Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tyw1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Also known as Rsafd1
Coordinate chr5:130284413-130370409
Strand +
Gene summary Predicted to enable several functions, including 4 iron, 4 sulfur cluster binding activity; FMN binding activity; and tRNA-4-demethylwyosine synthase activity. Predicted to be involved in wybutosine biosynthetic process. Predicted to act upstream of or within tRNA processing. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and respiratory system. Orthologous to several human genes including TYW1 (tRNA-yW synthesizing protein 1 homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tyw1

Retroname Coord Strand Genomic Region ENSG
Tyw1P1 chr11:45171636-45171782 - Intergenic
 ENSMUSG00000080981 UCSC

Expression

Transcript Sequences

>NM_178897.4
GGCGCCAGTTACGCCTACCTATTATGGgtcctctggatgtGTGGGACTTGTCGCCTTTGCTGTCACTGTGGATGAACAGGTTCTACATATATATGGGCTGTGCCCTGGGCCTTACCCTTTGCATCTGTGTCCAGATCATCAAGAAGCAGGTCACTCGTTCCCAGGAGAAACGTGTCCCAGGAGCTCCTGATAGCTCCCTCTCCCCTCAGAAGAAGCAGACACACGTTTCTGGAGTGAAGATTTTTTACGGATCTCAGACGGGCACTGCCAAGgGATTTGCAGTGGTTCTTGCCAAAGCTGTCACCTCTCTGGACCTGCCTGTGGCCATTATTAATCTGAAGGAATATGATCCAGATGACAGTCTGATAGGAGAGATCACTAGTAAAACCGTCTGTGCCTTCCTGGTCGCTACGTACACGGACGGCTGCCCTACAGAGAGTGCAGAGTGGTTCTGCAAGTGGTTAGAGGAATCAGCTAATGATTTCCGCTTTGGCAAAACTTACCTGAAGGGACTTCGCTATGCAGTGTTTGGCCTGGGAGACTCTGCCTACCGGAGCCACTTCAACAAGGTCAGCACGAACGTTGACAAATGGCTCTGGATGCTCGGTGCCCAGCGGGTGCTGACCCGAGGGGAAGGCGACTGCAATGCAGTTCAGAGCAAACATGGCAGCATCGAGGCCGACTTCACAGCCTGGAAGACCAAGTTCATCTCCCGGCTGCAGGCCCTGCAGAGAGGGGAGAAAAAGGCTTGTGGCGGGAACTGCAAGAGAGGGAAGTGTGAGTCGGCCCAGCATGGCCCAGGAGAGGCGCGGCCTCACCCGCAAGGCGAATTGCATCCTGGGGATGCTGAGGAGGAAGAGCCCTGTGAGAGCAGCAGCGAGGACGAGCTCGGGACCCAGGATTATCAGAGCCTGACTTCTGTGGTGGATGTTGAGGACCTGGGCAACATCATGAACCCCGTGAAGAGGGAAAAGagagaaaagtctCATCAGGACGGGAAAGCTGCCATGCAGAGGAACCCAGAGAAGACTGAGGACGGCGAAGGAAGAGCTATGATAACACCTGCTCTGCGGGAAGCCCTGACTAAACAAGGGTACCAGCTGATTGGCAGCCACTCTGGTGTGAAGCTTTGCAGGTGGACAAAGGTATTTATTGGTTTTATTcaaatattatttctattttctgcaacttatttatttttgtccatttattttgtgtgtgcgcacatgtgtggcGGTCAGAGCACAGCCTACAGGATTTGGTTCTCTTTGTGGGCTCTGGGGACCAAACTGTCTTTTAGTGTGACAGCAGCCACTTGGATGGCTCCGGTATGGTTCTCAGCAGTGCTGTTGTGGTATACTTCACATGCAGTACGTGGCTCACGTTAGTGTGTCGATAGCTATCGTCACAGTCTGACTTGAGGATCCCTCTCTGGAAGACAGGCCAGCATCAGCGTGCTCGAGTCTTCCCCCAGCTCTCATGAGCCATCGATCTGCCCATTGTCTCCACGTGAAGTGGCTCATTTGACATTTCAGAAGACTGGAGTCATAGGCGTGGCTCATTGCGCCGGCTGCTTTCTCTCACTGGTCTGATGTTCCTGTGGCAGAGCTGTTGGGCACCATGAATCCGCGTTTGATTCTCCACCGTGGCTGATGGCATTGTCTGTTATTCCTTGTCTGTTTACTGAGACGTTGATGGACACTGGGGTTGCTTGTGTGTTGGATGTTATGGGCGATGGCTCCGGGGACATCACTCCGTGGATGGATTTATGTGGTGCACACTTCCGCTGTCGCTGGTGGATCGCGGTGGCTTGTCTTTTTCCCCAATGAATTGTCTATTTTTCAAAGCGACGGTTCATTTTATGTCCCCACCAGCAGTGTTCTGAGGGTCCTGATTCACTCGCCACTCTCTGCAGTCTCCCTTCCCTACCCTTTTCCTGGTGATGTCTACCTCCGTAATCCAGGCTGCTCTCAAGTTTatgatccttttgtctcagcctatggacttatttatttgcttttgagGCCGGGTcacatgtagctctggctgaactTGAATTCATtccatagctgaggatgaccttgcttcccaaatgctgggattacacatgtaGTACCATGCCCGGTTTGTGTGGTCttggggcttgaacccagggcctcattccTGCCGGGTGAgcactctacctctgagctacatcccaaagAAACTATTTAATTCTAACTGGTTCCTCTTCCTTCTAAGGTACAAATATTCCTTAGAATATTAGAAAGAGATGTTTGCTCTGATAGTTTCTGTTGCTCCGTCTCCTTTTGGTGGCCGCCCCACACGTTAGTTAATGGTGGTTTCCACATGTCACATTCCCCATTGTTCTCTTTTCCAGTCCAGTGACTTTCACTGATGTCCAACTTGGTGCCTTCTGTGCACAGCCAGTAATAAGCAGTGTCTTTTTTACCATTGCTAAATTCAATTTTCAGATAGTAAATCACATGCATAATTTTGAAAGTTCGTGTTTCATCCAACCTATAATGATATGAAAGAGGAAGCACTTTATGATAAATCTGTATTTCCATGTAGAATGCTTAGATGCCTTGGGGAGGGGCTGGCTGCTGCGTCTAGATCTGCAGTCTCACTTCCTCCAAGGCcggctcctcttcctcctcttcctcttacacttccccctctttcttctcatcctctgtcttctctctcttttttctctttctctttttattcttcctcctcctcctcctcctgctcctcgaTCCCTATGTGTGGTGCTGAGCATCAAGCTGGAGTCTCCTCATCGGTGCTAGTCAGGCATTTTATCCCTGAGCCCTGCCAGCAGCCCTCCCACTCTAAGTGGATCCGTTTAAATCCGAGAAAGATCAGAAGACGTTTCTCTACATGGAAAGCAGTGAGATGCTTACTTATATCTGGTAAGACTAAGAGGGAAGCAGCCCACACCGAAGGAGGGCTGAGAGGGCCAGGGCTTCATTCAAGTGAAGAAAGTGAGGAAAGAGGCTGCACACAAAACACAGACTCAGACCTCATTCGTAACTCAATGGGTGTGAAGTCCTGAGAGGTCACCTGGTGTGGGCTTGGCATGGAATGACACAGAAAATCGACCTCATGTCTTGAAATGCCATGGCTCATGGTCcatgttttgtttataatttattttaattttaatgtaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacatgagtgtagtgctctcagtggccagaagagggcactgagtcCTTGGGCTGGAGTCAGAGGTAGTTGTGGGCtccctggtgtgggtgctgggaactgaacttgagccTTCTGCAGCAGTACCATGGGCTcgttgtctctccagccctgtttctgATTTGTAAGAAGACTTGGAGATCGTCTCCTTTAAGCCATTCCCACTGGACTAGGCCATGTGTTGAAAACAGGAATAATAGGAAGGCCTAGGCTACTGTGGATGGCACACCTGTGGTGACAGTTTCAGAGCGAGTGATGGGCAGCCCTAAAACAACTCAAACAGTGATCACTACAGGTAGATTTGTATTCATCCACTTACTTACTCGTGGGGATTATTAACAATATATGTGAGGTcagcagaatattttaaaaacagattatATTAATAAGAATTCTACAGGTTGTTATTTTCTTTACCTTTCTTGACTGTTTTGGATataaggtcttactgtgtagcccaggctggccttgaacttctggtcccgTTGAGTCCTGGGACTACAGATacacaccaccatacctggccatcTCGATGTCCAGCTACACACGAGCTGTCTTGCCTAAAGCTACCCTGTGACTCTGAAGGTGACAGTGTCTAGCTGAGCAGTTTGAGTCTGTGCCAGTCTCATACTTCCCATGTCCTGTCACCGTGGCTTCTTGTTCTCCTCTCTCTGCTGCCCTGCTGCCCATTCAGACTTATGATGCTTTGCCTTTCCCTTGCCCAGGACAACAGCTGGCAGCGGCCACCCCGGGCTGGcatgatggctcagtgtctaaggGTGCTTGCCACTGAGTCTGACCAGTTGCGTTCAGTAATCATGCatgacccatatggtggaaggagagaaccaagtctcacaagttgtcctcccGTATACAGAAGATGATGATGGATTTCCAGTAAAACATTCTGTCACTCGATCTGGCAGGGAAGCTACAGATACGTCCGTGGGGCTGTGGGAGTGGCTCAGTAGAGTACTTTCTCACATGCAGGAAGCCTTGGGTTCCTCCATCTCCAGCACTGGGTAAATTGGAGGGGTCGTGTACACTCACGTTCCCAGTACTCCTTAGAAGTGCTCAAGACACACTTGAACTTGGCTACATAGCGTGTGAACCCATCCTGTTatatgtaagaccctgtctcaaacaaagctcCCATGTAGACTTCCTGAAGGACAGGGTAGGCAAGGAAGTGAAGTCCCAGCCAGCAGCGCTTGTCACAAGTCTGACTGAGGTTGTCTTAAGATGAGTGGctgcgggggctggtgagatgtctcagtgggtaagagcactaattgctcttcaggaggtcctgagttcaaatcccagcaaccacatggtggctcacaactatccatagtagcatatgatgccctcttctggtgtctaaagacagctacaatgtacttacatgtaataaatcaattct