Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Shmt2
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name serine hydroxymethyltransferase 2 (mitochondrial)
Also known as 2700043D08Rik|SHMT
Coordinate chr10:127352992-127358313
Strand -
Gene summary Enables glycine hydroxymethyltransferase activity. Involved in regulation of mitochondrial translation; regulation of oxidative phosphorylation; and tetrahydrofolate interconversion. Located in nucleus. Is expressed in several structures, including brain; neural retina; placenta; skeleton; and submandibular gland primordium. Orthologous to human SHMT2 (serine hydroxymethyltransferase 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Shmt2

Retroname Coord Strand Genomic Region ENSG
Shmt2P1 chr7:80078890-80080120 + Intergenic
ENSMUSG00000081664 UCSC

Expression

Transcript Sequences

>NM_001252316.1
CTCTTTCACTCGAACTTCACGGGGGCAATTTTCTCGCGCACGCGTTCTAAGAGCAGCTGGTTTTCGACCCCGGTACTACACCGATACAGAGTTAGTGGCTAGTCCTCCTGTGCCTCCTGTAGCGATGGTATCCTTCTCTTTGCTTCGGACCACTCGGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGCAGGCTGGGGAAGCAGCTGGAGGTTGGACGGGCCAGGAGAGTTTATCAGACAGTGACCCTGAGATGTGGGAGCTTCTGCAGAGGGAGAAGGACAGACAGTGTCGCGGCCTGGAGCTCATCGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGGAGGCCCTGGggtcctgtctcaacaacaagtacTCGGAGGGTTACCCTGGCAAGAGATACTACGGAGGAGCGGAAGTGGTGGACGAGATCGAGCTGCTCTGCCAGCGCCGGGCCTTGGAAGCCTTTGACCTGGATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAATCTGGCTGCCTATACGGCCCTTCTGCAGCCTCATGATCGAATCATGGGGTTGGACCTGCCCGATGGGGGCCATCTCACCCATGGCTACATGTCTGATGTCAAGCGGATCTCCGCCACATCCATTTTCTTCGAGTCTATGCCCTATAAGCTCAATCCCCAAACTGGCCTCATCGACTACGACCAGCTGGCGCTGACCGCTCGGCTTTTCCGACCGCGGCTCATCATAGCTGGCACGAGTGCCTATGCCCGCCTCATTGACTATGCACGCATGAGAGAGGTCTGTGATGAGGTCAGGGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAGGTGATCCCCTCCCCTTTCAAGTACGCGGATGTTGTTACCACCACCACTCACAAGACACTGCGAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAGGGAGTACGAACCGTAGACCCCAAGACTGGCAAAGAGATCCCTTATACCTTTGAGGACCGAATCAACTTCGCTGTGTTCCCATCCCTACAGGGTGGCCCCCACAACCACGCCATTGCTGCAGTAGCCGTGGCTCTCAAGCAGGCCTGCACCCCTATGTTCCGCGAGTACTCCTTACAAGTGCTGAGGAACGCCCAGGCCATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCTGGTGTCTGGTGGCACTGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCCCGAGCCGAACGCGTGTTGGAACTCGTCTCCATCACAGCCAACAAGAACACCTGTCCTGGAGACCGGAGCGCCATTACTCCGGGGGGCTTGAGGCTTGGGGCCCCCGCGTTGACCTCTCGCCAGTTCCGTGAGGACGACTTCCGTAGAGTCGTCGATTTTATCGATGAGGGAGTCAACATTGGCTTGGAGGTGAAGCGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGCCTGGATTTGATGAACGTTGAGGACAGTTGAGGACACCTGGCGGTCGGTCAGAAGCCCACAGACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTtttagtggagggagggaggccttCCATTTAGGGCAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTTTAACCGTGTCTACACGAAGCACCCAGTTGACATCCGACTTGTTTTTGAGACGGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCttcatttcccaagtgctggggttataggtttGCACCATGACACCCGACTTCGCCCTCAGCTTTCCACCCCGACCCTCCCACTACATCTCAAGTGTTACAGACTCCCCTCCCGCTCTTTCTTGGGGAAGAGGGGGTGGGTAAGCGCCCTCCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTgtatctctccttccctcccaccaccaccaggaCCCCCGGGGCTGTAGCCTCCTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAATTGTATTTTGCCC