Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name H3F3A
Plot displaying the genomic locations of a parental gene (in scaffold_m19_p_16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Phyllostomus discolor
Full Name N/A
Also known as NULL
Coordinate scaffold_m19_p_16:13128929-13137437
Strand -
Gene summary N/A

Retrocopy(s) from H3F3A

Retroname Coord Strand Genomic Region ENSG
H3F3AP1 scaffold_m19_p_1:116096270-116097286 + Intergenic
N/A UCSC
H3F3AP2 scaffold_m19_p_1:129942520-129943527 + Intergenic
N/A UCSC
H3F3AP3 scaffold_m19_p_1:133218273-133219243 + Intergenic
N/A UCSC
H3F3AP5 scaffold_m19_p_1:192590847-192591799 + Intragenic
N/A UCSC
H3F3AP8 scaffold_m19_p_2:202467275-202468204 + Intragenic
N/A UCSC
H3F3AP9 scaffold_m19_p_2:37886268-37887138 - Intergenic
N/A UCSC
H3F3AP10 scaffold_m19_p_2:56781812-56782821 + Intergenic
N/A UCSC
H3F3AP12 scaffold_m19_p_2:83223314-83224456 - Intergenic
N/A UCSC
H3F3AP13 scaffold_m19_p_2:92637305-92638445 + Intragenic
Intragenic
N/A UCSC
H3F3AP14 scaffold_m19_p_2:9536711-9537718 - Intragenic
N/A UCSC
H3F3AP16 scaffold_m19_p_3:128513310-128514765 - Intragenic
N/A UCSC
H3F3AP17 scaffold_m19_p_3:19796085-19796466 - Intergenic
N/A UCSC
H3F3AP20 scaffold_m19_p_3:96822292-96823319 - Intergenic
N/A UCSC
H3F3AP21 scaffold_m19_p_4:125866761-125867692 + Intergenic
N/A UCSC
H3F3AP24 scaffold_m19_p_4:142994836-142995698 + Intergenic
N/A UCSC
H3F3AP27 scaffold_m19_p_4:190830141-190831160 + Intragenic
N/A UCSC
H3F3AP29 scaffold_m19_p_4:82762909-82763777 - Intergenic
N/A UCSC
H3F3AP31 scaffold_m19_p_5:104567929-104568956 + Intragenic
N/A UCSC
H3F3AP32 scaffold_m19_p_5:117290737-117291774 - Intragenic
N/A UCSC
H3F3AP33 scaffold_m19_p_5:129498187-129500971 - Intragenic
N/A UCSC
H3F3AP34 scaffold_m19_p_5:138047601-138048401 + Intragenic
N/A UCSC
H3F3AP36 scaffold_m19_p_5:51691245-51692258 + Intragenic
N/A UCSC
H3F3AP38 scaffold_m19_p_5:71390861-71391582 - Intergenic
N/A UCSC
H3F3AP39 scaffold_m19_p_5:76924506-76925485 - Intergenic
N/A UCSC
H3F3AP40 scaffold_m19_p_5:85722432-85722753 + Intergenic
N/A UCSC
H3F3AP43 scaffold_m19_p_6:155966489-155967591 - Intergenic
N/A UCSC
H3F3AP44 scaffold_m19_p_6:65499041-65499979 + Intergenic
N/A UCSC
H3F3AP45 scaffold_m19_p_6:77796027-77796986 + Intragenic
N/A UCSC
H3F3AP48 scaffold_m19_p_7:120424154-120425180 + Intragenic
N/A UCSC
H3F3AP50 scaffold_m19_p_7:130853069-130854096 - Intragenic
N/A UCSC
H3F3AP51 scaffold_m19_p_7:69841347-69842343 + Intragenic
Intragenic
N/A UCSC
H3F3AP52 scaffold_m19_p_7:8752110-8753508 + Intergenic
N/A UCSC
H3F3AP53 scaffold_m19_p_8:18917247-18918259 - Intergenic
N/A UCSC
H3F3AP54 scaffold_m19_p_8:59830450-59831474 + Intergenic
N/A UCSC
H3F3AP56 scaffold_m19_p_9:21823374-21826204 + Intragenic
N/A UCSC
H3F3AP57 scaffold_m19_p_9:28064232-28065253 - Intergenic
N/A UCSC
H3F3AP58 scaffold_m19_p_9:49707609-49707768 + Intergenic
N/A UCSC
H3F3AP60 scaffold_m19_p_9:6871313-6872886 - Intragenic
N/A UCSC
H3F3AP63 scaffold_m19_p_10:48921168-48922496 + Intragenic
N/A UCSC
H3F3AP64 scaffold_m19_p_10:51966961-51967830 - Intergenic
N/A UCSC
H3F3AP65 scaffold_m19_p_12:21646216-21646898 + Intergenic
N/A UCSC
H3F3AP66 scaffold_m19_p_12:46305413-46306076 - Intragenic
N/A UCSC
H3F3AP67 scaffold_m19_p_12:71873462-71874489 + Intragenic
N/A UCSC
H3F3AP68 scaffold_m19_p_13:11605979-11606994 + Intergenic
N/A UCSC
H3F3AP69 scaffold_m19_p_13:3134662-3135685 - Intergenic
N/A UCSC
H3F3AP70 scaffold_m19_p_13:49982546-49983096 + Intergenic
N/A UCSC
H3F3AP72 scaffold_m19_p_15:2492687-2493709 - Intergenic
N/A UCSC
H3F3AP73 scaffold_m19_p_15:47297066-47297926 + Intragenic
N/A UCSC
H3F3AP4 scaffold_m19_p_1:154306953-154307089 - Intragenic
N/A UCSC
H3F3AP6 scaffold_m19_p_1:54105050-54106037 - Intergenic
N/A UCSC
H3F3AP7 scaffold_m19_p_1:74099362-74102335 - Intergenic
N/A UCSC
H3F3AP11 scaffold_m19_p_2:68676214-68677350 - Intergenic
N/A UCSC
H3F3AP19 scaffold_m19_p_3:6657956-6658684 - Intragenic
Intragenic
N/A UCSC
H3F3AP22 scaffold_m19_p_4:135806875-135807375 + Intragenic
N/A UCSC
H3F3AP23 scaffold_m19_p_4:136352234-136355276 - Intragenic
N/A UCSC
H3F3AP26 scaffold_m19_p_4:176252785-176253511 - Intergenic
N/A UCSC
H3F3AP28 scaffold_m19_p_4:77574375-77574541 - Intergenic
N/A UCSC
H3F3AP30 scaffold_m19_p_4:89225349-89226325 + Intragenic
N/A UCSC
H3F3AP35 scaffold_m19_p_5:26836219-26837156 + Intragenic
N/A UCSC
H3F3AP37 scaffold_m19_p_5:64428673-64429236 - Intragenic
N/A UCSC
H3F3AP41 scaffold_m19_p_5:92259154-92260020 + Intragenic
N/A UCSC
H3F3AP42 scaffold_m19_p_6:116673659-116674128 + Intragenic
N/A UCSC
H3F3AP46 scaffold_m19_p_6:9439130-9439911 + Intergenic
N/A UCSC
H3F3AP47 scaffold_m19_p_7:118130704-118131456 - Intergenic
N/A UCSC
H3F3AP49 scaffold_m19_p_7:127562213-127563216 + Intergenic
N/A UCSC
H3F3AP55 scaffold_m19_p_8:73898856-73899483 + Intragenic
N/A UCSC
H3F3AP59 scaffold_m19_p_9:66903058-66903775 + Intragenic
N/A UCSC
H3F3AP71 scaffold_m19_p_14:38594393-38595077 - Intragenic
N/A UCSC
H3F3AP74 scaffold_m19_p_15:49612950-49613744 + Intergenic
N/A UCSC
H3F3AP15 scaffold_m19_p_3:107921894-107922243 - Intergenic
N/A UCSC
H3F3AP18 scaffold_m19_p_3:64108035-64108331 + Intergenic
N/A UCSC
H3F3AP25 scaffold_m19_p_4:174230450-174230681 + Intergenic
N/A UCSC
H3F3AP61 scaffold_m19_p_9:96691712-96692043 - Intergenic
N/A UCSC
H3F3AP62 scaffold_m19_p_9:97912321-97912668 - Intergenic
N/A UCSC
H3F3AP75 scaffold_m19_p_19:786496-786885 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>H3F3A_x1
ACCTCGGTGTCAGCCATCTTTCAATTGTGTTCGCAGCCGCCGTCGCTCTCTAACGCCAGCACCTCCTCCAGCTCGCCGAGCTCCAGCCGAAGGAGAAGGGGGGTAAATAAAGAGGTCCCTATACCATGGCTCGTACAAAGCAGACTGCCCGCAAATCGACCGGTGGTAAAGCACCGAGGAAGCAACTGGCTACCAAAGCCGCTCGCAAGAGTGCGCCCTCTACTGGAGGGGTGAAGAAACCTCATCGTTACAGGCCTGGTACTGTGGCACTTCGTGAAATTAGACGTTATCAGAAGTCCACTGAACTTCTGATCCGCAAACTTCCCTTCCAGCGTCTGGTGCGAGAAATTGCTCAGGACTTCAAAACAGATCTGCGCTTCCAGAGTGCAGCTATTGGTGCTTTGCAGGTAAAATGGCTGGTAGGGAAGTCTTTTTAAGAGTTGGAGGTCCTCCGGTGCATCAAGAATAGGTCTAAGTCTTTGCACATGTGTGGATAATTTAATCACAAGCCTGCAAGATAATCCTTTTTTCAGTGTTGAGATGCCAGAAAGGTTAAGTTGCTCGAGGTCATACACACAGAAAATGTAGTTTGATCCCTTTTGACTCCAAAGCCTAGTATGCGTCTTACAAAACCATTTAAATATTTTAAACATTGCACTAAAAAagctttgcgcagtggctgtattacagccaatgaggtttattgtagacatgcttattgctcattgtaaaccttGCACTAAAAACAATGTTTATGGGGAAAAGGCAATCTCTGGTTTGGCTTCTAGATGCTGCAGGACAATAAAAAGATGTCTAAAGGTCTGGTAATCGGTTCCACAGTGGCTGGTATAAAAGGAACGTTAGAATAGATGTCTTGCTGGAGCTGAGGAGGCAGACACGAGTAGAGAGTACGTCATAGCTAGGGTGGAAATCAGCAGTATCAGAATTGTGCAATGAGGTAGATGAAGCAGGGAGTGGTGGTTTAGGATTGGCAATGGGGAGAAAAATTGTTCCTAAAGGTGATAGCCAGCTTGTAAAGGAACAAGGATTTGAAGACTTGTCCTTTGCTAAAGAGAATTAGGGATTTCAATTTAAATGGGAAGCATACTGAATTTAATCTTGGCTCTAGGGTGTCAGAACTTTGAGAAATTCTATTTTGGGATTGTTATGTATTAGAAATATTTGTGGTGTGCTGAGATGAAAACTGGAAATGCCCACAAGTAAGATAATTTGATTAGGTACATGTGAATAATTAATGTCAATCAGTTAAGCAAACCTATTTTATATTGTATGGTTGGCATTCTTTAGTGTGCCTCAAAATGTGGTAAAACCACCTCTTGCATCAGAGTGTGGGGTTAAGGGTGATTAAAGTGCAGGTTCCTGGGTACCACGACAGACCTAACTCAGAATCTCTTTGTGGGGAGGGTCTGGGGTCTGCATACACTCCATTGGATAATTTTCAGGGCTGCTGTTGCTGTGCCAAGCTTTTGTTTTATAAGTGAGGAGGATTTGATAGGTGGATTCTACACTGAAGTATAATTGGTTGAGCTGTTTCTATGGTTAGTCAGAACTTCATTTGATTGGTGAATTCCAGGAGTAGGCATCCATTAAATTGTCAGTGAATTGAAATTTCAAACTAAAGTCTTCTAGTGCTGTTATTTGAAACTTTATATTCTGTTTTCAGTCCCTGATTATCTTCACATCCCATTTCATTTATTACGCAATTGCAAATCACATTTTCCCTGCTATTTTAATACAAAAATATTACTAAGAATCTTAGTATTGATTCAAAGCTGCTAATTTTGATTCCTAGTTAAAAGCAGGACTGTGCTTTTGAGAACATAATTATAATTGAAAATTCAACATTTTGAATTTGTCAGGGTTATAATAGAGCATTGTCGGTAAATGTATTCAGCCTTGTAAATTGAGGTGACTAAACCATCTGCGTAAAAACTTGTCTTTTTAATTCATGTGTAAAAGTTTATTGCTGTTGTTTGGAACTATGGTTGTGTTAGTTTTGAGCAAAATGTTCGCCCCTGCTGCGCATAGTATTCTGGCATTAGATAGCTCTTGTTTTGATTGGAAAGAGTAATCTTTGTTATAAGTTTCTTGTTTTGTTTTCTTATTTTACACATACACTTCTTCATTCAGATCTTTTTTTCCATTCAGTTCTTTTAAAGATATAGGAGAATTTGCTAATGGAAATAGAATAACAAAAGAAAGCAGTTGAAATCTACAGAAGTGGCTTTAGCAATAACACTGTTTATAACTTTTCTAATACAGCTGAATGAGGGTGGTAGAAAAGTTAGTCTAGGTTTGCCATAGATAATCTAGAATTGACTAACTTAAAAGTTAGCCTTTGCCTTTAATACCTAAGAGCTTGAATTATGGTGTTTCTATGTTAAAAATGGTAATAGGTGTGTTGAAGTGGAAGAATCAGACAGACATTGGATATATTCAAAATGTGTTTTGTTCAAGTTGTAAGATACTATTTGTCATCTCAGTTATGTTAATTTAGCTATAAATTAACATAGCAGTCTTTCATTCCCACTACAGCCTTAATGTTGAGGAGTCTTTCGGACATTGGTTGTAGAGCTGGAAACGTACAGGTCACAGTCGAGCCCCCTGTGAGTGTTGACTCTGTCCCAGAGCTGACCAGGCGGAACCCTGGAAAGCTGGCACACACGTTCAAAGGCAGCATGGGGAGCCTGTGGGTTGTCCCTCTCTTACGCAAGTAAACAGTCTCAAGAGTGGCAGGGCCTGTAGGCTTGTCCATACAGCAGTTCACTGTTGCATTTCAAGAAAGCATTCTAGATTTGCATAATCCTGAGATAAAATGGGTGAAACAGACTTTTTTTTTTTCCTGGGGAACTTCAGTTGTAGTGTCTCAAGTGCATTATAGACCCCTAAGTAGGCTACTGTATGCCGTGTTTTCCAGACTTGTTAACCATTTCTGGAAATCTCAAGAATGCTTCTCTAAATAGGAACGACTTTTCTGTTAGGACAGTCTTTGGAATAGGTACGGTTTTAAGGGCTAATTGTAAACATCTACTTGAACAAGGCATTGTGGGTATAAAATGGAATCTCTATTAAGTAACTGAGGGGTATTAAAAGACAGCTGGTGTACGAGTCTAATGTGTCCAGGAAGGAGGAGTTTGGGGTTACGTGCCCCTGGAGCAGGGGCACATGGAGTGGCTGCATTCTCCTGCACATCACAGTCATGAGGTAGGTCTGTAGGTCTGAAAGAGTAGGCCAGTGGGACCTCGCTTTTAGTAGCAGATGCTACAGAAAGACATGTAAGCATAGTAAAATCTGGGTGAGGCAGGTTTTTATAGGAGATGCTAGGCAAAGGGTATAAAGGTGAAGGAATAATTTTTTTCATAAGCTGAAAAAGTGTAAGTCGTTTGAATTAAGTGTTGCTCTGTTAATGCTTTTAAAAGCAGAATCTTTGGTTTCATTACAGTCAAAATGATTATAAAAAGCAACTATGGCTATTCCTATCTATGTGTCTTATGTATTAATGTAATATTATGGGGTTTGAATTTCTCAAGTATTTTTGTTTCTTAGTTTTATCATTAATATTAGAAAATGGAATGATTCTTTTAAAATTAGGACAAAATAGCAACTATAACAAAGTCTGGGTTTTTTTTCCTAAATGTATTTGGAACATAGAGAAATATCTTTCTTCTAGATAATGCTAGAAAGCTAACTAACCTCTCACTTAATAATGCTCCTAATCCACTGAAACAGTTTCTTCATTTTAAAATAAGTAAACAttttttaaactttttaaaaagattttatctatctattctcagagagggaatgggagggagaaagagagagagaatataaatgtgtggttgcctgtcacatggcccccactggggacctggcctgcaacccaggcatgtgccccaaccgggaatcaaacctgtgatgccctggctcacagcccgcactcaatccactgagccacgccagccagggctgagtaaacgtgttttaacTTAAAGCATCGTTCAACTTTTCAGACAGCTACAAAATGTATTTAAGAGTTAGGTATAAGTAGAAGCTCTCCTTTTTCTTTATATGCCAAGTGTTGACAAATGAGTCACACAGCAGGTTTTGAGTGACAGTAGGGTTAAGAAAATGCCTTCAGAGGACCTTGTAGTGTGATGTGAAAAACCTGACAGATCGATCTTAGTAACCAGAGGATAACACACGCCATAGCAGATCAGGGTACGTAGAGGAAGGCACACTGCGGGGCAGTTGGGGAGGGAGCAGATCTCCAGGAAAAAATAGGTCAAATGGTATAAAATTTGAGGTGTATccctggccagtctgattcagctggttaggaggcatcctgcaaactgaaaagttgctggtttgatttcacagtcggcatgtgtctgggttgcagtttggggctccagttggggcacatacaaatggcaaccaatcagtgtttctctccctctgccttcccttccccactctctagaatcaatgggagaaaaattttttaattttgaaatgtaaaaggaaaggtagaTGAAGACCACAGGATGGAAACCACTTGTCAGCTACATTACTTTCGGCAAGGCAAAGGTTCCGACGTATCTTGGAGCACGATTAGGGTTCTGAAGAATAAGGAGACACAGTGGGGATGGAGTATTTGGGTTGGATACATGATTCCATTTATCTTTGTAAGGGTGATGATACTAGAGTTTAAAGTAGATTTCTTCACTTTATTAAAGACATTTCAGTTTGCTAGAAATCATTCTATTAGAAATACTAAACTTGTAATGAAATAATTTGACTTTTGTGTAATTTGAAAAAGATTTACATTCGTGAGCTTTGCACTTTTCATAAGCTGCCTTTAGCTTTGTCCCACAGGTTTGGAAATGTAAGCATTTTGTAAAATAGTAAATGTCTTCTGAAGTAGGTTTTAAAGGGTTCAATAATCTCATCCTTTTAACTGGTACGGGTGTATCGTAGCTGTTGGGAATACTATTAATATTTTGTTTTCTTCATTCTTATTGCAGGAGGCAAGTGAAGCCTATCTGGTTGGCCTCTTTGAAGACACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAGAACGTGCTTAAGAATCCACTATGATGGGAAACATTTCATTCTTTAAAAAAAAAAAATTCTCTTCTTCCTGTTATTGGTAGTTCTGAACGTTAGATATTTTTTTTCCATGGGGTCAAAAAGGTACCTAAGTATATGATTGCAAGTGGAAAATAGGGGACAGAAATCAGGTATTGGCCGTTTTTCCATTTTCATTTGTGTGTGAATTTTTTTAATATAAATGCGGGGACATAAAGCATTAATGCAAGTCAAGGTGTTTCAGTGAACAAGTTTCAAGCAGTTCAACTTTATAACAATATAAATAAACCTGTTAAATTTTTCTGGACAATGCCAGCATTTGGATTTTTTTAAAACAAGTAAATTTCTTATTGATGGCAACTAAATGGTGTTTGTAGCATTTTTATCATACAGTAGATTCCATCCATTCACTATACTTTTCTAACTGAGTTGTCCTACATGCAAGTATGTTTTTAATGTTGTCTGTCTTCTGTGCTGTTCCTGTAAGTTTGCTATTAAAATACATTAAACTAT
>H3F3A_x2
GTGTTCGCAGCCGCCGTCGCTCTCTAACGCCAGCACCTCCTCCAGCTCGCCGAGCTCCAGCCGAAGGAGAAGGGGGGTAAATAAAGAGGTCCCTATACCATGGCTCGTACAAAGCAGACTGCCCGCAAATCGACCGGTGGTAAAGCACCGAGGAAGCAACTGGCACTTCGTGAAATTAGACGTTATCAGAAGTCCACTGAACTTCTGATCCGCAAACTTCCCTTCCAGCGTCTGGTGCGAGAAATTGCTCAGGACTTCAAAACAGATCTGCGCTTCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAAGCCTATCTGGTTGGCCTCTTTGAAGACACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAGAACGTGCTTAAGAATCCACTATGATGGGAAACATTTCATTCTTTAAAAAAAAAAAATTCTCTTCTTCCTGTTATTGGTAGTTCTGAACGTTAGATATTTTTTTTCCATGGGGTCAAAAAGGTACCTAAGTATATGATTGCAAGTGGAAAATAGGGGACAGAAATCAGGTATTGGCCGTTTTTCCATTTTCATTTGTGTGTGAATTTTTTTAATATAAATGCGGGGACATAAAGCATTAATGCAAGTCAAGGTGTTTCAGTGAACAAGTTTCAAGCAGTTCAACTTTATAACAATATAAATAAACCTGTTAAATTTTTCTGGACAATGCCAGCATTTGGATTTTTTTAAAACAAGTAAATTTCTTATTGATGGCAACTAAATGGTGTTTGTAGCATTTTTATCATACAGTAGATTCCATCCATTCACTATACTTTTCTAACTGAGTTGTCCTACATGCAAGTATGTTTTTAATGTTGTCTGTCTTCTGTGCTGTTCCTGTAAGTTTGCTATTAAAATACATTAAACTAT
>H3F3A_x3
ATGGCTCGTACAAAGCAGACTGCCCGCAAATCGACCGGTGGTAAAGCACCGAGGAAGCAACTGGCTACCAAAGCCGCTCGCAAGAGTGCGCCCTCTACTGGAGGGGTGAAGAAACCTCATCGTTACAGGCCTGGTACTGTGGCACTTCGTGAAATTAGACGTTATCAGAAGTCCACTGAACTTCTGATCCGCAAACTTCCCTTCCAGCGTCTGGTGCGAGAAATTGCTCAGGACTTCAAAACAGATCTGCGCTTCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAAGCCTATCTGGTTGGCCTCTTTGAAGACACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAGAACGTGCTTAA