Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name BCAS2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name BCAS2 pre-mRNA processing factor
Also known as DAM1|SPF27|Snt309
Coordinate chr1:114567557-114581615
Strand -
Gene summary Involved in mRNA splicing, via spliceosome. Located in centrosome and nuclear speck. Part of U2-type catalytic step 2 spliceosome. Colocalizes with DNA replication factor A complex. Implicated in breast cancer. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from BCAS2

Retroname Coord Strand Genomic Region ENSG
BCAS2P2 chr1:100392464-100393655 - Intragenic
ENSG00000234332 UCSC
BCAS2P1 chr11:83132026-83134865 + Intergenic
ENSG00000255051 UCSC
BCAS2P3 chr13:79166312-79167272 + Intergenic
ENSG00000226670 UCSC
BCAS2P4 chr3:122778836-122779493 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_005872.3
GCAGGCAAACCTGAGGTCCTCAGAATGGCGGGCACAGGTTTGGTGGCTGGAGAGGTTGTGGTGGATGCGCTGCCGTATTTTGATCAAGGTTATGAAGCCCCTGGTGTGCGGGAAGCGGCTGCAGCGCTGGTGGAGGAGGAAACTCGCAGATACCGACCTACTAAGAACTACCTGAGCTACCTGACAGCCCCGGATTATTCTGCCTTTGAAACTGACATAATGAGAAATGAATTTGAAAGACTGGCTGCTCGACAACCAATTGAATTGCTCAGTATGAAACGATATGAGCTTCCAGCCCCCTCCTCTGGTCAAAAAAATGACATTACTGCATGGCAAGAATGTGTAAACAATTCTATGGCCCAGTTAGAGCATCAAGCAGTTAGAATTGAGAATCTGGAACTAATGTCACAGCATGGATGTAATGCCTGGAAAGTATACAATGAAAATCTAGTTCATATGATTGAACACGCACAGAAGGAACTTCAGAAGTTAAGAAAACATATTCAAGATTTAAACTGGCAGAGAAAGAACATGCAACTCACAGCTGGATCTAAATTGAGAGAAATGGAGTCAAATTGGGTATCCCTGGTCAGTAAGAATTATGAGATTGAACGGACTATTGTTCAGCTAGAAAATGAAATCTATCAAATTAAGCAGCAACATGGAGAGGCAAACAAAGAAAACATCCGGCAAGACTTCTGAAAAGACAATTTAGCAGGTAGAAGAAAAGTTGGGCTTTCACAAAAGGCATCTGAACTTTTAATGAACTTTGAAGGACAACAGCATCTTCCCAAAACCATTGATGTTTAAGTGTTTAGAAATCATAGAAGGTGTAGGCTGCTGTGGTAATTCTATTTGTATATCTCAACAGAATTAAAATGTCTAGCTTGGTGGTATTTTTATAGCCATAAAAGAAAATCTTTAGGCTTTCAAAATAAGGATGACTTTAGAATAATATTGTGTCATAGAATTAATTTTCAGCCATGTGGACCATATTTTGTATCCAAGGATCCTTATTTAAAGCTTTCAACATGTACAGGAAGTTGGAAATTTTTGGTTTATGACTTTGTCTAATAAAGAGATAGTTCTAAACACATTCTTGATCACCAAACAACTTCAGAAAGACAGTGACTGTACAGTTatcattatcatcatcatcgtcatcatcataggtaacagttatatcaagcttaatatgtgctgaacattgttctgaacactttaggtagatgaactagatgtatgtgaataaaaattatttggtcctcacaaaaa