Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Txnl4a
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name thioredoxin-like 4A
Also known as Txnl4
Coordinate chr18:76725221-76740673
Strand +
Gene summary Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytosol; nuclear membrane; and nucleoplasm. Predicted to be part of U2-type precatalytic spliceosome and U4/U6 x U5 tri-snRNP complex. Human ortholog(s) of this gene implicated in Burn-McKeown syndrome. Orthologous to human TXNL4A (thioredoxin like 4A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Txnl4a

Retroname Coord Strand Genomic Region ENSG
Txnl4aP1 chr18:62113737-62114322 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001309168.1
GAAAAAGCGTCAGCGCGTGAGGGCGCGGGAGGCGCTGGCGCTGGTGCTGGGTGGAGGACCCGGCGGTCGGGCCGCGTGGGCTCACACGAGGTAGTTCGCGGCGTCCGGCCGCGCAAGCGCGTTCAAGATGTCGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATTCTTTCGGAGGAGGACCGCGTGGTCGTCATTCGCTTCGGACACGACTGGGACCCCACTTGCATGAAGATGGACGAGGTTCTGTACAGCATTGCCGAAAAGGTTAAAAATTTTGCAGTTATTTATCTTGTGGATATTACAGAAGTACCTGACTTCAACAAGATGTATGAGCTCTATGACCCATGCACGGTCATGTTCTTCTTCAGAAACAAACACATCATGATTGATTTGGGCACTGGTAACAATAACAAGATCAACTGGGCCATGGAAGACAAGCAGGAAATGGTTGACATCATAGAGACCGTGTACCGTGGCGCCCGCAAAGGCCGAGGCCTGGTGGTGTCGCCCAAGGACTATTCCACAAAGTACAGATACTGAGCACTGACTCAGGCTGTGCACAGGACACTGGGAGCCTCTTCTGGCTAGACAGACTCTGCTCTCATAGCCTCGGGAAAGGGCCTGCAGCAGAACATGGCCTTAGGGCTGGAGGAGCCTTGAGATGAGTTACAGGGGCCTTAACTACCTGAAGCAAATAAACGTGAAGGAACAGTAGGAA