Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snrpd2
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small nuclear ribonucleoprotein D2
Also known as 1810009A06Rik|SMD2
Coordinate chr7:18883370-18886659
Strand +
Gene summary Predicted to enable U1 snRNP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to act upstream of or within mRNA processing. Predicted to be located in cytosol and nucleus. Predicted to be part of several cellular components, including methylosome; spliceosomal complex; and spliceosomal snRNP complex. Is expressed in embryo. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human SNRPD2 (small nuclear ribonucleoprotein D2 polypeptide). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpd2

Retroname Coord Strand Genomic Region ENSG
Snrpd2P3 chr10:127847610-127848076 + Intergenic
 ENSMUSG00000112909 UCSC
Snrpd2P4 chr13:53679706-53680168 + Intergenic
 ENSMUSG00000063166 UCSC
Snrpd2P2 chr9:13638388-13638765 - Intergenic
 ENSMUSG00000111698 UCSC
Snrpd2P1 chr3:68216084-68216546 - Intergenic
 N/A UCSC
Snrpd2P5 chr15:57984947-57985392 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_026943.1
AAGGCTGGAGCAACGCGCTTGGAGGCGGGAGTGATCTGCGAGCGAAACCTACACCATGAGTCTCCTCAATAAACCCAAGAGTGAGATGACCCCAGAGGAGCTGCAGAAGCGGGAGGAGGAGGAATTCAACACAGGTCCCCTCTCAGTGCTCACGCAGTCGGTCAAGAACAACACGCAAGTGCTCATTAACTGTCGCAACAACAAGAAGCTGCTGGGCCGGGTGAAGGCCTTTGACAGGCACTgcaacatggtgctggaaaatgTGAAGGAGATGTGGACTGAGGTTCCCAAGAGCGGCAAGGGCAAGAAGAAATCCAAGCCTGTCAACAAGGACCGCTACATCTCCAAGATGTTCCTGCGCGGGGACTCGGTCATCGTGGTGCTGCGGAACCCACTCATCGCTGGCAAGTAGagcctgctccctgccctgcgaAGGCCTGCAGAACCCTGCCCAGTGGGCGAGAAATAAAACCCTGTGCTTTTTGGTT