Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Sarcophilus harrisii
Full Name N/A
Also known as -
Coordinate chr3:434645247-434651967
Strand +
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P3 chr2:611871789-611872748 + Intragenic
 N/A UCSC
HMGB1P5 chr4:283962064-283963669 + Intergenic
 N/A UCSC
HMGB1P6 chr4:378669411-378669952 - Intragenic
 N/A UCSC
HMGB1P7 chr5:242682376-242683710 + Intragenic
 N/A UCSC
HMGB1P8 chr5:260517679-260517856 + Intergenic
 N/A UCSC
HMGB1P1 chr1:708074927-708075423 - Intergenic
 N/A UCSC
HMGB1P2 chr2:356726156-356726741 + Intergenic
 N/A UCSC
HMGB1P4 chr3:244243858-244244379 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>XM_031960743.1
CAATGGGAGCAGCGCTGCCTGGAGAGTAATGTTACAGAACGGAGAGAGTGAGGAGGCTGCGTCTGGCTCGCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTAAGAGCCGGACGGGCACTGGGCTACTCTGTGCGGCGCTGAGGGAAAGTAATCAAAATGGGCAAAGGTGATCCTAAGAAGCCGAGAGGGAAAATGTCTTCATATGCCTTCTTTGTGCAAACCTGCCGGGAGGAACACAAGAAGAAGCACCCAGATGCTTCTGTGAACTTCTcagaattttctaaaaaatgCTCAGAAAGGTGGAAGACAATGTCTgctaaagagaaaggaaaatttgagGACATGGCAAAAGCTGATAAGGTTCGttatgaaagagaaatgaaaacctACATACCACCTAagggagaaacaaaaaagaagtttaagGATCCCAATGCACCGAAGAGGCCTCCttcggcatttttcttattctgttctgAGTATCGTCCAAAAATCAAAGGGGAGCATCCTGGGCTTTCTATTGGAGATGTGGCAAAAAAATTGGGAGAAATGTGGAATAATACTGCTGCAGATGACAAGCAACCTTATGAAAAGAAAGCAGCTAAActgaaggaaaaatatgaaaaggATATTGCTGCATACCGGGCTAAAGGAAAACCTGAtgtgggaaaaaaaggaggagttGTCAAGGCTGagaagagcaagaaaaagaaggaggaggaggaagatgaagaagatgaagaagacgaggaggaagatgaagaagatgatgaggaggatgaggaagatgatgatgacgatgaatAAGTTGGTTATAGAGCAgtttttttcttgtctataaagCATTTAACCCCCCTGTACACAACTCactccttttaaagaaaaaaaaaattgaaatgtaagGCTGtgtaagatttgtttttaaactgTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTTTAGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGTAGTTCATTTTCATCTTCAGTTGTCTTTGATGCAGCATATGAAATAATTGTTGTTCTGTTAACTGAAATACCACTCTGtaattgcaaaaaaaacaaaaaacaaaaaaaagttgcaGCTGTTTTGTTGACATTCTGAATGCTTCTaagtaaatacaattttttttttattagtattgtTGTCCTTTTCATAGGTGCCCTTAAATCATAACTTTCTTTTTGAGGGGAAGCTCGTCTTTGCTTTTGTATGCCCATTTGGGATCACATGAATTATTACAGttttcatcttttcatatagTTAGCCGATAAAAAGCTTTGATCTACACACCCTGCATAATTGTGATGGGGTAATAAAAGTTGTATAGAAACAATCTTCCATAACTGGAAATTGAAAGTTACCAGTTAATAAACTCAAAATTTCACatagtccagtattctatccagtTACAACATTTAACCAAGAGGAGAACATAGAGATTTGCAGCATGGAATTATTTGAATGAAACGTACTAAAATTATGTCCTTGAAGGACCAGTAGAAGGGTATATTCTAATCTTTATGTGGGGGATATATATTCATAACTTCATTACTATGTAACTGAAGTTATGTTTATAATTCCCATCCTTTAGAAGAGCTGAGGAATGTACCCCAAAAGCGTGAGTTGAAAAATACAAGACTGCCATGTTAATCTTTGGCAGTGGATTGTAGATTAAGTACGCTTATAGTATGAAGAGCTGGCAATGAATGACCCCTTGGGAAACTTGAGATTATATATGGtaccatttataattttaaatctagaTTTGATtgtcaaaacaaaattataattcaGTCTCATTTAGAGTGAGTCATGTTTTTCCCATTAGGGTTTACATTAAAATTGTAATATTTGACCCTATATAAATTAAGCAGACCATGATGggaaatatacttaaaatttGGCATTAAGGTAAGATGTAGACCAAATGTCTCAATTTGatcaaatttctttcctttccaaaacCAAAGCTAACAGTGTATTCATTAAAACTGACCATTTATATGTTTACCTGCTTTCCATTTTGGGGGACAATTTGGCAGTTTTGTGGTTTTGAAATTATGGTTCTCTTAAGTGCCAGTGTTTTAAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTACTGTTTTGTTATACAATTTTGACTTTCAGATTCTAATTTCAGTTTTGCATTTGTTTATGTATAATTTCAGGAAGAATACTGAACATCTGAATCCTGAATGATACTAATAAACTAATAATTGCAGAGGT
>XM_031960744.1
acacaaaGGGAAGGAGCCATATTCTCGCTCTCACTCTCGCCCTCTCGGCGGCGCAGGCGAGGAAGACGAGCAGCGGCCATTCCGTGCGCGCCGCGCCGCCGGGAAAGTAATCAAAATGGGCAAAGGTGATCCTAAGAAGCCGAGAGGGAAAATGTCTTCATATGCCTTCTTTGTGCAAACCTGCCGGGAGGAACACAAGAAGAAGCACCCAGATGCTTCTGTGAACTTCTcagaattttctaaaaaatgCTCAGAAAGGTGGAAGACAATGTCTgctaaagagaaaggaaaatttgagGACATGGCAAAAGCTGATAAGGTTCGttatgaaagagaaatgaaaacctACATACCACCTAagggagaaacaaaaaagaagtttaagGATCCCAATGCACCGAAGAGGCCTCCttcggcatttttcttattctgttctgAGTATCGTCCAAAAATCAAAGGGGAGCATCCTGGGCTTTCTATTGGAGATGTGGCAAAAAAATTGGGAGAAATGTGGAATAATACTGCTGCAGATGACAAGCAACCTTATGAAAAGAAAGCAGCTAAActgaaggaaaaatatgaaaaggATATTGCTGCATACCGGGCTAAAGGAAAACCTGAtgtgggaaaaaaaggaggagttGTCAAGGCTGagaagagcaagaaaaagaaggaggaggaggaagatgaagaagatgaagaagacgaggaggaagatgaagaagatgatgaggaggatgaggaagatgatgatgacgatgaatAAGTTGGTTATAGAGCAgtttttttcttgtctataaagCATTTAACCCCCCTGTACACAACTCactccttttaaagaaaaaaaaaattgaaatgtaagGCTGtgtaagatttgtttttaaactgTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTTTAGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGTAGTTCATTTTCATCTTCAGTTGTCTTTGATGCAGCATATGAAATAATTGTTGTTCTGTTAACTGAAATACCACTCTGtaattgcaaaaaaaacaaaaaacaaaaaaaagttgcaGCTGTTTTGTTGACATTCTGAATGCTTCTaagtaaatacaattttttttttattagtattgtTGTCCTTTTCATAGGTGCCCTTAAATCATAACTTTCTTTTTGAGGGGAAGCTCGTCTTTGCTTTTGTATGCCCATTTGGGATCACATGAATTATTACAGttttcatcttttcatatagTTAGCCGATAAAAAGCTTTGATCTACACACCCTGCATAATTGTGATGGGGTAATAAAAGTTGTATAGAAACAATCTTCCATAACTGGAAATTGAAAGTTACCAGTTAATAAACTCAAAATTTCACatagtccagtattctatccagtTACAACATTTAACCAAGAGGAGAACATAGAGATTTGCAGCATGGAATTATTTGAATGAAACGTACTAAAATTATGTCCTTGAAGGACCAGTAGAAGGGTATATTCTAATCTTTATGTGGGGGATATATATTCATAACTTCATTACTATGTAACTGAAGTTATGTTTATAATTCCCATCCTTTAGAAGAGCTGAGGAATGTACCCCAAAAGCGTGAGTTGAAAAATACAAGACTGCCATGTTAATCTTTGGCAGTGGATTGTAGATTAAGTACGCTTATAGTATGAAGAGCTGGCAATGAATGACCCCTTGGGAAACTTGAGATTATATATGGtaccatttataattttaaatctagaTTTGATtgtcaaaacaaaattataattcaGTCTCATTTAGAGTGAGTCATGTTTTTCCCATTAGGGTTTACATTAAAATTGTAATATTTGACCCTATATAAATTAAGCAGACCATGATGggaaatatacttaaaatttGGCATTAAGGTAAGATGTAGACCAAATGTCTCAATTTGatcaaatttctttcctttccaaaacCAAAGCTAACAGTGTATTCATTAAAACTGACCATTTATATGTTTACCTGCTTTCCATTTTGGGGGACAATTTGGCAGTTTTGTGGTTTTGAAATTATGGTTCTCTTAAGTGCCAGTGTTTTAAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTACTGTTTTGTTATACAATTTTGACTTTCAGATTCTAATTTCAGTTTTGCATTTGTTTATGTATAATTTCAGGAAGAATACTGAACATCTGAATCCTGAATGATACTAATAAACTAATAATTGCAGAGGT