Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Styx
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name serine/threonine/tyrosine interacting protein
Also known as -
Coordinate chr15:19690194-19717774
Strand +
Gene summary Predicted to enable F-box domain binding activity and pseudophosphatase activity. Predicted to be involved in several processes, including MAPK export from nucleus; negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process; and regulation of ERK1 and ERK2 cascade. Predicted to act upstream of or within spermatogenesis. Predicted to be located in nucleus. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human STYX (serine/threonine/tyrosine interacting protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Styx

Retroname Coord Strand Genomic Region ENSG
StyxP1 chr7:62910845-62911957 + Intragenic
 N/A UCSC
StyxP2 chr14:45950802-45951735 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001271541.1
CGGCCGCAGCATGGCGGCCCGCAGCGCACCGCCCTGCCATCCGCCTTCCTGTCGCAGCCGCCCGGACCCCGTGGTCCGCGAGTGCTTGCTGTGAgcccgccgcgcgtcagcccgccatccgcccgccctccTTCCCTTGTCGCCTCTGCCAGCCCGGGGGGGGGGGGCGGCCGGGCGCGCCGCAGCCACCCGCCGGGGCCCTTGGACCATGGAGGACGTGAAACTGGAGTTCCCCTCGCTCCCGCAGTGCAAAGACGACGCCGAGGAGTGGACTTACCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGGATTGTTCTTAGGCCCCTACTCTTCTGCTATGAAAAGCAAGCTACCTATACTGCAGAAACATGGCATAACTCATATAATTTGCATACGGCAAAATATTGAAGCAAACTTTATTAAACCAAACTTTCAACAATTATTTAGGTATCTAGTCTTGGATATTGCTGATAATCCAGTTGAAAACATAATACGTTTTTTCCCTATGACTAAAGAGTTTATTGATGGAAGCTTACAAAATGGAGGAAAAGTTCTCGTCCATGGGAATGCAGGTATCTCTAGAAGTGCCGCCTTTGTTATTGCATACATCATGGAGACATTTGGGATGAAGTACAGAGATGCATTTGCTTATGTCCAAGAAAGGAGATTTTGTATTAATCCTAATGCTGGATTTGTCCACCAACTTCAGGAATATGAAGCCATCTACTTAGCAAAATTAACAATACAGATGATGTCACCACTCCAGATAGAAAGGTCTTTATCTGTTCATTCTGGTACTACAGGTAGTGTGAAGAGAACATATGAAGATGATGATGACTTTGGGAACATGCAAGTGGCAACCGCACAGAATGGCTGACCTGTGAGGACTGTTATTGCACAGGATCGCTGGACTATGAGGACTGTTACATGGGTGTGAGCTTCCATCTAGAAAGGACAGGATCCTAGTGATGATAATGTGAAATGGTAAACACACAAATACTTTCTTTTCAACTATACGTTGCTTCCAGACATGTTTCTCTGCAACTTGTTGAGCAACAAGTTAAGATGTGGGACTTCTGCAGTAGATGGCGCTGATGGACGATGGGTTTACTTTAAAAAAAAAAACTATGGTTTTATTATAAACCAAGAATTTTGGACTTGCAAAGAGGTATTATTGCAATAATGCACTTTTCATACTTGAAATT