Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Fam50a
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name family with sequence similarity 50, member A
Also known as D0HXS9928E|XAP-5
Coordinate chrX:73356589-73363761
Strand +
Gene summary Predicted to be involved in chromatin organization and regulation of RNA splicing. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in Armfield syndrome. Orthologous to human FAM50A (family with sequence similarity 50 member A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fam50a

Retroname Coord Strand Genomic Region ENSG
Fam50aP1 chr13:34930969-34931530 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_138607.3
ATCAGCTGACTAAATTGCCGCCGCCACTGCCGTCGCCGTCGCCTCCACGACTTCTCCAAGCAAAAGTCACTGTTGCCGCTGTCGTCGCTGCCAAcgccgccgctgccgctgccgctgccgctgccgctgccgctgcctcCGCTGAAACCGCCACTGCCTTCGCTGAAACCGCTGCTGCCACCATGGCCCAGTACAAGGGCGCTGCAAGCGAGGCGGGACGCGCCATGCACCTaatgaagaagagggagaagcagCGTGAGCAAATGGAGCAGATGAAGCAGAGGATTGCAGAGGAGAACATAATGAAATCTAACATTGACAAGAAATTCTCTGCACACTATGATGCTGTGGAAGCAGAGCTCAAGTCCAGTACTGTGGGTCTTGTGACTCTGAATGACATGAAGGCCAAACAGGAGGCACTGGTGAAGGAGCGAGAGAAACAGCTGGCAAAAAAGGAGCAGTCAAAGGAGCTACAGCTGAAACTAGAGAAGCTTCGAGAGAAGGAGCGCAAGAAGGAGGCCAAGCGGAAGATCTCCAGCCTGTCCTTCAccttggaggaagaggaggagggagttgaagaggaggaagagatggctaTGTAcgaggaggaactggagagggaaGAGATcaccacaaagaaaaagaaattggggaagaaCCCTGATGTGGACACAAGCTTCTTGCCTGACCGGGACCGGGAGGAGGAGGAGAATCGGCTTCGGGAAGAGCTGCGCCAGGAGTGGGAAGCCAAGCAGGAAAAAATCAAGAGTGAAGAGATTGAAATCACCTTTAGTTACTGGGATGGCTCTGGGCACCGGCGCACAGTTAAGATGAAGAAAGGCAACACGATGCAGCAGTTCCTACAGAAAGCACTAGAGATCTTGCGGAAAGACTTCAGTGAACTCAGGTCAGCAGGGGTGGAACAGCTCATGTACATCAAGGAGGATTTAATCATCCCCCATCATCACAGCTTCTATGACTTCATCGTTACCAAGGCACGAGGAAAAAGTGGGCCACTCTTCAACTTCGACGTTCATGATGATGTACGACTGCTCAGTGATGCCACTGTGGAGAAGGATGAGTCACATGCAGGCAAAGTAGTGCTAAGGAGCTGGTATGAGAAGAACAAGCACATTTTTCCTGCCAGTCGCTGGGAGCCCTATGACCCAGAAAAGAAATGGGACAAGTACACGATCCGGTGAGCATCCAAAAGTGGACATGACCTTGGCTCTCCCCAGCGTGCCTCCATGTCTCCAGGGCTCAGGTGACCATGCCAGAGCCCTCTGTGAGGATGGTAGTTGCTATTCCTTGACCTGATGTTATCATTACTGATTTTCCCTTTTACAATAAAAAAGTCCACATGTTGGAGCTGGAGTGCCTGCA