Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name CSDE1
Plot displaying the genomic locations of a parental gene (in scaffold_m29_p_21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rhinolophus ferrumequinum
Full Name N/A
Also known as NULL
Coordinate scaffold_m29_p_21:43245068-43280271
Strand -
Gene summary N/A

Retrocopy(s) from CSDE1

Retroname Coord Strand Genomic Region ENSG
CSDE1P2 scaffold_m29_p_1:23492471-23495390 + Intergenic
 N/A UCSC
CSDE1P4 scaffold_m29_p_1:84185742-84188954 + Intergenic
 N/A UCSC
CSDE1P1 scaffold_m29_p_1:103082367-103083615 + Intergenic
 N/A UCSC
CSDE1P3 scaffold_m29_p_1:71761625-71763789 + Intergenic
 N/A UCSC
CSDE1P7 scaffold_m29_p_22:28879164-28881934 - Intergenic
 N/A UCSC
CSDE1P5 scaffold_m29_p_2:14609124-14609458 + Intergenic
 N/A UCSC
CSDE1P6 scaffold_m29_p_16:21656835-21657869 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>CSDE1_x1
AACTCTCGCGAGAGAAGCGAGATTTATTCCTACGTACCGGGCCGTGCTGCTTATGGCGGCGCTGGAGAGGGGGCGCTGAGCTGTTGGGTATGAAGTGTAACAGAACAGACTTTACCACCTGAAACTGCTGCTTCAAGTTCAGATCAGGCAAGGAACAAACCTCGAAACAACTAACAAGACCAAAGAAGAGTACACTTAAGTTGAAGACACAACACTTGATCTGAAACAAGAAGTTTGTGCCTACTCAACAGCTTTGAAAGAGCACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTGTGCTGTGAGATTGCCCGGTGCAGCAGCAGTTGTATTCTTTATTAGCTTGGTAGATCATTTTCTCTCGCTCTTTTTTTTAATACTAGCAACTTTCATCCTTTGAAACGTGTGCTGAAAAAGAAGAATCAGCAAATACTACTGAAAGTGCAATATTTGATTATCACTGCGAGATGAGCTTTGATCCAAACCTCCTCCACAACAATGGACACAATGGGTACCCCAATGGTACTTCAGCAGCACTGCGTGAAACGGGGGTTATTGAAAAACTGCTAACCTCTTATGGATTTATTCAGTGTTCAGAACGTCAAGCTAGACTTTTCTTCCACTGTTCACAGTATAATGGCAACCTGCAGGACTTAAAAGTAGGAGATGATGTTGAATTCGAAGTATCGTCTGACCGGCGGACTGGGAAACCCATTGCTGTTAAACTGGTGAAGATAAAACCAGAAATCCCTGAAGAACGAATGAATGGACAAGAAGTGTTTTATCTGACTTATACCCCTGAAGATGTGGAAGGGAATGTTCAGCTGGAAACCGGAGATAAAATAAACTTTGTAATTGATAACAATAAACATACTGGTGCTGTAAGTGCTCGAAACATTATGCTGTTGAAAAAGAAACAAGCCCGCTGTCAGGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATTGAAAGAGGTGATATTGTAAAAGAGATATTCTTTCACTATAGTGAATTTAAGGGCGACTTAGAAACCTTACAGCCTGGAGATGATGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAAGTTGCAACAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAAGGAACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGCATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGGAGACAAAGATACAAAATCCAAGGTGACCCTATTGGAAGGCGACCATGTTAGATTTAATATTTCAACGGACCGACGCGACAAATTAGAACGAGCAACCAACATAGAAGTTCTATCAAATACATTTCAGTTCACTAATGAAGCCAGAGAAATGGGTGTAATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAGTGTGTGGACCGTGATGCTCGCATGTTCTTCCACTACAGTGAAGTTCTGGATGGGAACCAGCTCCATATTGCAGACGAAGTCGAGTTTACTGTGGTTCCTGATATGCTCTCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAGCTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCGTTTTCTGGGCACTGTAGAAAAAGAAGCCACTTTTTCCAATCCTAAAACCACTAGCCCAAATAAAGGCAAAGAAAAGGAGGCTGAAGATGGTGTAATTGCTTATGATGATTGTGGGGTGAAATTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAAGCCTGGACAGCAGATTGCAACTTGTGTGCGGCTTTTAGGTCGTAATTCTAACTCCAAGAGGCTCTTGGGTTACGTGGCAACTCTGAAGGATAATTTTGGATTCATTGAAACAGCCAATCATGATAAGGAAATCTTTTTCCATTACAGTGAGTTCTCTGGTGACGTCGATAGCCTGGAACTGGGGGACGTGGTCGAGTACAGCTTGTCCAAAGGCAAAGGAAACAAAGTCAGCGCAGAAAAAGTCAACAAAACGCACTCGGTGAATGGCATTACTGAGGAAGCAGATCCTACCATCTACTCGGGGAAAGTCATTCGCCCTTTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATCGTGGAGGAAGGGGACATGAAAGGTGAGGTCTATCCATTTGGCATAGTTGGAATGGCCAACAAAGGGGATTGCCTGCAGAAAGGGGAGAGCGTCAAGTTCCAGTTGTGTGTCCTGGGCCAAAATGCACAGACTATGGCCTACAACATCACACCCCTGCGGAGGGCCACAGTGGAGTGTGTGAAGGATCAGTTTGGCTTCATTAACTATGAAGTAGGAGACAGCAAGAAGCTCTTTTTCCATGTGAAAGAAGTTCAGGATGGCATTGAGCTACAGGCTGGAGATGAGGTGGAATTCTCAGTGATTCTTAATCAGCGCACTGGCAAGTGCAGTGCTTGTAATGTTTGGCGAGTCTGCGAGGGTCCCAAGGCTGTTGCGGCTCCACGACCTGATAGGTTGGTCAATCGCTTGAAAAACATCTCCCTGGATGATGCCAGTGCTCCTCGCCTAATGGTTCTTCGTCAGCCAAGGGGACCAGATAACTCGATGGGATTTGGTGCAGAAAGAAAGATCCGTCAGGCCGGTGTCATTGACTAACCACATCCACAAAGCACATCATTAATCCACTATGATCAAGTTGGGGGGATTCTGGTGAAGGGTTCTGAATATCTCCCTCTTCATCCCTCCCAAAATCTGGAATACTTATTCTATTGAGCTATTACACCAGTTTTAACACCTTCCTCGTGTTATGTTT
>CSDE1_x2
TCCTACGTACCGGGCCGTGCTGCTTATGGCGGCGCTGGAGAGGGGGCGCTGAGCTGTTGGGTATGAAGTGTAACAGAACAGACTTTACCACCTGAAACTGCTGCTTCAAGTTCAGATCAGGCAAGGAACAAACCTCGAAACAACTAACAAGACCAAAGAAGAGTACACTTAAGTTGAAGACACAACACTTGATCTGAAACAAGAAGTTTGTGCCTACTCAACAGCTTTGAAAGAGCACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTGTGCTGTGAGATTGCCCGGTGCAGCAGCAGTTGTATTCTTTATTAGCTTGGTAGATCATTTTCTCTCGCTCTTTTTTTTAATACTAGCAACTTTCATCCTTTGAAACGTGTGCTGAAAAAGAAGAATCAGCAAATACTACTGAAAGTGCAATATTTGATTATCACTGCGAGATGAGCTTTGATCCAAACCTCCTCCACAACAATGGACACAATGGGTACCCCAATGGTACTTCAGCAGCACTGCGTGAAACGGGGGTTATTGAAAAACTGCTAACCTCTTATGGATTTATTCAGTGTTCAGAACGTCAAGCTAGACTTTTCTTCCACTGTTCACAGTATAATGGCAACCTGCAGGACTTAAAAGTAGGAGATGATGTTGAATTCGAAGTATCGTCTGACCGGCGGACTGGGAAACCCATTGCTGTTAAACTGGTGAAGATAAAACCAGAAATCCCTGAAGAACGAATGAATGGACAAGTTGTGTGCGCTGTTCCTCACAACTTAGAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATGGGGAAGTGTTTTATCTGACTTATACCCCTGAAGATGTGGAAGGGAATGTTCAGCTGGAAACCGGAGATAAAATAAACTTTGTAATTGATAACAATAAACATACTGGTGCTGTAAGTGCTCGAAACATTATGCTGTTGAAAAAGAAACAAGCCCGCTGTCAGGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATTGAAAGAGGTGATATTGTAAAAGAGATATTCTTTCACTATAGTGAATTTAAGGGCGACTTAGAAACCTTACAGCCTGGAGATGATGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAAGTTGCAACAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAAGGAACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGCATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGGAGACAAAGATACAAAATCCAAGGTGACCCTATTGGAAGGCGACCATGTTAGATTTAATATTTCAACGGACCGACGCGACAAATTAGAACGAGCAACCAACATAGAAGTTCTATCAAATACATTTCAGTTCACTAATGAAGCCAGAGAAATGGGTGTAATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAGTGTGTGGACCGTGATGCTCGCATGTTCTTCCACTACAGTGAAGTTCTGGATGGGAACCAGCTCCATATTGCAGACGAAGTCGAGTTTACTGTGGTTCCTGATATGCTCTCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAGCTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCGTTTTCTGGGCACTGTAGAAAAAGAAGCCACTTTTTCCAATCCTAAAACCACTAGCCCAAATAAAGGCAAAGAAAAGGAGGCTGAAGATGGTGTAATTGCTTATGATGATTGTGGGGTGAAATTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAAGCCTGGACAGCAGATTGCAACTTGTGTGCGGCTTTTAGGTCGTAATTCTAACTCCAAGAGGCTCTTGGGTTACGTGGCAACTCTGAAGGATAATTTTGGATTCATTGAAACAGCCAATCATGATAAGGAAATCTTTTTCCATTACAGTGAGTTCTCTGGTGACGTCGATAGCCTGGAACTGGGGGACGTGGTCGAGTACAGCTTGTCCAAAGGCAAAGGAAACAAAGTCAGCGCAGAAAAAGTCAACAAAACGCACTCGGTGAATGGCATTACTGAGGAAGCAGATCCTACCATCTACTCGGGGAAAGTCATTCGCCCTTTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATCGTGGAGGAAGGGGACATGAAAGGTGAGGTCTATCCATTTGGCATAGTTGGAATGGCCAACAAAGGGGATTGCCTGCAGAAAGGGGAGAGCGTCAAGTTCCAGTTGTGTGTCCTGGGCCAAAATGCACAGACTATGGCCTACAACATCACACCCCTGCGGAGGGCCACAGTGGAGTGTGTGAAGGATCAGTTTGGCTTCATTAACTATGAAGTAGGAGACAGCAAGAAGCTCTTTTTCCATGTGAAAGAAGTTCAGGATGGCATTGAGCTACAGGCTGGAGATGAGGTGGAATTCTCAGTGATTCTTAATCAGCGCACTGGCAAGTGCAGTGCTTGTAATGTTTGGCGAGTCTGCGAGGGTCCCAAGGCTGTTGCGGCTCCACGACCTGATAGGTTGGTCAATCGCTTGAAAAACATCTCCCTGGATGATGCCAGTGCTCCTCGCCTAATGGTTCTTCGTCAGCCAAGGGGACCAGATAACTCGATGGGATTTGGTGCAGAAAGAAAGATCCGTCAGGCCGGTGTCATTGACTAACCACATCCACAAAGCACATCATTAATCCACTATGATCAAGTTGGGGGGATTCTGGTGAAGGGTTCTGAATATCTCCCTCTTCATCCCTCCCAAAATCTGGAATACTTATTCTATTGAGCTATTACACCAGTTTTAACACCTTCCTCGTGTTATGTTTAAAAAAGAAATAAATAAATTTAAGAAAACCATTTT
>CSDE1_x4
GAAGTCGAGTTTACTGTGGTTCCTGATATGCTCTCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAGCTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCGTTTTCTGGGCACTGTAGAAAAAGAAGCCACTTTTTCCAATCCTAAAACCACTAGCCCAAATAAAGGCAAAGAAAAGGAGGCTGAAGATGGTGTAATTGCTTATGATGATTGTGGGGTGAAATTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAAGCCTGGACAGCAGATTGCAACTTGTGTGCGGCTTTTAGGTCGTAATTCTAACTCCAAGAGGCTCTTGGGTTACGTGGCAACTCTGAAGGATAATTTTGGATTCATTGAAACAGCCAATCATGATAAGGAAATCTTTTTCCATTACAGTGAGTTCTCTGGTGACGTCGATAGCCTGGAACTGGGGGACGTGGTCGAGTACAGCTTGTCCAAAGGCAAAGGAAACAAAGTCAGCGCAGAAAAAGTCAACAAAACGCACTCGGGTAATGAGTTGTGACTTCTCCTTGCTCAGTCTGTGCTGGGGGAGGAGGGACAAAATGGGAGGGGGGCGAAAATCCAATTGTTCTCATcagtggttctccaggtgtgatccccagatcccgcagtgtcacctggccacttgttagaaatacagcttctctgaccccaccccagacctgctgaaactcggggggtgggcatttctaatacatccttcaggtaattctgatgtgcacttaagttggagaaccactgGTTTAGGTATTTTAGGTTATTTAAGTTTCTTTTCAATTCAGTTCTCTTTAAAAAAAAATAACCCCAAGATAATAAATTTCCGTGGGGCTGGAGAGAGAGGCATTACTCTAGAACATTATTTTGGAGGAGAATGAGTCCAAATGTGAAAAGTAATGGGAACTTAAGAAAATTGTTGCTATTTAGTATCTCCAACATTAAAAAACCAGCAACTTATGTTTTTGGCTTTCATCTAAACTCCCCAAATAACACATTCTCTTCGCGAGACCTAGAGAAATGACAGCCAAGAATGTTCATTTTAATTCAGTAAATATCTTAAGTACATGCTAtgttttgggtattgggagtacagcagtaaaaaaattagacaaacccctgcgttcttgagtttttaagtggaaaatacaggcaaacaagatgagtgaaatgttatatgtagtaagtatgcttagaaaaattactattaagataaaataaatcagaaaagtatgtaagtgttggggttgccattttagaggccaggtaaagcctcactaaaaaggtgaaatttcgtcacctggaaaaggtgagagaacaagacatgTTTTAAGTGTGAGTACTTGTTAATTCCTTAAACAAATGAACTTTATTTTAATGGTACTTGAGAAATATTTCAAGAATAGCAGACAACCAACCAATCTCCTGTTAATATTTGTTTTGACGAATTTGGCTTTTGTTTTTGTGGGACAGAGTTTAAATAAAATTGTTGAGTGAGAGGTATACACACTTTTGTTTTGTAGTGAATGGCATTACTGAGGAAGCAGATCCTACCATCTACTCGGGGAAAGTCATTCGCCCTTTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATCGTGGAGGAAGGGGACATGAAAGGTGAGGTCTATCCATTTGGCATAGTTGGAATGGCCAACAAAGGGGATTGCCTGCAGAAAGGGGAGAGCGTCAAGTTCCAGTTGTGTGTCCTGGGCCAAAATGCACAGACTATGGCCTACAACATCACACCCCTGCGGAGGGCCACAGTGGAGTGTGTGAAGGATCAGTTTGGCTTCATTAACTATGAAGTAGGAGACAGCAAGAAGCTCTTTTTCCATGTGAAAGAAGTTCAGGATGGCATTGAGCTACAGGCTGGAGATGAGGTGGAATTCTCAGTGATTCTTAATCAGCGCACTGGCAAGTGCAGTGCTTGTAATGTTTGGCGAGTCTGCGAGGGTCCCAAGGCTGTTGCGGCTCCACGACCTGATAGGTTGGTCAATCGCTTGAAAAACATCTCCCTGGATGATGCCAGTGCTCCTCGCCTAATGGTTCTTCGTCAGCCAAGGGGACCAGATAACTCGATGGGATTTGGTGCAGAAAGAAAGATCCGTCAGGCCGGTGTCATTGACTAACCACATCCACAAAGCACATCATTAATCCACTATGATCAAGTTGGGGGGATTCTGGTGAAGGGTTCTGAATATCTCCCTCTTCATCCCTCCCAAAATCTGGAATACTTATTCTATTGAGCTATTACACCAGTTTTAACACCTTCCTCGTGTTATGTTTAAAAAAGAAATAAATAAATTTAAGAAAACCATTTTAAAATTATGCACAGTTGCAGCCTGGAAAACTTAAAGGTGGCGCCTTATAGTATCAATTTTAGGAGCTTTATTTGGTGCATTTAACGCAACTGGTAATTGCAAACTCCACTTGCCTGTGTAAGTGAAAAATATAGACTGTTAACTTGTTGGCCCTATGAAATTCTGCACTTGATATTTAGTATATACTCTACCTTCATTACTTTTGGCAAGATGTTCTGCCTTATCACTCAGTTGCATTCTCTTTCCTGTTCATTATGCTTTAATTCTAAGAACCATATGAGGGTAGAATATATTAAAAATTACAAAAATTTGTATAGGCATACCATTTCCTTAAGTTGATGGCCAAATGTTAAAATGTTATTTTTCATATCATTTATAATCTTGTCACAGTCCACTTAACAAAGTTTGGTTAGATTTCAATGAAAATGATCTTCCAGAGTAGTTTTTTTTTCCTGGGATGGGAGGGGGGTAAACTTGACTAAATTAGTATGTATGGTGCAGAATTTCATGCAAATGAGGTGTGCCAGCAGTGTGATAATTTAAACGTATTTAAACAAAAAACAAAAAGGACGGAATGCACAAACTTGCTGCTGCTTAGATCACTGCAGCTTCTAGGACCCAGTTTCTTTTACTGATTTaaaaacaaaacaaaaaaaaataaaaaaGTTGTGCCTG