Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rap1a
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name RAS-related protein 1a
Also known as G-22K|Krev-1|Rap1
Coordinate chr3:105634576-105708697
Strand -
Gene summary Enables GTPase activity and small GTPase binding activity. Involved in positive regulation of vasculogenesis. Acts upstream of or within several processes, including negative regulation of synaptic vesicle exocytosis; positive regulation of ERK1 and ERK2 cascade; and positive regulation of neuron projection development. Located in several cellular components, including cell junction; neuron projection; and plasma membrane. Part of guanyl-nucleotide exchange factor complex. Is expressed in brain; early conceptus; hemolymphoid system gland; and oocyte. Orthologous to human RAP1A (RAP1A, member of RAS oncogene family). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rap1a

Retroname Coord Strand Genomic Region ENSG
Rap1aP1 chr2:117071350-117072432 + Intergenic
ENSMUSG00000081842 UCSC
Rap1aP2 chr7:46469591-46470924 - Intragenic
ENSMUSG00000087298 UCSC

Expression

Transcript Sequences

>NM_145541.5
GTGCTGCGTGCGTGCGCGTTCCGgaggcgccgccgccgccgctcccGAGGCCGCTGCTCCTGCCGCCGCCGTGCAGAGCCCGAGCCCGAGCCGCGGccgagaggagggaggaggaggaggtggaggaggcgcCGGGCCGCGGGATTGTCAATATTTAAACAGAGCGCATCATGCGTGAGTACAAGCTAGTAGTCCTTGGTTCAGGAGGCGTGGGGAAGTCTGCTCTGACAGTTCAGTTTGTTCAGGGGATTTTTGTTGAAAAATATGACCCAACGATAGAAGATTCCTACAGAAAGCAAGTCGAGGTAGATTGCCAACAGTGCATGCTGGAGATCCTGGACACTGCAGGAACCgaGCAATTTACAGCAATGAGGGATTTGTATATGAAGAATGGCCAAGGGTTTGCACTAGTTTATTCAATTACAGCTCAGTCTACGTTTAATGATTTACAAGACTTGAGAGAACAGATTTTACGGGTTAAAGACACAGAAGATGTTCCAATGATTTTGGTTGGCAATAAATGTGACTTGGAAGATGAACGGGTAGTTGGCAAAGAACAAGGCCAGAATTTAGCAAGACAGTGGTGTAACTGTGCCTTTTTAGAATCTTCTGCAAAGTCAAAGATCAACGTTAATGAGATATTTTATGACCTGGtcagacagataaatagaaaaACACCAGTGGAAAAGAAGAAGCCTAAAAAGAAATCATGTTTGCTGCTCTAGACCTGAAGTCAGCAGCAGCTCTGAGCCAGATTACAGAAATGAAGAACTGTTGCCTAATTGGAAAGTGCCAGCATTCCAGACTTCAAAAACGAAATCTGAAGAGGCTTCTCCTGTTTTATATATTATGTGAAGAATTTAGATCTTATATTGGTTTGCACAAGTTCCCTGGAGACAAAGTTGCTCTGTGTATATCTCTTGGAAATAAGACATAGTATTTCTCCTTTGCAATAGCAGTTATAACAGATGTGAAATAAGATACTTGACTCTAATACAATTATACAGAAGAGCATggatgcatttcaaatgttagatgTACTACTATAATCAAATGATTTCATATTGACGTTTTTATCATGACTCCTCCCTGTCAAGCACTAAAAAATTGAACCATCATACTTTATATCTGTAATGATATAGATTATGAAATCTCCTCTCAAACTCATTGCAGCAGATAACTTTTTTGAGTCATtgacttcattttatatttaaaattatgaaaatatcatCTGTCATTATATTCTAATTAAAATTGTTTGTGCATAATGCTTTGGAAAAATGGGTCTTTTATAGGGAAAAACTGGGATAACTGATTTCTATGGCTTTCAAAGctagaatatataatatactaaACCAACTCTAATATTGCTTCTTGTGTTTTACTGTCAGATTAAATTACAGCTTTTATGGATGATTAAATTTTAGTACATTTTCATTTGGTTTGtgtctttttgttattgtttattgACATAGTCCTTTATTTTATAATGACCACATTGTTTAGAGTGCAGCAGTAGCTCTTCCTTTCTGCCTGGATTCAGCAGAACACTTGGCTTTAAACTACCCTAACTGGTGATCTCTCTAGGAACAGACCTCGCACTCCTGCTCTAGATAGAGTTATTCCTACTATACAGTAAGATGCACCATGTGACATAGAATAGTTTTATATATACTCTCTTGACCTTAAAGATTGTATCATATTGAATAAAGTATCCCACtctgtattatttttatatgtaaaaagATAAGTTCAATACTGTATTACCAGGGTTTGACTTTGACTATCGCAAATCCTACATACACAGTTTGTAACTTCATCCAGGGAATCCTTGCCATTGTTAATTTGTTGGTGTGTGTCCACCAATGAAGTgttaaatgaaaattttcaaactTGCTCTCTAGTAGATGGAAGAACTTGAGGGAAGTGGTTGCAAGTCAGAACACAAAAAGGGACGTGTGACTTGACTGTATGagcagtgtagaggaatgctgtGAAGATGGATACAGCAGCTTGCTGGCTGTACAgaggtgcttttcttttccttcccagtTGCATTTTACAAAGGTGGGGCATATGTAGGACATGGAGCCAGGGCGATACTGCTGTATGTTCTCcatgaagaaagagaaagcaaatggCCTGTTGGCCAGGTGCATACAGGAGAAGAAAGCAGATTGCAAGCTTAGGAAACCCTGTGCCTTGTCCCTGAAAATCAAGGAGACCAGTCCTAGAAAGTAAATCTTTGCTCAGGGATCTAGATATGGTCTCATTGCAACTAGGTGTGAAGGTGTTCATGCCTTGCTGAGATATGCCAGGTGTGTGGACAGCCCTTTAGTTACCAAGTCAGCTTTCAAATGTAAGATCCAACCAACCTGAAGAAATGTCAAAAAGTACTGTTTGAAACATTGGAAATTGTATTCTTTTGATATTCTAATAAACTTAGCTACTTAACATTT