Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rrp8
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal RNA processing 8
Also known as 1500003O22Rik|2900001K19Rik|NML
Coordinate chr7:105380937-105386592
Strand -
Gene summary Predicted to enable methylated histone binding activity. Predicted to be involved in several processes, including cellular response to glucose starvation; intrinsic apoptotic signaling pathway by p53 class mediator; and regulation of gene expression. Predicted to act upstream of or within chromatin organization; methylation; and rRNA processing. Predicted to be located in cytosol; nucleoplasm; and plasma membrane. Predicted to be part of chromatin silencing complex. Predicted to be active in nucleolus and rDNA heterochromatin. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and immune system. Orthologous to human RRP8 (ribosomal RNA processing 8). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rrp8

Retroname Coord Strand Genomic Region ENSG
Rrp8P1 chr2:96870658-96871568 + Intragenic
ENSMUSG00000090449 UCSC

Expression

Transcript Sequences

>NM_025897.2
TGCCTCTCTAGCTCGCCAGCGGCTACGCTCTATGGTGCTCTGCTCCGCGAAGGCCGCTCTAGCTACCACAGAATTTCACTCGGTGGCTTCCGGCCCGGTTTGGTCCGACTCCAGCCCTAGGATTCCCTGACGCGCGCTGCACGTGGGCCAGAGCGTAGGCTCCTCCGGCCCTGCGGGCTACGGGTGGTATGTTCGAAGAGCCCGAATGGGTGGAGGCGGCCCCAGCCATCGTGGGCCTAGGGGCCGCGACAGCACAGGTTAGGCCGGCGACTGCCCCGCCAGTCAAGGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATCTCTCTCCCAACAAACCCCCAGCCTACCTGGCAGTGactctgaggaggaggaggaggtaggaaggaagaagagacaccTCCAAAGGCCCTCACTTGCCAGCGTCTCAAAGGAagtagggaagaaaagaaaagggaaatgtcAGAAACAGGCGCCATCCATCAGTGACTCTGAGGggaaagaaataagaagaaaatgcCACAGACAAGCTCCTCCTCTTGGTGGGGTCTCTgctggagaagaaaaaggaaagagaaaatgccaGGAATATTCCTCTTTACACCTAACCCAGCCCCTGGACAGTGTTGACCAAACAGTTCACAATTCCAGGACGAGTACTGCTACAATTGACCCATCCAAGCCAAGCCCTGAGTCTATGTCACCTAACTCCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGGTGCCTCCTGTCCCAAAGTCAGATAGTCAAGAGTCTAGAGCTGGAGCCCTGCGAGCACGCATGACACAACGCCTGGATGGGGCCCGATTTCGCTACCTTAATGAACAGTTGTACTCAGGGCCCAGCAGTGCTGCCCGACGCCTATTCCAGGAAGACCCTGAGGCTTTTCTCCTTTATCACCGTGGCTTCCAGAGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCTGCATCCTTAGTGGTAGCTGACTTTGGCTGTGGAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGCTTCTCTGGACCCCAGGGTCACAGTATGTGACATGGCCCAGGTGCCTCTGGAGGATGAATCTGTAGATGTGGCTGTGTTTTGCCTTTCACTGATGGGAACTAACATCAGGGACTTCCTTGAGGAGGCAAATCGAGTGCTAAAAACAGGGGGTCTTCTCAAAGTAGCTGAAGTCAGCAGCCGCTTTGAGGATATTCGGACCTTTTTGGGGGCTGTGACCAAACTCGGCTTTAAGATTATCTACAAGGACCTGACCAACAGCCACTTCTTCTTGTTTGACTTTGAAAAGACCGGACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAGGCCTTAAACTTCAGCCCTGTCTCTACAAGCGCAGGTGACCGATGGACACCCATTGGAAGGGGAGAGCTCAGACTCCAGTCTCAGAACTCTGAAGACTGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAGCTCTACTCTAATGGAGCCTTCTTGGATACAGAAAGCATAAAATTACTTGGGCAGGCTCAAGAATGAGGTGTTTATTGTGAGGGCATGGATGTGTCTAATAATTGTGGGTCACTTCAGTATTGTGGAAACTAGTCGGCTGAGAACTGATGGATCTCTGGGTTTgctttctcttcatctctcagaagGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGGGCTGGGagttatttaatttctttgtttcttggagctgggaatcatctaatttttttctgtgttgctattgttgttgttgttgttgttgttttgagacagtatctcacactagtccaagctgacctcaaacaaaacaaatggcaatcctcctgcctcagcctcctgattaTTGGGAacacaggcatgggccaccatatTTAGCTGAAGAAATCATTTACTTTCTGAATATTCTATTTCTCATTTGAAAAATGTAACCTTCTTGTCTTACAGTATGTTAAATGGGTTCACTGAGGAAAGCTACAGCTAGAGCTGGGACTAGTAAGAGGTGCTGAATAAACCAGCTATGGCTATGTGTGTCGTTGATCTCACTGTGTCTGATCACCCCTACTGCCTTAACGGTTGAGCAATAAGTAATGTAGATGTGACCGAGAAAGACTGGGGGAGTTTGATATAGGCATGTAAACGGGCTTATTTGCTCTTTAGAGACTTAACGTGTTTGAAGCTTTCCTTGGAAGGGGGTAATACAGAAGCTGGAATCTGTTCAACAGCAGAAACTGATTGGGCTGCTTATTGGCACAGTCTGTGTGTCCTAGGAAAACTACAGGTACTGAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACACTGAGCTCATTCAGGAGGCGTCTGCCTTGAAACCAGGCATATAGGCTTGTTTACGACTTCCTAAGAATAAGACCTAGGAGTTTCCTCTAGGAGCAAATAGGTCTCGGGATTTTGAACCAGTTAGATGCCTCCAGGCCTAAAGGAATAAAGATTTTGAAAAAGGCC