Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Taf9
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name TATA-box binding protein associated factor 9
Also known as 2310012M09Rik|TAFII31|TAFII32|Taf2g
Coordinate chr13:100787851-100792568
Strand +
Gene summary Enables DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in brain; genitourinary system; limb; tail; and thymus primordium. Orthologous to human TAF9 (TATA-box binding protein associated factor 9). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Taf9

Retroname Coord Strand Genomic Region ENSG
Taf9P1 chr3:102593295-102594193 - Intergenic
ENSMUSG00000104685 UCSC
Taf9P2 chr6:115614996-115616192 - Intragenic
Intragenic
ENSMUSG00000081805 UCSC

Expression

Transcript Sequences

>NM_027139.5
TTTCCGGTTCCTCCCTGGCAAGCGCGTCGGGGCGGGCGCGTGAGCGGAGGCTTTGGCTGCAGGGGAAGGAGGACTATGAAGCTTCCGAATATCCTGCTCACCGGTACACCAGGGGTTGGAAAAACCACACTAGGCAAAGAACTTGCATCAAGATCAGGCCTGAAGTACGTTAACGTGGGAGATCTAGCTCGAGAAGTCTGATCAGCGGATATCATGGAGTCTGGCAAGATGGCGTCTCCCAAGAGCATGCCGAAAGATGCACAGATGATGGCACAAATCCTGAAGGATATGGGGATTACAGAATATGAGCCAAGAGTTATAAATCAGATGCTGGAGTTTGCCTTCCGATATGTGACAACAATTCTAGATGATGCTAAAATTTATTCCAGCCATGCTAAGAAAGCTACTGTTGATGCAGATGACGTACGACTGGCAATCCAGTGCCGTGCTGACCAGTCTTTCACTTCTCCACCCCCGAGagatttcttattagatattgcACGACAAAGAAATCAAACCCCTTTGCCACTGATCAAGCCATATTCAGGTCCTAGATTGCCACCTGATAGGTATTGCTTAACTGCCCCAAACTATAGGCTTAAGTCTTTACAGAAAAAGGCACCTGCTCCTGCAGGAAGAATAACAGTTCCAAGGTTAAGTGTTGGTTCAGTTTCTAGTAGACCAAGTACTCCCACCCTAGGTACACCGACTCCACAAACCATGTCTGTTTCAACTAAAGTAGGCACCCCAATGTCCCTCACAGGACAGAGGTTTACAGTACAGATGCCTGCTTCTCAGTCCCCTGCTGTAAAAGCTTCTATACCTGCAACATCAACAGTTCAGAATGTTCTTATTAATCCATCGTTAATTGGGTCCAAAAACATTCTTATTACTACTAATATGGTATCACAGAATACAGCCGAGTCAGCAAATGCACTGAAACGGAAACGTGAagacgatgatgatgacgatgatgacgatgatgatgatgactatGATAATATGTAGTCTAGCCACGATGCATGTAACctgtgttcttggacttggaTCCATTGTACTACAAGTTAAAAAGCATGTTAGATGTTTTAAAGCTGTACTTTAGAAAGTGGTGTTTCATACGTATGCTTTGCTTTTTGATTAAAATGTTCAGTTTTACTAGAACTAGTGATGGTTTTTCATCAACCTTtatgcacaaaaaataaaattgtcatttATCAGTTTGA