTCCTACTTTGATCTGATTTTGGTGGATGCACGGAAACCGCTCTTTTTTGGAGAAGGCACAGTGCTGCGTCAGGTGGACACTAAAACCGGAAAACTGAAAATCGGCACCTACACGGGCCCCCTGCAGCATGGCATCGTCTACTCAGGAGGTTCATCTGATACAATCTGTGACCTGTTGGGAGCTAAGGGCAAAGACATTTTGTATATTGGAGATCACATTTTTGGAGACATTTTGAAGTCAAAGAAACGGCAAGGGTGGAGAACTTTCTTGGTGATTCCTGAGCTTGCACAAGAGCTGCACGTCTGGACTGACAAAAGTTCACTTTTTGAAGAACTTCAAAGCTTGGATATTTTCTTGGCTGAACTCTACAAGCACCTGGACAGCAGCAGCAACGAGCGCCCAGACATCAGTTCCATCCAGAGACGGATCAAGAAAGTGACTCATGACATGGACATGTGCTACGGGATGATGGGAAGCCTGTTCCGCAGTGGCTCCCGGCAGACGCTCTTTGCCAGCCAAGTGATGCGGTACGCTGACCTCTATGCAGCATCCTTCATCAACCTGCTGTACTACCCATTCAGCTACCTCTTCAGAGCGGCCCACGTCCTGATGCCGCACGAATCAACAGTGGAGCACACACATGTGGATATCAATGAGATGGAGTCCCCTCTCGCCACCCGCAACCGCACATCGGTGGATTTCAAAGACACTGACTATAAGCGACACCAGCTCACGAGGTCCATTAGTGAGATCAAGCCTCCCAACCTCTTCCCTCTGGCTCCCCAGGAGATCACACACTGCCATgatgaagatgatgatgaggaagaggaagaggaagaATAA