Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pphln1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Cricetulus griseus
Full Name N/A
Also known as -
Coordinate chr2:389976569-390056949
Strand +
Gene summary N/A

Retrocopy(s) from Pphln1

Retroname Coord Strand Genomic Region ENSG
Pphln1_1P2 chr7:33091654-33091819 - Intergenic
 N/A UCSC
Pphln1_1P4 chrX:92831845-92835146 - Intergenic
 N/A UCSC
Pphln1_1P1 chr3:275353266-275354855 - Intergenic
 N/A UCSC
Pphln1_1P3 chrX:89964501-89965468 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_027396347.2
CAATCCATCCAGGGTGCGGCAGAGTTTTGAGAGGCGTTAATGTTAATGCCTTGGAGTCCACCAAGGGACCACTGGGACTAATTCTCTTGGCAAACTTGTGGCCAGCCAAAACTACCATGCTTCACATCCCGGTTGTGCTTGGTTATCGCCCAAGATtgGCTTCCACAAGAGATGAGATGTGGTCTGAGGGACGATATGACTACGAACGTCTTCCAAGAGAACGAGCACCCCCTCGGAGCCATGCCAGTgATGGCTACCATAGAGTAGTTAATGTTGTGCCAAAGAGACCACCTCTGCTAGACAAGAGACCGCCTCTGCTAGACAAGAGACCGCCTCTGCTAGCCAGACCTGATGAAGGAGGCTACAGTAGATATTACAGTCATGTTGATTACCGAGAATGTGACGAGGGCCGCAGTTTTTCTCATGATCGAAGAAGTGGCCCACCTCACAGAGGAgatgaTTCTGGCTACAGATGGACAAGAGATGATCATTCCACAAGCCGACAGCCTGAATACAGggACATGAGAGATGGCTTTAGAAGAAAAAGTTTCTACTCTTCCCATTATTCAAGAGAACGATCTCCCCATAAAAGGGACGCTCCTTTTTTCAGAGAGTCGCCTGTAGGCCGGAAGGACTCCCCACACAGCAGATCTGGCTCCAGTCTCAGCAGTAGAAGCTACTCTCCAGAACGAAGCAGGACACACTCCGTCCATCAGTCTCAGAACAGAAGTAAAGAGAGGTCCATCCAGTCTCTGAAAACATCAAGAGATACTTCACCCTCAAGTTCTTCAGCAGTTTCTTCATCCAAGGTGTTAGACAAACCTAGCCAGCTAACTGAGAAGGAACTTGCTGAGGCTGCAAGCAAGTGGGCTAATGAAAAGCCGGAGAAGGGAGATGAAAATAACTTGACTGAGATTTCCGAGTTTGAGACGGGATCCATGGCACCCTTATTTATCGACCAGACAGAAGAACCAGAGTCAAACACAACAGATGGCACAGAATTGTATGAAGACAGCCAGATTAGCAGTCGTTCTAAAGCTATTGcatcaaaaaccaaagaaattgaGCAGGTTTACCGACAAGACTGTGAAACTTTCGGGATGGTGGTGAAGATGCTGATTGAAAAAGACCCTTCATTAGAAAAATCTATACAGTTTGCATTGAGGCAGAATTTACACGAAATAGGTGAGCGATGTGTTGAAGAACTCAAACATTTCATTACTGAGTATGATAATTCTACTCAAGATTTTGGAGACCCTTTTTAGAAGAATTAGTGCCCAggtcaaaaaaaatttttaaagcttCTAGATTTTTTCGCCTTGGATTGTTTAAATCCTTACTATTTTGTGATGAAGAGAAATACTTTATGATAGCTGACCACATTTCTAGTATCAAATAAACATCTGCAATAGCTTTTAAAGTATCTCAATTAGAATGGTTTCCCTGTGTGTAGAATATTCTAATCGATCTTCATacacctcctccttcccccaaaaTAATGTTCAATTAATTTTTTAGTGTTTGAAAAACCAGTTCTGGAGAGCAGTTTTCATGTTCAATAGTCTTCCATGGTGTGTTGGTCTCAAGAGTATAATTTGTAGTTAGAGATCATTCCAGGTTGCATCTCATGGCACTATTAGCATTTTGTGTTGAGTATGATTGCTGCTTGCTTTATCTTCAGCTTTGTAACTTTTGGTGACATCAAAATAAGCTGTGTTAATGAAATTAGAACTTTGCTATCTTACAATATTTACTTTGAGAATAATTCTTATTTAGCATTACAAAGAAGCACTTAAATCTCTAAAGGACACATTAGAACAAAACCTTCTCAAGTCAGCGAACTTCGTGGGTCTCTCCTATGAGGTGAAAGTCCTGACTGCTCTCTCTGAACAACATGATAGATAAGACTGATAGGAGGGGTAATCTGAGATTTGTTTTAAGTTATTTCTCAGAAACTCTTCTGGTGACTACTAAAAAATTAGACTATTCAAGAACCTGAAGTTTTGTTTAGGCTCGTTCTTTATCAAAGAGGAACCTGACAAGGAGCTTGTACTTTCGATTAAACAACGGATTTCTCTGCTAGTTTCCATGATCTCAATTCTGTAGACTGAGAGAATCTCCCTCTTCACAAGTATTATCATAGAAACAAGGCAGAAAACAGCAAGGCCAGCACAGCTCCGCTCACCTTGTGAGTGAGCCAGTGAATAAGTGAAGAGGCAGTAACGACATCCCACTCATTTCCTGGTCCTTTCCAGCAATGCACTGAGCCAAAACACATAATTTGTGACATTAggtacctttaaaaaaaaaaaatcatgattttaaTTACTGCCCTATTTCATTatctacttttttttgtttgtttgttttgagtcaggattttatagtgtagccctggctagcctgaataTCTCTATATAGACCAGCATTAAgcacatgtgccaccatgctcagtatctttttttttttttttttttttcccattttcattcatttctgttcttttaccttttttatttgagatagggtcttactgtgtatcctgggctggcttcaaactttccTACCCTGGcctttaacttttgtttttcctgcttcaTCTTCCCTGATTTCTCCGAGtttcaggtgtgagccaccatactccATTGTGGCCTCCACTGATGCTGTCTACACAGATTCCCCCAAAGTACATACAGATTATATTAAATGTAGAAATAGCAGTATGAATAATTTTAATGAGCCCTGCAATGGATTGTGATGTTATATATTATGCCATTTTGAAAATTAAACTCTAATTgaggacatttattttttttttcacatttcctaAGTGGGAACACTTGGAGCTATTTTTGGCATTGAGATTCTGTACATACCTTTTATAAACATATGCCTCCTCAGTGGATGCAGTAACTGAACTGCTGGTTCcttgagaaagacagaaagtacTGATGctagttttcctttttccctACCACTAGTTTCCAGCTCTTTTAATCAAGTTGTCAGCAAGCATAACTATAAAATTTGAGAAGCTACCAAGGCAATGAATTGTTCATTCGGTAGAAATTCATAAAAACAGAATCTTACTAATAGTACTAAATGTAGGTCCAACCAATAATCTCCTTCCCTCAGATTACATTCAGCATTTGAAGCTATTTCTAGCTGGCCGTCAGCATTATTCTGTAGACTTGTCAGTGttaaatgctttgtttatttttgttttttaaaatgcctttaaaGTCTAAGGCACATACATTCATATGTGTACTAGGATATTTTGtaaaaacattttgtaaaatgtttttgaTTAGACAGATGTTTGTAAATTATCCATTGTTTTTGAGTATGCCTAATTTGCGTGATACCATTTTCATTGTCTTACTGTAAAGCCTTGATGATCAACATGGGGGAGGCAGATACTGTAAAGGTtttgtaaactttaaaaatgcaaaataaagcaACCAATACTAAATAA
>XM_027396348.2
CTCTGGTAACCCTGAAGCCTCGGCGAGCGCGGGCCCGAGCTTGGCGCCCCCGGCGACGTCATTGCTCGCGCCGGAAGTTCCTTCGGCGAGGGCGGACGTCTGCCTTCGCGGGATTCAGCGGCAGCGGCGGAACGTAGtgGCTTCCACAAGAGATGAGATGTGGTCTGAGGGACGATATGACTACGAACGTCTTCCAAGAGAACGAGCACCCCCTCGGAGCCATGCCAGTgATGGCTACCATAGAGTAGTTAATGTTGTGCCAAAGAGACCACCTCTGCTAGACAAGAGACCGCCTCTGCTAGACAAGAGACCGCCTCTGCTAGCCAGACCTGATGAAGGAGGCTACAGTAGATATTACAGTCATGTTGATTACCGAGAATGTGACGAGGGCCGCAGTTTTTCTCATGATCGAAGAAGTGGCCCACCTCACAGAGGAgatgaTTCTGGCTACAGATGGACAAGAGATGATCATTCCACAAGCCGACAGCCTGAATACAGggACATGAGAGATGGCTTTAGAAGAAAAAGTTTCTACTCTTCCCATTATTCAAGAGAACGATCTCCCCATAAAAGGGACGCTCCTTTTTTCAGAGAGTCGCCTGTAGGCCGGAAGGACTCCCCACACAGCAGATCTGGCTCCAGTCTCAGCAGTAGAAGCTACTCTCCAGAACGAAGCAGGACACACTCCGTCCATCAGTCTCAGAACAGAAAGTCCTCGCATGTTGGTGCTTCCTACAAACGAAAGAATGAAGCAAATCCAGGAAGAGGTAAAGAGAGGTCCATCCAGTCTCTGAAAACATCAAGAGATACTTCACCCTCAAGTTCTTCAGCAGTTTCTTCATCCAAGGTGTTAGACAAACCTAGCCAGCTAACTGAGAAGGAACTTGCTGAGGCTGCAAGCAAGTGGGCTAATGAAAAGCCGGAGAAGGGAGATGAAAATAACTTGACTGAGATTTCCGAGTTTGAGACGGGATCCATGGCACCCTTATTTATCGACCAGACAGAAGAACCAGAGTCAAACACAACAGATGGCACAGAATTGTATGAAGACAGCCAGATTAGCAGTCGTTCTAAAGCTATTGcatcaaaaaccaaagaaattgaGCAGGTTTACCGACAAGACTGTGAAACTTTCGGGATGGTGGTGAAGATGCTGATTGAAAAAGACCCTTCATTAGAAAAATCTATACAGTTTGCATTGAGGCAGAATTTACACGAAATAGGTGAGCGATGTGTTGAAGAACTCAAACATTTCATTACTGAGTATGATAATTCTACTCAAGATTTTGGAGACCCTTTTTAGAAGAATTAGTGCCCAggtcaaaaaaaatttttaaagcttCTAGATTTTTTCGCCTTGGATTGTTTAAATCCTTACTATTTTGTGATGAAGAGAAATACTTTATGATAGCTGACCACATTTCTAGTATCAAATAAACATCTGCAATAGCTTTTAAAGTATCTCAATTAGAATGGTTTCCCTGTGTGTAGAATATTCTAATCGATCTTCATacacctcctccttcccccaaaaTAATGTTCAATTAATTTTTTAGTGTTTGAAAAACCAGTTCTGGAGAGCAGTTTTCATGTTCAATAGTCTTCCATGGTGTGTTGGTCTCAAGAGTATAATTTGTAGTTAGAGATCATTCCAGGTTGCATCTCATGGCACTATTAGCATTTTGTGTTGAGTATGATTGCTGCTTGCTTTATCTTCAGCTTTGTAACTTTTGGTGACATCAAAATAAGCTGTGTTAATGAAATTAGAACTTTGCTATCTTACAATATTTACTTTGAGAATAATTCTTATTTAGCATTACAAAGAAGCACTTAAATCTCTAAAGGACACATTAGAACAAAACCTTCTCAAGTCAGCGAACTTCGTGGGTCTCTCCTATGAGGTGAAAGTCCTGACTGCTCTCTCTGAACAACATGATAGATAAGACTGATAGGAGGGGTAATCTGAGATTTGTTTTAAGTTATTTCTCAGAAACTCTTCTGGTGACTACTAAAAAATTAGACTATTCAAGAACCTGAAGTTTTGTTTAGGCTCGTTCTTTATCAAAGAGGAACCTGACAAGGAGCTTGTACTTTCGATTAAACAACGGATTTCTCTGCTAGTTTCCATGATCTCAATTCTGTAGACTGAGAGAATCTCCCTCTTCACAAGTATTATCATAGAAACAAGGCAGAAAACAGCAAGGCCAGCACAGCTCCGCTCACCTTGTGAGTGAGCCAGTGAATAAGTGAAGAGGCAGTAACGACATCCCACTCATTTCCTGGTCCTTTCCAGCAATGCACTGAGCCAAAACACATAATTTGTGACATTAggtacctttaaaaaaaaaaaatcatgattttaaTTACTGCCCTATTTCATTatctacttttttttgtttgtttgttttgagtcaggattttatagtgtagccctggctagcctgaataTCTCTATATAGACCAGCATTAAgcacatgtgccaccatgctcagtatctttttttttttttttttttttcccattttcattcatttctgttcttttaccttttttatttgagatagggtcttactgtgtatcctgggctggcttcaaactttccTACCCTGGcctttaacttttgtttttcctgcttcaTCTTCCCTGATTTCTCCGAGtttcaggtgtgagccaccatactccATTGTGGCCTCCACTGATGCTGTCTACACAGATTCCCCCAAAGTACATACAGATTATATTAAATGTAGAAATAGCAGTATGAATAATTTTAATGAGCCCTGCAATGGATTGTGATGTTATATATTATGCCATTTTGAAAATTAAACTCTAATTgaggacatttattttttttttcacatttcctaAGTGGGAACACTTGGAGCTATTTTTGGCATTGAGATTCTGTACATACCTTTTATAAACATATGCCTCCTCAGTGGATGCAGTAACTGAACTGCTGGTTCcttgagaaagacagaaagtacTGATGctagttttcctttttccctACCACTAGTTTCCAGCTCTTTTAATCAAGTTGTCAGCAAGCATAACTATAAAATTTGAGAAGCTACCAAGGCAATGAATTGTTCATTCGGTAGAAATTCATAAAAACAGAATCTTACTAATAGTACTAAATGTAGGTCCAACCAATAATCTCCTTCCCTCAGATTACATTCAGCATTTGAAGCTATTTCTAGCTGGCCGTCAGCATTATTCTGTAGACTTGTCAGTGttaaatgctttgtttatttttgttttttaaaatgcctttaaaGTCTAAGGCACATACATTCATATGTGTACTAGGATATTTTGtaaaaacattttgtaaaatgtttttgaTTAGACAGATGTTTGTAAATTATCCATTGTTTTTGAGTATGCCTAATTTGCGTGATACCATTTTCATTGTCTTACTGTAAAGCCTTGATGATCAACATGGGGGAGGCAGATACTGTAAAGGTtttgtaaactttaaaaatgcaaaataaagcaACCAATACTAAATAA
>XM_027396361.2
GTCAGCAGCCGTGAGCCCAAAGCCTGCCCTGAAGCCTGCACAATCAATCCTGACTGAAGCGGAGGGACGAAGTGCAATCCATCCAGGGTGCGGCAGAGTTTTGAGAGGCGTTAATGTTAATGCCTTGGAGTCCACCAAGGGACCACTGGGACTAATTCTCTTGGCAAACTTGTGGCCAGCCAAAACTACCATGCTTCACATCCCGGTTGTGCTTGGTTATCGCCCAAGATtgGCTTCCACAAGAGATGAGATGTGGTCTGAGGGACGATATGACTACGAACGTCTTCCAAGAGAACGAGCACCCCCTCGGAGCCATGCCAGTgatgaTTCTGGCTACAGATGGACAAGAGATGATCATTCCACAAGCCGACAGCCTGAATACAGggACATGAGAGATGGCTTTAGAAGAAAAAGTTTCTACTCTTCCCATTATTCAAGAGAACGATCTCCCCATAAAAGGGACGCTCCTTTTTTCAGAGAGTCGCCTGTAGGCCGGAAGGACTCCCCACACAGCAGATCTGGCTCCAGTCTCAGCAGTAGAAGCTACTCTCCAGAACGAAGCAGGACACACTCCGTCCATCAGTCTCAGAACAGAAGTAAAGAGAGGTCCATCCAGTCTCTGAAAACATCAAGAGATACTTCACCCTCAAGTTCTTCAGCAGTTTCTTCATCCAAGGTGTTAGACAAACCTAGCCAGCTAACTGAGAAGGAACTTGCTGAGGCTGCAAGCAAGTGGGCTAATGAAAAGCCGGAGAAGGGAGATGAAAATAACTTGACTGAGATTTCCGAGTTTGAGACGGGATCCATGGCACCCTTATTTATCGACCAGACAGAAGAACCAGAGTCAAACACAACAGATGGCACAGAATTGTATGAAGACAGCCAGATTAGCAGTCGTTCTAAAGCTATTGcatcaaaaaccaaagaaattgaGCAGGTTTACCGACAAGACTGTGAAACTTTCGGGATGGTGGTGAAGATGCTGATTGAAAAAGACCCTTCATTAGAAAAATCTATACAGTTTGCATTGAGGCAGAATTTACACGAAATAGGTGAGCGATGTGTTGAAGAACTCAAACATTTCATTACTGAGTATGATAATTCTACTCAAGATTTTGGAGACCCTTTTTAGAAGAATTAGTGCCCAggtcaaaaaaaatttttaaagcttCTAGATTTTTTCGCCTTGGATTGTTTAAATCCTTACTATTTTGTGATGAAGAGAAATACTTTATGATAGCTGACCACATTTCTAGTATCAAATAAACATCTGCAATAGCTTTTAAAGTATCTCAATTAGAATGGTTTCCCTGTGTGTAGAATATTCTAATCGATCTTCATacacctcctccttcccccaaaaTAATGTTCAATTAATTTTTTAGTGTTTGAAAAACCAGTTCTGGAGAGCAGTTTTCATGTTCAATAGTCTTCCATGGTGTGTTGGTCTCAAGAGTATAATTTGTAGTTAGAGATCATTCCAGGTTGCATCTCATGGCACTATTAGCATTTTGTGTTGAGTATGATTGCTGCTTGCTTTATCTTCAGCTTTGTAACTTTTGGTGACATCAAAATAAGCTGTGTTAATGAAATTAGAACTTTGCTATCTTACAATATTTACTTTGAGAATAATTCTTATTTAGCATTACAAAGAAGCACTTAAATCTCTAAAGGACACATTAGAACAAAACCTTCTCAAGTCAGCGAACTTCGTGGGTCTCTCCTATGAGGTGAAAGTCCTGACTGCTCTCTCTGAACAACATGATAGATAAGACTGATAGGAGGGGTAATCTGAGATTTGTTTTAAGTTATTTCTCAGAAACTCTTCTGGTGACTACTAAAAAATTAGACTATTCAAGAACCTGAAGTTTTGTTTAGGCTCGTTCTTTATCAAAGAGGAACCTGACAAGGAGCTTGTACTTTCGATTAAACAACGGATTTCTCTGCTAGTTTCCATGATCTCAATTCTGTAGACTGAGAGAATCTCCCTCTTCACAAGTATTATCATAGAAACAAGGCAGAAAACAGCAAGGCCAGCACAGCTCCGCTCACCTTGTGAGTGAGCCAGTGAATAAGTGAAGAGGCAGTAACGACATCCCACTCATTTCCTGGTCCTTTCCAGCAATGCACTGAGCCAAAACACATAATTTGTGACATTAggtacctttaaaaaaaaaaaatcatgattttaaTTACTGCCCTATTTCATTatctacttttttttgtttgtttgttttgagtcaggattttatagtgtagccctggctagcctgaataTCTCTATATAGACCAGCATTAAgcacatgtgccaccatgctcagtatctttttttttttttttttttttcccattttcattcatttctgttcttttaccttttttatttgagatagggtcttactgtgtatcctgggctggcttcaaactttccTACCCTGGcctttaacttttgtttttcctgcttcaTCTTCCCTGATTTCTCCGAGtttcaggtgtgagccaccatactccATTGTGGCCTCCACTGATGCTGTCTACACAGATTCCCCCAAAGTACATACAGATTATATTAAATGTAGAAATAGCAGTATGAATAATTTTAATGAGCCCTGCAATGGATTGTGATGTTATATATTATGCCATTTTGAAAATTAAACTCTAATTgaggacatttattttttttttcacatttcctaAGTGGGAACACTTGGAGCTATTTTTGGCATTGAGATTCTGTACATACCTTTTATAAACATATGCCTCCTCAGTGGATGCAGTAACTGAACTGCTGGTTCcttgagaaagacagaaagtacTGATGctagttttcctttttccctACCACTAGTTTCCAGCTCTTTTAATCAAGTTGTCAGCAAGCATAACTATAAAATTTGAGAAGCTACCAAGGCAATGAATTGTTCATTCGGTAGAAATTCATAAAAACAGAATCTTACTAATAGTACTAAATGTAGGTCCAACCAATAATCTCCTTCCCTCAGATTACATTCAGCATTTGAAGCTATTTCTAGCTGGCCGTCAGCATTATTCTGTAGACTTGTCAGTGttaaatgctttgtttatttttgttttttaaaatgcctttaaaGTCTAAGGCACATACATTCATATGTGTACTAGGATATTTTGtaaaaacattttgtaaaatgtttttgaTTAGACAGATGTTTGTAAATTATCCATTGTTTTTGAGTATGCCTAATTTGCGTGATACCATTTTCATTGTCTTACTGTAAAGCCTTGATGATCAACATGGGGGAGGCAGATACTGTAAAGGTtttgtaaactttaaaaatgcaaaataaagcaACCAATACTAAATAA