Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGN1
Plot displaying the genomic locations of a parental gene (in scaffold_m19_p_3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Phyllostomus discolor
Full Name N/A
Also known as NULL
Coordinate scaffold_m19_p_3:208067926-208073713
Strand +
Gene summary N/A

Retrocopy(s) from HMGN1

Retroname Coord Strand Genomic Region ENSG
HMGN1P2 scaffold_m19_p_1:1100461-1101207 + Intragenic
N/A UCSC
HMGN1P3 scaffold_m19_p_1:80335998-80336957 + Intragenic
N/A UCSC
HMGN1P4 scaffold_m19_p_2:136474655-136475595 + Intragenic
N/A UCSC
HMGN1P6 scaffold_m19_p_2:206602076-206602431 - Intragenic
N/A UCSC
HMGN1P9 scaffold_m19_p_3:135705692-135706657 + Intragenic
N/A UCSC
HMGN1P12 scaffold_m19_p_4:108504701-108505644 + Intragenic
N/A UCSC
HMGN1P13 scaffold_m19_p_4:98522602-98523587 - Intragenic
N/A UCSC
HMGN1P15 scaffold_m19_p_6:160457065-160457283 - Intragenic
N/A UCSC
HMGN1P16 scaffold_m19_p_6:78442379-78442539 - Intragenic
N/A UCSC
HMGN1P17 scaffold_m19_p_7:123818357-123818584 + Intragenic
N/A UCSC
HMGN1P18 scaffold_m19_p_8:103331220-103332166 + Intergenic
N/A UCSC
HMGN1P19 scaffold_m19_p_9:37496392-37497130 + Intragenic
N/A UCSC
HMGN1P20 scaffold_m19_p_9:52296531-52297600 - Intergenic
N/A UCSC
HMGN1P21 scaffold_m19_p_9:58384530-58385486 + Intergenic
N/A UCSC
HMGN1P23 scaffold_m19_p_9:73215094-73216075 - Intergenic
N/A UCSC
HMGN1P25 scaffold_m19_p_10:41880472-41881111 - Intergenic
N/A UCSC
HMGN1P26 scaffold_m19_p_10:53377910-53378666 - Intragenic
N/A UCSC
HMGN1P27 scaffold_m19_p_10:81856639-81857517 - Intergenic
N/A UCSC
HMGN1P1 scaffold_m19_p_1:103241129-103241427 - Intragenic
N/A UCSC
HMGN1P5 scaffold_m19_p_2:19943291-19943495 + Intragenic
N/A UCSC
HMGN1P7 scaffold_m19_p_2:25780556-25780850 + Intergenic
N/A UCSC
HMGN1P8 scaffold_m19_p_2:62565721-62566024 + Intergenic
N/A UCSC
HMGN1P10 scaffold_m19_p_3:200333680-200333980 + Intragenic
N/A UCSC
HMGN1P11 scaffold_m19_p_3:39042481-39042626 - Intragenic
N/A UCSC
HMGN1P14 scaffold_m19_p_5:125211581-125211729 - Intergenic
N/A UCSC
HMGN1P22 scaffold_m19_p_9:62073778-62073992 + Intergenic
N/A UCSC
HMGN1P24 scaffold_m19_p_9:96614301-96614503 - Intergenic
N/A UCSC
HMGN1P28 scaffold_m19_p_13:50224423-50224640 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>HMGN1_x1
GCCCGGGCCTGCCGCGGCGCTCTGCAAGGCCCAGGCCTGGCGCGTCCACGGTGGTGCTTGGCCCAGGGGCCACCCCGAGGCCTGCGACAGGCGGGCGGGTGCCCCGTGGCCTCATGAGCCGTGGTTTGCAGCGTTCGGCTGCCCGAAGATCCGGGTGGGAGATTCGAACGCGGCGGCGGGAAGCCCCTGACGTCACGCGGCCAGGCATTGTTCTGGCGGGTGGGCGCGCAGGGCGCTGGGGCACTTTTGTTTGCGGGTAGTTCCCACTCGTGGTGTGCTTCCTTCCACAGGTCAGCTCCGCCGAGGGGGCGGCGAAGGAGGAGCCCAAGAGGAGATCTGCGAGGTTGTCAGCTAAACCCGCTCCTGCAAAAGTGGAAGCCAAGCCAAAAAAGGCGGCAGGAAAGATTCTTCAAACACCTAAATGATAACGATAAACTCAAAATTGATCCTTTTAGCTACTCATTACATGATAGTCAACCTGACCCTACAACATGGTGCTTTTTTCAGGACAAGTCTGCAGACAAAAAGGTGCAAACGAAAGGGAAAAGGGGAGCAAAGGGAAAACAGGCCGAAGTGGCTAACCAGGAGCCTAAGGAAGACCTACCTGCGGAAAACGGAGAAACTAAAAACGAGGAGAGTCCAGCCTCGGATGAAGCAGGAGAAAAAGAAGCCAAGTCTGATTAATATCATATATCATGTCTTATCAGTGGTCCCTGTCTCCCTTCTTGTACAATCCAGAGGAATATTTTTATCAACTATTTTGTAAATGCAAGTTTTTTAGTAGCTCTAGAAACATTTTTAAGAAGGAGGGAATTCCACCTCATCCCATTTTTTTAAGTGTAAATGGTTTTTTTTAAGAGGTGAAATCATTTGCTGGTTGTTTATTTTTTGGTACAACCAGAAAATAGTGGGATATTGAATATGGGAGGCTTTGATTGTCTTGGGTGCCGGCTAAACATTCCATAGACGGGGGTAGTTTTTATATCCTATAACACAAAGCATACTAAATGGCAATTTGGAGTCAGTTGTGCATTTACTATGTCTCGAACATTTTAAATTACTTCTATTCTCATGTTTTTGGTAGAAGTGTTTCCTAAAGAAAACCACTCCTTGATCTTGGCTGCCCCCCATCAGAACTTTGTGCACTCTGTAACATCTTGTTGTGGTAGTCCAGTTTTCCTAGTAACTTCGTTAATGTGCTGTGAAAGATTGAAAATTCGATTATGTAGTATATATATTAAATTGTGAATTAGTCAGGCTTTGATGTAACAGCGTATCAGCATTTGCAGATATTGGTACTTGATACATAAGAGTATCCTTAATAAGATAAGGAAATTAGTCCCCAAATTTTAAGCTGGAAAGTCACTGGAATAACTTCAGAAAAGAATCATAACTACATGATTTTACATTTTTGGTACGTATGTTAAGAATTGTGTACAAATTGAAATGTCAGTGTACTTATCTTCAGAACAACCAATAAAATCTCACTTAT
>HMGN1_x2
ATGCCCAAGAGGAAGGTCAGCTCCGCCGAGGGGGCGGCGAAGGAGGAGCCCAAGAGGAGATCTGCGAGGTTGTCAGCTAAACCCGCTCCTGCAAAAGTGGAAGCCAAGCCAAAAAAGGCGGCAGGAAAGGACAAGTCTGCAGACAAAAAGGTGCAAACGAAAGGGAAAAGGGGAGCAAAGGGAAAACAGGCCGAAGTGGCTAACCAGGAGCCTAAGGAAGACCTACCTGCGGAAAACGGAGAAACTAAAAACGAGGAGAGTCCAGCCTCGGATGAAGCAGGAGAAAAAGAAGCCAAGTCTGATTAA