Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name NPM1
Plot displaying the genomic locations of a parental gene (in scaffold_m19_p_13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Phyllostomus discolor
Full Name N/A
Also known as NULL
Coordinate scaffold_m19_p_13:35190599-35208085
Strand +
Gene summary N/A

Retrocopy(s) from NPM1

Retroname Coord Strand Genomic Region ENSG
NPM1P6 scaffold_m19_p_4:172340473-172341317 + Intragenic
N/A UCSC
NPM1P7 scaffold_m19_p_4:191278405-191278986 - Intragenic
N/A UCSC
NPM1P9 scaffold_m19_p_5:31790797-31791197 + Intragenic
N/A UCSC
NPM1P2 scaffold_m19_p_2:35414070-35414595 - Intergenic
N/A UCSC
NPM1P4 scaffold_m19_p_3:195588054-195589362 - Intergenic
N/A UCSC
NPM1P5 scaffold_m19_p_4:112892433-112892622 + Intragenic
N/A UCSC
NPM1P10 scaffold_m19_p_5:50988604-50989227 + Intergenic
N/A UCSC
NPM1P12 scaffold_m19_p_7:112641721-112642397 + Intragenic
N/A UCSC
NPM1P14 scaffold_m19_p_9:16344766-16346015 + Intergenic
N/A UCSC
NPM1P17 scaffold_m19_p_14:10687275-10688543 - Intragenic
N/A UCSC
NPM1P11 scaffold_m19_p_6:85640744-85642019 - Intragenic
Intragenic
N/A UCSC
NPM1P13 scaffold_m19_p_7:113416075-113416608 - Intergenic
N/A UCSC
NPM1P1 scaffold_m19_p_1:40473773-40474640 + Intragenic
N/A UCSC
NPM1P3 scaffold_m19_p_2:90546424-90546758 - Intragenic
N/A UCSC
NPM1P8 scaffold_m19_p_4:80556133-80556389 - Intragenic
N/A UCSC
NPM1P15 scaffold_m19_p_11:16968937-16969119 - Intragenic
N/A UCSC
NPM1P16 scaffold_m19_p_11:7352566-7352937 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NPM1_x1
GGTGCGATTCCGTCCTGCGTGTCTGTTCTGCGGAACAGAAGTCGCGTACCTCCGTCCGCCTTCTCTCCCACCTAAGTGCGTGCTACCACCCCATGGAAGATTCGATGGACATGGATATGAGCCCTCTGAGGCCCCAGAACTATCTTTTCGGCTGTGAACTCAAAGCCGACAAAGACTATCACTTTAAGGTGGATAACGATGAAAACGAGCACCAGTTATCTTTACGAACGGTCAGTTTAGGGGCTGGCGCGAAGGACGAGTTGCACATTGTGGAAGCAGAAGCAATGAATTACGAAGGCAGCCCCATTAAAGTAACGCTGGCAACTTTGAAAATGTCGGTACAGCCAACGGTTTCCCTTGGTGGCTTTGAAATAACACCACCCGTGGTCTTGCggttgaagtgtgggtcagggcccgtgcatattagtggacagcacttagtagCTGTggaggaggatgcggagtcggaggacgaggaggaggaggaCGTGAAGCTCCTGAGCATGTCCGGGAAGCGCTCGGCCCCCGGGAGCGGCAGCAAGGTCCCACAGAAAAAAGTAAAACTTGCTGCGgatgaagatgatgaggatgacgacgaggacgacgatgatgatgaagatgatgatgacgatgattttgaggatgaagaggctgaagaAAAAGCTCCAGTAAAGAAATCTATACGAGATACTCCCGCCAAAAATGCACAGAAATCCAACCAGAATGGGAAAGACTCAAAACCATCAACACCCAGGTCAAAAGGTCAAGAATCCTTCAAAAAACAGGAAAAAACTCCTAAAACACCTAAAGGACCTAGTTCTGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGAACATTGAACAATCCTGGGCACTACTGGTAAATTAAGTCCAAAGATGGGGAAAGAGGAAAAGGAGAGAAATGTAGTCCATACTGAGTACCATCAGCAACCCAGACTGGCGTCTTCCATTTTAATCTCAGGCCCCTGTCCTGATTGGCCGCTCGGCCTGCCCCTCCGGGCCGGACAcgccccccgcccgccctcccgcAGCGCTTTGCCTCTGACCGCTGTGCTTCCCCGAACTTTTCTTGCCGCTGTCATCGCCTTACTTTTTTGACCATGTTTTAAACACCTTTGTATCCCCCTAGCTGCTCAATAAATATTTGAA
>NPM1_x2
CCCTGGTGCGATTCCGTCCTGCGTGTCTGTTCTGCGGAACAGAAGTCGCGTACCTCCGTCCGCCTTCTCTCCCACCTAAGTGCGTGCTACCACCCCATGGAAGATTCGATGGACATGGATATGAGCCCTCTGAGGCCCCAGAACTATCTTTTCGGCTGTGAACTCAAAGCCGACAAAGACTATCACTTTAAGGTGGATAACGATGAAAACGAGCACCAGTTATCTTTACGAACGGTCAGTTTAGGGGCTGGCGCGAAGGACGAGTTGCACATTGTGGAAGCAGAAGCAATGAATTACGAAGGCAGCCCCATTAAAGTAACGCTGGCAACTTTGAAAATGTCGGTACAGCCAACGGTTTCCCTTGGTGGCTTTGAAATAACACCACCCGTGGTCTTGCggttgaagtgtgggtcagggcccgtgcatattagtggacagcacttagtagCTGTggaggaggatgcggagtcggaggacgaggaggaggaggaCGTGAAGCTCCTGAGCATGTCCGGGAAGCGCTCGGCCCCCGGGAGCGGCAGCAAGGTCCCACAGAAAAAAGTAAAACTTGCTGCGgatgaagatgatgaggatgacgacgaggacgacgatgatgatgaagatgatgatgacgatgattttgaggatgaagaggctgaagaAAAAGCTCCAGTAAAGAAATCTATACGAGATACTCCCGCCAAAAATGCACAGAAATCCAACCAGAATGGGAAAGACTCAAAACCATCAACACCCAGGTCAAAAGGTCAAGAATCCTTCAAAAAACAGGAAAAAACTCCTAAAACACCTAAAGGACCTAGTTCTGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGTGACGGAGGCAGTTAAGTGTCAGGCACCGTACCTGATCCCTAGCCTGTTTCATGCCGTGGTCCCTTGGGCATTCCTGACGCCTTCTTGGCTTTCCAAAATGCATAAAAAGATTGAAGGGCGGCTCCCTTCCCAAAGTGGAAGCCAAGTTCATCAATTATGTGAAGAATTGCTTCCGGATGACTGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGAGGAAGTCTCTTTAAGAAAATAGTTTAAACAGTTTGTTAAAATTTTCCGTCTTGTTTCATTTCTGTAACAGTTGATATCTGGCTGTCCTTTTTATAATGCAGAGTGAGAACTTCCCCTACCGTGTCTGATAAATGTTGTCCAGGTCCCATTGCCAAGAATGTGTTGTCCAAAATGCCTGTTTAGTTTTCAAAGATGGAACTCCACCCTGTGCTTGGTTTTAAGTATGTATGGAATGTTATGATAGGCCATAGTAGTAGCGGTGGTCAGACAGATGGGAACGGTGGGGAGACAGAAATATACATGTGAAATAAACTCAGTATTTTAATAAAGT
>NPM1_x3
TCCCTGGTGCGATTCCGTCCTGCGTGTCTGTTCTGCGGAACAGAAGTCGCGTACCTCCGTCCGCCTTCTCTCCCACCTAAGTGCGTGCTACCACCCCATGGAAGATTCGATGGACATGGATATGAGCCCTCTGAGGCCCCAGAACTATCTTTTCGGCTGTGAACTCAAAGCCGACAAAGACTATCACTTTAAGGTGGATAACGATGAAAACGAGCACCAGTTATCTTTACGAACGGTCAGTTTAGGGGCTGGCGCGAAGGACGAGTTGCACATTGTGGAAGCAGAAGCAATGAATTACGAAGGCAGCCCCATTAAAGTAACGCTGGCAACTTTGAAAATGTCGGTACAGCCAACGGTTTCCCTTGGTGGCTTTGAAATAACACCACCCGTGGTCTTGCggttgaagtgtgggtcagggcccgtgcatattagtggacagcacttagtagCTGTggaggaggatgcggagtcggaggacgaggaggaggaggaCGTGAAGCTCCTGAGCATGTCCGGGAAGCGCTCGGCCCCCGGGAGCGGCAGCAAGGTCCCACAGAAAAAAGTAAAACTTGCTGCGgatgaagatgatgaggatgacgacgaggacgacgatgatgatgaagatgatgatgacgatgattttgaggatgaagaggctgaagaAAAAGCTCCAGTAAAGAAATCTATACGAGATACTCCCGCCAAAAATGCACAGAAATCCAACCAGAATGGGAAAGACTCAAAACCATCAACACCCAGGTCAAAAGGTCAAGAATCCTTCAAAAAACAGGAAAAAACTCCTAAAACACCTAAAGGACCTAGTTCTGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGGCGGCTCCCTTCCCAAAGTGGAAGCCAAGTTCATCAATTATGTGAAGAATTGCTTCCGGATGACTGACCAGGAGGTAACTTGACTTTTCTCATGACCTAAGTCACTTTTATTGTGGTTTATTGTGATTGTTTCTGTCTCTTTTAAGTGTTGTGTGCTCTTTTAAAAGGTTCCTAACTATAGACAATACTTCAGATTAAATATATAGAAACACTAAAGAATTTAGTTGGAAGATACTTGAGAAGGCAACTTTTTTAGTATATTTTCCCCAGCTTTTACAAAGTTGGTAGATTATCTCTTGGTTCCTGAAGTCTGTTCTGCTTTCGGTATTCCGTTGGCTGAGGAAGCAGACTGTGGCTTTCCTTGCTGCTCCATTGGCTGCTTGGGGCGGCTTGGCCTTCGCTTCCCTGTGAGCCGGCCGAGGAGGACCACGCTGTCCGTCCGGCTCACGGGAGGCACGTTTGCCGAAATGAGCCTGGCATGCACACTCTGGACACGAGGCGCCAAATTGTGATTGATGCTCAGTATTTTTAGCTCGAGTCAGTTCTTAGGTTTTCTGTTCTGACACCTGAAGGTATTTTGTCAAAAGGAAATAGAGGCATTAATTTCGACTGTCTTACAGTTACTGAGTGTACAGGAAAACGGTGCAAGCGGTTAACACAGGGCTGCTAGGCCTCGTGAGTAGACCGGACACACCCTGCACTTTGTTTGTGTCGGGTCCCAGAGTTGCTCAGCTTTTTTCTAGAAAGAAACAAATTTGTCTGTTTCTCCTCCTGCCGTGATATTTAGTATTTCAATCACTTCAGCAGCAACACTTGTTCTCAGGTTTGATACCCTGTCAGTGGTTTAGCTCTTCACAGTGGCTTGTGAGTTCAGCCTGGGCTGGACTGGGTGGCCACGAGAGGGTCAAATTCTACCTTTTCAAATCTTTTGGTGGTCgtgtgtgtctgtgtctgtgtgtgtctttgtgtTTTTGAACCAAAAATGCAATTGTAAATTCTGTGCATTTTTCCGAGTAATTGGCAGTTATCAAACAGTCTGAAACTGCAGTGCGCAGCGGTTAACTTGGTGTTGAGAGTGGTGGGGAGTCCTACAGACCAGCATGAACCGGCCGGTGAGCGTGAGAGGCCCGGGTTTTCTTCGGCTTGCCCCACAGAAGCGGCGGAGTGAAACCTTGCGTGAGGAGAATTCAGGTGAAGATGGAAGGAGTCAAGTTGCAAGGCCCCACGTACAGGGTAACATCAGTCTCCCAGCTGAAAAGTGACCGAACTCACCGCTAACCGAAGTATTTTCTGACTCCAAAACTGAAAGTGTATTTTTAAGTGCCAGGATGAAATTTCTGCAATAGTAAAAAATGTAATGGCTCAATTTACTACTACAGAGATTATCAAAACTAAATGCCTCACGTTTTTATGGCATAGCTACAGATGCAAGTAATCACTATAAAAATTTTCCCATTGCTTGTGCAGTTTTTCTTGTGAAAATGTGTTGCTTATGAGGATTTGGCCAGTAAAATCCCTTCCAGATGGACTTGAGAAACAGCAAATTTTTTGCAGAAATTCTTGACTGAAGAGTTGGAAAAAGTGACAGTTTTTTGCGGAGAGAACACCGACACAGACCCGGGTGGGCGTGTGAAGGTGCACACGGCGGCGTCCAGGAGCAAAGCAAAGTGTGCGAGGCTCCGGGGCCCTGTGAGCCGTGCGGCCCCTGTTCGCCCTGAGGCTGGCTGGTCGGGCGGACTCGGCTGCGACCTCGGCTCTGGAGGTCGTGGGACTGTCCTCTTTGGCGTCACTGAGACGAGCACACGGGCTTTACGAGGAGAAAGAGAAATGCTGACGTGAAGTAGATGATGCTGCGTGTTTCACCTGAGGGGTTTAGTACATTCCTCCAGAAAGATGGGTTTTTACCACCTCTAAGGGATTGGGGTTTTGCGTGGTGGTTTCTGAGTGGGCCAGCACGCGAGCAAGTGCGGGTGGGGCGGCAGGAGGGCTAAGCCCCGCTCTGTGGGAAGGAGCGCAGTGACCGATGGGGGGAGCACGAGACCGGGCGGTTCGCCACGCTCACGGCCCTGAGCCCACTCTCGCCCCGCCCGAGTGCCGTGTGTGCGCTGAAGACCCGACGTACAGTATAGAGAACGTACAAGGGGGGGGTTGTAACCAAATTCCTTAAAACAGGGAACTGTTGCGATCCCACACCCTTGGGGAAATACAGAGATGACGGGAAAAGCTGTCATTTCAGATAAGCAGCTTTCCGTGTGTGTGTCCCGTGGGCCTGCGCGTGGGGTAGAAGCGAGAGTGTTGAGCcgtgtcccgtgttcgtgtttgtgtcctgtgctcatgtcccatgttcgtgtttgtgtccgtgttcACTAAGCCGGCCCGGCGGCCCCGGCCCCGGCCCTGGACGGTCTTCAGGAGAGACGTCTGAGCTGCTGACTGTGCCCCCGTACTGACTTTGCTTACAGAGAGTCATGCGATTTTATGTCAGAATTGAGGTATTGAAGATTGTGTCAGACTATAAATTTTTTTGAAATTCTTAATTACGTCGAGTGAACCTTTTTGGTGGTAGAATGAAAAATAGATGCGTTGACCCGTACAAAGAGACGTGGTTGAATTTATTGGTTGTCTGAAGTGCTGCGGTTCTTAACCACATTTCTTTCTCTTTTTTTCCAGGCTATTCAAGATCTCTGGCAGTGGAGGAAGTCTCTTTAAGAAAATAGTTTAAACAGTTTGTTAAAATTTTCCGTCTTGTTTCATTTCTGTAACAGTTGATATCTGGCTGTCCTTTTTATAATGCAGAGTGAGAACTTCCCCTACCGTGTCTGATAAATGTTGTCCAGGTCCCATTGCCAAGAATGTGTTGTCCAAAATGCCTGTTTAGTTTTCAAAGATGGAACTCCACCCTGTGCTTGGTTTTAAGTATGTATGGAATGTTATGATAGGCCATAGTAGTAGCGGTGGTCAGACAGATGGGAACGGTGGGGAGACAGAAATATACATGTGAAATAAACTCAGTATTTTAATAAAGT
>NPM1_x5
ATGGAAGATTCGATGGACATGGATATGAGCCCTCTGAGGCCCCAGAACTATCTTTTCGGCTGTGAACTCAAAGCCGACAAAGACTATCACTTTAAGGTGGATAACGATGAAAACGAGCACCAGTTATCTTTACGAACGGTCAGTTTAGGGGCTGGCGCGAAGGACGAGTTGCACATTGTGGAAGCAGAAGCAATGAATTACGAAGGCAGCCCCATTAAAGTAACGCTGGCAACTTTGAAAATGTCGGTACAGCCAACGGTTTCCCTTGGTGGCTTTGAAATAACACCACCCGTGGTCTTGCggttgaagtgtgggtcagggcccgtgcatattagtggacagcacttagtagCTGTggaggaggatgcggagtcggaggacgaggaggaggaggaCGTGAAGCTCCTGAGCATGTCCGGGAAGCGCTCGGCCCCCGGGAGCGGCAGCAAGGTCCCACAGAAAAAAGTAAAACTTGCTGCGgatgaagatgatgaggatgacgacgaggacgacgatgatgatgaagatgatgatgacgatgattttgaggatgaagaggctgaagaAAAAGCTCCAGTAAAGAAATCTATACGAGATACTCCCGCCAAAAATGCACAGAAATCCAACCAGAATGGGAAAGACTCAAAACCATCAACACCCAGGTCAAAAGGTCAAGAATCCTTCAAAAAACAGGAAAAAACTCCTAAAACACCTAAAGGACCTAGTTCTGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGGCGGCTCCCTTCCCAAAGTGGAAGCCAAGTTCATCAATTATGTGAAGAATTGCTTCCGGATGACTGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGAGGAAGTCTCTTTAA