Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Callithrix jacchus
Full Name N/A
Also known as HMG-1
Coordinate chr5:148486686-148624687
Strand -
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P1 chr2:130732555-130733972 + Intragenic
N/A UCSC
HMGB1P2 chr2:132297042-132298150 - Intragenic
N/A UCSC
HMGB1P3 chr2:137162366-137163519 + Intragenic
N/A UCSC
HMGB1P4 chr2:82349184-82349474 - Intergenic
N/A UCSC
HMGB1P5 chr2:82980225-82981400 + Intergenic
N/A UCSC
HMGB1P6 chr2:88891857-88893007 + Intragenic
N/A UCSC
HMGB1P7 chr3:118006859-118009093 - Intergenic
N/A UCSC
HMGB1P8 chr3:118674590-118675493 - Intergenic
N/A UCSC
HMGB1P9 chr3:150704410-150705815 + Intergenic
N/A UCSC
HMGB1P10 chr4:136192668-136193574 - Intergenic
N/A UCSC
HMGB1P11 chr4:139053240-139053760 - Intergenic
N/A UCSC
HMGB1P12 chr4:147793000-147794834 + Intergenic
N/A UCSC
HMGB1P13 chr4:58120296-58121910 - Intergenic
N/A UCSC
HMGB1P14 chr5:102514314-102516601 + Intergenic
N/A UCSC
HMGB1P15 chr5:118332327-118333552 - Intergenic
N/A UCSC
HMGB1P16 chr5:150007182-150008020 + Intergenic
N/A UCSC
HMGB1P17 chr5:31824062-31825254 - Intergenic
N/A UCSC
HMGB1P18 chr5:96211819-96212902 - Intragenic
N/A UCSC
HMGB1P19 chr6:109758860-109759935 + Intergenic
N/A UCSC
HMGB1P20 chr6:112595347-112596477 + Intergenic
N/A UCSC
HMGB1P21 chr6:137655681-137656928 + Intergenic
N/A UCSC
HMGB1P22 chr6:16631089-16632290 - Intragenic
N/A UCSC
HMGB1P23 chr6:21763082-21764137 + Intragenic
N/A UCSC
HMGB1P24 chr6:56645530-56648056 + Intragenic
N/A UCSC
HMGB1P25 chr7:116101021-116102155 + Intergenic
N/A UCSC
HMGB1P26 chr7:122512099-122514335 + Intragenic
N/A UCSC
HMGB1P28 chr7:30328412-30329012 + Intragenic
N/A UCSC
HMGB1P29 chr7:74058880-74059688 + Intergenic
N/A UCSC
HMGB1P30 chr7:80814936-80815270 + Intergenic
N/A UCSC
HMGB1P31 chr7:85760462-85761561 - Intergenic
N/A UCSC
HMGB1P32 chr8:15735383-15737547 - Intergenic
N/A UCSC
HMGB1P33 chr8:95515151-95516302 + Intragenic
N/A UCSC
HMGB1P34 chr9:41123595-41124155 - Intergenic
N/A UCSC
HMGB1P35 chr10:2518005-2519247 + Intragenic
N/A UCSC
HMGB1P36 chr10:40624273-40624503 + Intergenic
N/A UCSC
HMGB1P37 chr10:81807104-81807534 - Intergenic
N/A UCSC
HMGB1P38 chr10:89473395-89474802 + Intragenic
N/A UCSC
HMGB1P39 chr10:99154661-99155308 + Intergenic
N/A UCSC
HMGB1P40 chr11:121790069-121790816 - Intergenic
N/A UCSC
HMGB1P41 chr11:18330735-18331435 - Intragenic
N/A UCSC
HMGB1P43 chr12:45506368-45507147 + Intragenic
N/A UCSC
HMGB1P44 chr12:64463285-64464427 - Intragenic
N/A UCSC
HMGB1P45 chr13:100145235-100146636 - Intergenic
N/A UCSC
HMGB1P46 chr13:20080552-20081755 + Intergenic
N/A UCSC
HMGB1P47 chr14:102722796-102723783 + Intergenic
N/A UCSC
HMGB1P48 chr14:86406965-86408174 - Intergenic
N/A UCSC
HMGB1P49 chr15:25934761-25935281 - Intergenic
N/A UCSC
HMGB1P50 chr15:47004067-47004281 + Intergenic
N/A UCSC
HMGB1P52 chr16:88186116-88186315 + Intergenic
N/A UCSC
HMGB1P53 chr16:95529274-95530481 - Intergenic
N/A UCSC
HMGB1P54 chr17:29637548-29638636 + Intergenic
N/A UCSC
HMGB1P55 chr18:7672510-7673145 - Intergenic
N/A UCSC
HMGB1P56 chr19:18081385-18082597 + Intergenic
N/A UCSC
HMGB1P57 chr20:30507342-30507894 + Intragenic
N/A UCSC
HMGB1P58 chrX:105316366-105318271 + Intergenic
N/A UCSC
HMGB1P60 chrX:5093068-5094157 + Intergenic
N/A UCSC
HMGB1P61 chrX:92952107-92952748 + Intergenic
N/A UCSC
HMGB1P42 chr12:36591057-36591581 - Intergenic
N/A UCSC
HMGB1P27 chr7:12481074-12482094 - Intragenic
N/A UCSC
HMGB1P51 chr16:44288098-44288268 + Intragenic
N/A UCSC
HMGB1P59 chrX:49393949-49395981 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_035302437.1
CCGTGAGTTGGCGGTAGCCAATAGGAGCCGCGCTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGaaaaataactaaacatgggcaaaggagatCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGATAAGGCCCGTTATGAGAGGGAAATGAAAACCTATATTCCTCCTAAAGgggagacaaaaaagaaattcaaggatCCCAATGCACCCAAGAGGCCTCCttcggCCTTTTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATTAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCCGCgaagctgaaggaaaaatatgaaaagGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCCAAAAAGGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagtTGGTTCTAgcgcagttttgttttcttgtctataaagcaTTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaagttgcagctgTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGgtctgaaatttttcttcttgagGGGAAGCTAGTCTTTTtacttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTGCACACCCTGCATATCATAATGGGGGTAAAGAAGTTGAGATAGTTTTCATCCAtaactaaaaatccaaaatcttgaTCAGTTAAGAAATTTCACATAGCCCACTTATATTTACAAACTGAAGAGTAATCGATCTACTCACAGCATGGGACTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACTTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACGTTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCgtattaaattttttgttgacaTTAGTCTCGGTGAAGACTATGAAAATGCTGGCTATAGATGTGTTTTTCCATTAAATATGGACTGCTCAGGAAACAAGACTTtccattacaaatatttttaattcattgggccagcttttaaaatgaagataccaCATTCAGAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTAAATCCAAGTAGATAGGAGGAAAGAAGATAAACTTTTCCTCTGAGTGTGAATTATTCAATTTATTtggatgatttttctttaaaacccaAATTCATTCATTAGTCATGTTTATCTACTTATCAGTTTAGGGAACAATTTGGCAATTTTGCGGTTTTTGAGATTATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_035302438.1
GATTACGCTAAGGAAAGAGACCTGCTTACGCTCCGCTGGTTCCTGGTCCGCGAGAGCGTGGTCGGGAACCGCCGGGCCCTGGAGTGACCCGCggaggtgggagagggaaggGCTCCCGAAGCCGGCGGTACTGCCATGGAGGCTCTCCGCCGGCGCGGCTTTCACAGCGCGGCCGCCCTGGGCATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGCCAAAGCTGCCACAGAGTGCATGTTCACAAAGGGTCATCACACACGGAGGtgcccctccctgtctccctagAGCCCACCTTCGAGCCAGGGGCTTTTCTACCAGGATTCTGGGGtgtttctcctcccttcctccctcccagatCTTCTCACGaaaaataactaaacatgggcaaaggagatCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGATAAGGCCCGTTATGAGAGGGAAATGAAAACCTATATTCCTCCTAAAGgggagacaaaaaagaaattcaaggatCCCAATGCACCCAAGAGGCCTCCttcggCCTTTTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATTAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCCGCgaagctgaaggaaaaatatgaaaagGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCCAAAAAGGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagtTGGTTCTAgcgcagttttgttttcttgtctataaagcaTTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaagttgcagctgTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGgtctgaaatttttcttcttgagGGGAAGCTAGTCTTTTtacttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTGCACACCCTGCATATCATAATGGGGGTAAAGAAGTTGAGATAGTTTTCATCCAtaactaaaaatccaaaatcttgaTCAGTTAAGAAATTTCACATAGCCCACTTATATTTACAAACTGAAGAGTAATCGATCTACTCACAGCATGGGACTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACTTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACGTTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCgtattaaattttttgttgacaTTAGTCTCGGTGAAGACTATGAAAATGCTGGCTATAGATGTGTTTTTCCATTAAATATGGACTGCTCAGGAAACAAGACTTtccattacaaatatttttaattcattgggccagcttttaaaatgaagataccaCATTCAGAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTAAATCCAAGTAGATAGGAGGAAAGAAGATAAACTTTTCCTCTGAGTGTGAATTATTCAATTTATTtggatgatttttctttaaaacccaAATTCATTCATTAGTCATGTTTATCTACTTATCAGTTTAGGGAACAATTTGGCAATTTTGCGGTTTTTGAGATTATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_035302439.1
GGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGGTGAGTCTGGGGCAGCGCCGCGGCGGGGAGAACGCCTCCGGCAGCTTCCCAGCCCGCGCGGCGGCCGGATCCCCGCGGCCGGGAGCCGGCGGGTCAGGATCCACACAAAGaaaaataactaaacatgggcaaaggagatCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGATAAGGCCCGTTATGAGAGGGAAATGAAAACCTATATTCCTCCTAAAGgggagacaaaaaagaaattcaaggatCCCAATGCACCCAAGAGGCCTCCttcggCCTTTTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATTAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCCGCgaagctgaaggaaaaatatgaaaagGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCCAAAAAGGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagtTGGTTCTAgcgcagttttgttttcttgtctataaagcaTTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaagttgcagctgTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGgtctgaaatttttcttcttgagGGGAAGCTAGTCTTTTtacttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTGCACACCCTGCATATCATAATGGGGGTAAAGAAGTTGAGATAGTTTTCATCCAtaactaaaaatccaaaatcttgaTCAGTTAAGAAATTTCACATAGCCCACTTATATTTACAAACTGAAGAGTAATCGATCTACTCACAGCATGGGACTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACTTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACGTTAAAGAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCgtattaaattttttgttgacaTTAGTCTCGGTGAAGACTATGAAAATGCTGGCTATAGATGTGTTTTTCCATTAAATATGGACTGCTCAGGAAACAAGACTTtccattacaaatatttttaattcattgggccagcttttaaaatgaagataccaCATTCAGAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTAAATCCAAGTAGATAGGAGGAAAGAAGATAAACTTTTCCTCTGAGTGTGAATTATTCAATTTATTtggatgatttttctttaaaacccaAATTCATTCATTAGTCATGTTTATCTACTTATCAGTTTAGGGAACAATTTGGCAATTTTGCGGTTTTTGAGATTATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA