Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TPT1
Plot displaying the genomic locations of a parental gene (in scaffold_m19_p_12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Phyllostomus discolor
Full Name N/A
Also known as NULL
Coordinate scaffold_m19_p_12:46504285-46512439
Strand -
Gene summary N/A

Retrocopy(s) from TPT1

Retroname Coord Strand Genomic Region ENSG
TPT1P5 scaffold_m19_p_1:40027356-40028101 - Intergenic
N/A UCSC
TPT1P8 scaffold_m19_p_3:89123706-89124441 + Intragenic
N/A UCSC
TPT1P13 scaffold_m19_p_5:27668906-27669752 - Intergenic
N/A UCSC
TPT1P14 scaffold_m19_p_6:94624677-94625401 - Intergenic
N/A UCSC
TPT1P16 scaffold_m19_p_7:57755768-57756554 + Intergenic
N/A UCSC
TPT1P19 scaffold_m19_p_8:81956993-81957746 + Intergenic
N/A UCSC
TPT1P20 scaffold_m19_p_10:41854986-41855722 + Intergenic
N/A UCSC
TPT1P21 scaffold_m19_p_10:60735486-60736288 + Intragenic
N/A UCSC
TPT1P25 scaffold_m19_p_13:25971042-25971772 - Intergenic
N/A UCSC
TPT1P26 scaffold_m19_p_14:8303657-8304357 - Intergenic
N/A UCSC
TPT1P1 scaffold_m19_p_1:110926683-110926982 - Intergenic
N/A UCSC
TPT1P2 scaffold_m19_p_1:115016895-115017294 + Intragenic
N/A UCSC
TPT1P3 scaffold_m19_p_1:122777602-122777888 - Intergenic
N/A UCSC
TPT1P4 scaffold_m19_p_1:36247425-36247780 + Intergenic
N/A UCSC
TPT1P6 scaffold_m19_p_1:93160167-93160448 - Intragenic
N/A UCSC
TPT1P7 scaffold_m19_p_3:40438704-40438970 - Intragenic
N/A UCSC
TPT1P9 scaffold_m19_p_4:101317093-101317268 + Intergenic
N/A UCSC
TPT1P10 scaffold_m19_p_4:154551538-154551782 - Intergenic
N/A UCSC
TPT1P11 scaffold_m19_p_4:91516248-91516539 - Intergenic
N/A UCSC
TPT1P12 scaffold_m19_p_5:169006202-169006457 - Intragenic
N/A UCSC
TPT1P15 scaffold_m19_p_7:2594822-2595245 - Intergenic
N/A UCSC
TPT1P17 scaffold_m19_p_8:100122019-100122304 + Intergenic
N/A UCSC
TPT1P18 scaffold_m19_p_8:72155622-72155940 - Intergenic
N/A UCSC
TPT1P22 scaffold_m19_p_10:64710145-64710441 - Intergenic
N/A UCSC
TPT1P23 scaffold_m19_p_10:72225315-72225634 + Intergenic
N/A UCSC
TPT1P24 scaffold_m19_p_12:47876566-47877070 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>TPT1_x6
GCAGCCGACTATGACGTAGGGGGACTTGCCCTCTATATGAGGTTGGGGAGCGGCTGAGTCGGCCTTTTCCGCCCGCTCCCCCCTCCCCTAGATCGCTGCTCTGGCTGCACCGCGCTCACTAGAGCTCCAGGCTCCTGCTCTGCCAGCGCCGGTGTCGTGTTCTTCCAGCCGCCATCATGATCATCTACCGGGACCTCATCAGTCATGATGAGATGTTCTCCGATATCTACAAGATCCGCGAGGTCGCAGACGGGCTGTGTTTGGAGGTAGAGGGAAAGATGGTCAGTAGGACAGAGGGTAACATCGATGACTCGCTTATTGGTGGAAACGCCTCTGCTGAAGGCCCGGAGGGCGAAGGAACGGAAAGCACTGTAATCACTGGTGTTGATATTGTTATGAACCATCATTTGCAGGAAACCAGCTTCACGAAAGAGGCTTACAAGAAGTACATCAAAGATTACATGAAATCTAACAAATTTGGCGATTTGGATCTATCACCTATCATCATAACTGGCTGCTGCTTTTCATCCACACACCAGGACTAGGACAAATGGGACTGATGTTACCTTGAGTTCGTCATTTATTTTGACCTTGATTTATATGGAGCGGAGGCATTGTTTTTAAGAAAAACATGTCGTGTAGGTTGTCTAAAAATAAAATGCATTTAAACTTATTTGAGAGAATGCCTCTTAGTTTAATACATATTTAAATCCATCCTGTACATAGTGTTCCTGGAGAAGCTAGGTTATAGATTACTACTACAGAGCATGACTATGTTCAGATAACGTCTACAATGAAAACTACTTCTGGGAATGGAATATAAAAAGCAAGGATCTTAATTCTGAGTTGAAGTAAAGGGAAAGATTACATGTTCACAGCAGAACCAACACGTGAAGTGGATTCCTTAAACGTTTTTCATCACCTACAAATGGAAGTAGTTAACTGGAAGAGATAACCAAAAGAAAAAGACCAACCCAGTTGGAAACAAAGTAGTGTCTGAGCTTATTTAAATAGCATACCAAGTCAGGACCAAGTTTCATAGAAATCTGGGTCTCCTGAAATTGTGTAATAGGCTTCTGTCAAACTCCTAGGATAGGGTTGGCAAACTGGCTCATCCTGCTACCTATTTTATGTGATTGAGGTGGTTACATTTTTGAATGGGGAAACTATAACTTAATGGGatatgaaattgatttggtgtccagctttatcaggatgctgccacaatcttttgtttatggattgactggctcttgacactacaatagcagagatgagtgtggtagaccttcagggcctgcaaatcctaaaataaatgtgtgtctcattgtaggacaggtttgttggcccttgCTTTTAAAAGATGAGGTTATTAGATGGAATGTGAGTTGGCTGTTGGGTGGAAGAAAAGGCAACTGCTTTGTGTATTACATCTGAATAAGGGTATGGAATGAAAGGGCAAAGTATTTGATCTGGGTAGTTACTATCTGCTAAGGTTCCAGGCCAGGTGAAAGAAAAAGGTTCCTGGCCCTGTCTGATGTGGCTGCCAAGGTTGAATTGGGGGGATGCAGTGGAAAAACATGGGAGTTTTTATAATTTAGAAATTACATTGTAAATAATTGAAATGTCTGTTTTACTCCAAAGAATGTAAAATGTGAGTTTACAAGAGAAGTTGGGGAATTATTCCCCTACACCATTGCCTTCTGAATGATTCTACATTTAAAACTTAAGGGTTAAAACTAAAGCCAGTGAttttttttaaaggtttttattattcatttggtttttagagggggaagggaaggagaaagaggaaatgaaacatcagtgtgtgggttgctttccacctctgtactggacgcctgggctgcaggcatgttccctgactgggaattgaatcagtgaccgtttggttcccaggctctcactcaatcacactataccagccaaggctAAAGCCAGTGATTTTAAAAAATCTGACCCTGTTACATGTGTTCCAGGGTAAATCCAAATATTTGACAATCTGGAATTTGCCCTAGTGCCTTCAAAGATGTGTGGCTCAGAATTTGAGATAGTCAGAAATGCCCACTGGTGATTGCAAGCAAACCTAAATACTGGAAACTGGTGACAGTTTTAAGCGTTCTGATTTCTGACATTAAAATGTACAAAAAGTACCAGTCACTGGTTTGAGGAGGCCACTCTGAACATACCTAGTGGGAATTTTTCAGGCAGTGGTTAAAGATGATAACTTGACAGAAGATGAAGTCACATTTAAACTGAAGTGGGATTTGGCAAACTAGCCATAGAAAAGTTGGAAAAATTGGAATAGCAATATAGAGGCTTTGTGGTTGCTTTGTACAGCAGAAGCCATGTATCAGTTTGTTGTCATTGATGCTAAGTGACAGGCATGTTGCTAGTGGTCTTAGAGCCTAGCTGCTGAATGTATGGAAAACTATTTGGTGGAGACTTGTTTTTTACAGTGTTGTCCAAAAAAGCCTTTGTAACATTTGAGGGCAGTCATTCCAGGCAAAGAATAGCAAATGCAGTTTGAAGTGGAATGTGCTGGACATGTTCGGGGGGATAAGGTAGCCAAGTGTGCTGGATACAAAGTGGCAAGAGAAGAACTAAGGTAGAAAAGGGAATGCATGGGAAAAGAAACCAGATTGTGCGGGAAAGCCACAGGACCATGAAATCATCTGCACTCAAGGATTGTGTCGTGGCTGCTGGGTAGTGGAGTAAAAGCAGAGAGCAAGGTTTTAGCAATATTTTCATGTGAGATGATACATATAGTTTAGGGTTATAGTTGTGAAAGTGATGGGAAATTAAGAACAGGATTTGCCCATGTGTTGATTGAGGGGGAAAAATCTGTTTTGTCCTGGGCATTGGGAAGAAAGGAATTAACATTGAGATGGCACGGGAAATCGAGAGTTCAGGTTTGGAGATAATATGAGATGTAGATTCAtttttttttcaattttctattgatttaaaagggagaggaagggggagaaacactgattggctacttactacacgtgccttgacttgggggttgaacacacagccttgggcatattgggacactggctctaaccaactgagctacctggccaggATCCCAGTTCCTGATGCAAATTAATAAGATAGGCAGACATTTGTCACGGGAGGAGAGTGGAGAGGTCTAAGCTAGAGACTCATAACAGAAATCTCAATATGTGACTTGTTAAAAATCACttttttttattgatttttagggagagagagtgagaaagaaaaacattggattcttgttctacttatttaattcattggttgatccctgtggatccatcttggcacatcaggcttattctaaccaaatgagctacctgactgggTCTCAATATATGACTTGAAGCCAGAACACTGAGATTATTCAAGCCCTCCAATTTAAAGATGATTAGCATGGAgaactggcagaggcgatgaaaaagaaaatgcccctgaggtagaaaaaccaagggagtggcctcgtggaagtctagtggacaagtgtttcaggaaggaggaaacagtcaaggttacctgttatgaactggtcaggtaagatgGTAAACTTTAGAAATATTTAATAGGAAAGAAAGCCTGATTAAAACAGGCTTAAGGGAgccctgactggtatggctcagctggttgaggatcatcctgtaaagcaaaaggtcactggttcaattcctggaaagggcacatatttgggttgtggggctggttcccagttgggacacttgtgagagacaaccaattgatgtttctctcacacatcaatgtatttctccctgtcttccctccctatccctctctctaaaaataaataaaatctgccctggctggcccagctcagtggattgagcgcgggctgtgaaccaaagtgtcgcaggttcaattcccagtcaggccacatacctgggttacaggccttgacccccagcaaccgcacatcattgatgtctctccctccctccctccctccctccctctctctctctctctctctctctctctctccctcccttccctctctaaaaataaaataaaatcttaaaaataaataaaatctaaaaaaaaaaaaTAGGCTGAAGAGAACAGCAAATTCACATGCAGCATATTGCCCAGAAAATATCATAACACAGTATTTTTTAAAAATACTTCCactgattttttttaagagagggaaacattgatgtgttaccacacttatttatgcattcattggttgattcttatatgttccctgactgacaattgaacctgcaaccttggagtattgcaacgatgctctaatcaattgacctacccagccaaggcCAAGTATTTTTTattatgtgtgcatctgcttacacagtaggtgtgtgaatgactcatttgaatcacattttccttaggctctgtttaaatcactagtaaatgtgtttgtaagttccatcatctgacttacagggttaataactataaacaaaactgctaatgatgacaataatggcagaattgcaaaaacaacaaaaaccccaaccaacttgaaaaaaccctgaGCATCTGTGTGCATGTGCATGGAGATGAATGACCTTGGCTGGCAGAATACTCAGTAAAATGGAATGTAAACCAGGATTACTAAAGATTACATCTCAGTGACCACTACCTCACACTTAGTAGGTCATGGTTATTCAACTGTTAATTATATGTAGAAGAATGGCTAACAGCCCCCTGGTGGGTTACAAACCTTTTTCTGGGGAaaacaaaacaaacaaacacaaacaaaAACCCTTCAGCTTTGTGGCAATTGACAAAATTTCCCAGAGACTGCCCAGAAGAACTGAGAGCCCAACTTGATGTTTTTGGATATATTTATGATCTTCTGGACCTACTTATGGACCATACTTGAAAATCACTGGAAccctgactggtgtggcttagtgggctgggtgttatcccacaaagccaaagatttccagtttgattcctgcagggcacatgccagggttgtgggccaggtccctagttgggggtgtgcaagaggcaacccatcaatgtttctcttgcacatcaatatccctctctttcttcctcccttcccccactctaaaaataaataaaATCTTTAAAAAAAAATTGCTGGAGTGAAAAACAGTTTGATGCTGAATAAAAAAGTTGAGCTACTT
>TPT1_x7
ATGATCATCTACCGGGACCTCATCAGTCATGATGAGATGTTCTCCGATATCTACAAGATCCGCGAGGTCGCAGACGGGCTGTGTTTGGAGGTAGAGGGAAAGATGGTCAGTAGGACAGAGGGTAACATCGATGACTCGCTTATTGGTGGAAACGCCTCTGCTGAAGGCCCGGAGGGCGAAGGAACGGAAAGCACTGTAATCACTGGTGTTGATATTGTTATGAACCATCATTTGCAGGAAACCAGCTTCACGAAAGAGGCTTACAAGAAGTACATCAAAGATTACATGAAATCAATCAAAGGGAAACTCGAAGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGGGCTGCAGAACAAATCAAGCACATCCTCGCTAATTTCAAAAACTACCAGTTCTTTATTGGTGAAAACATGAATCCAGATGGCATGGTTGCTCTGCTGGACTACCGTGAGGACGGTGTGACCCCATATATGATTTTCTTTAAGGATGGTTTAGAAATGGAAAAATGTTAA