Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Nop2
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name NOP2 nucleolar protein
Also known as 120kDa|A530002O17|Nol1
Coordinate chr6:125108829-125121716
Strand +
Gene summary Predicted to enable rRNA (cytosine-C5-)-methyltransferase activity. Acts upstream of or within blastocyst formation. Predicted to be located in nucleus. Predicted to be active in nucleolus. Is expressed in several structures, including alimentary system; brain ventricular layer; branchial arch; early conceptus; and genitourinary system. Orthologous to human NOP2 (NOP2 nucleolar protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nop2

Retroname Coord Strand Genomic Region ENSG
Nop2P1 chr12:119574068-119575368 + Intergenic
 ENSMUSG00000113091 UCSC
Nop2P2 chr14:88228120-88228516 - Intergenic
 ENSMUSG00000115452 UCSC
Nop2P3 chrY:12841093-12842512 - Intergenic
 N/A UCSC
Nop2P4 chrY:17554328-17555747 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_138747.2
TTGCGCGATTCACTTTCGCGGTGTGCGACCTCTGAGTTCTTCCCCCCAGTGCACGTGGAGCGGGCCTTGACTGGAGGTGCCGGGTCAGCCGGAACCAGGTCTAGGCGAGCCGAGCCTTCAGTTATCATGGGGCGCAAGTTGGATCCTACGAAGAAGGAGAAGCGTGGACCCGGCCGAAAGGCCCGAAAACAGAAGGGTGCGGAGACCGAATTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAATTCCAAGAGGCTGTCGAGTCGTGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGTCTGTTGACGTCCCTAAGCCAAATAAGTCTCCTGGGATCAAAACATTGCCTGGAGAGTTATCCAAAGGAGCAGTCCAGGCTCGAGGTAAGAAGCGCCCAGCACCAATTCAAAACAGTGATGGGGACGAGGAGGAAGACTCGGGGGAAGACGATGTGGTGACCCAGGGGGACCTTTGGGGCTCTGAGGACAGTGATGAAGATATGGTGGATGACTATGGAGCTGCCTCTAACtcggaggatgaggaggaaaagCTGTTGCCTATTGAAAGAGCTGCCCTGAAGCAGAAAGCCCAGGATGCCACAGCTGGGGTCCTGTGGAATGAAGAGGACactgatgaagatgaagatgatgatggtgtGTCCCCTGAGTCCCACCCCAGAAAGGATGACAAAGCAGAGGGGGATTTGCAGATTAATGTGGAAGATGAGGAAGCCTTTGTGCTGCCCCCTGCTGGGGAGACGGACCAGGATGGCCAGGCTCCAGACCTGCAGCGAGTTCACAAGCGGATCCAGGACATCGTGGGAGTGCTGCGGGATTTCGGAGCTCAGCGAGAAGAGGGCCGGTCTCGAGCTGAGTATCTAAGTCGGCTTCAGAAGGACCTGGCCACTTACTATTCTTATGGAGACTTCCTGCTGAGCAAGCTCATGGAGCTGTTCCCTCTGTCTGAGTTGATCGAGTTCTTAGAAGCTAATGAGGTGCCCCGGCCAATCACCCTTCGGACCAACACCTTGAAAACCCGTCGCCGAGACCTTGCTCAGGCTCTGATCAATCGTGGGGTTAATCTGGATCCACTGGGGAAGTGGTCAAAGTCTGGACTTGTGGTATATGATTCTTCAGTGCCTATTGGCGCTACCCCTGAGTACCTCGCTGGACACTATATGCTGCAGGGAGCTTCCAGTATGTTGCCCGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGATCTTAGACATGTGCTGTGCTCCTGGGGGGAAGACCAGCTACATAGCTCAGCTGATGAAGAACACAGGAGTGATCCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGCTTGGGAGTCACCAACACCATCATCAGCCACTATGATGGGCGCCAGTTCCCCAAGGTGGTAGGGGGCTTTGATCGAGTGCTACTGGATGCTCCTTGTAGTGGCACAGGAGTCATCTCCAAAGACCCTGCTGTGAAGACGAACAAGGATGAGAAAGACATCCAGCGCTGTGCCCACCTTCAGAAGGAACTGCTGCTCAGTGCTATCGACTCAGTGAACGCTGCCTCCAAGACCGGAGGCTACCTGGTCTACTGCACCTGTTCCATTACGGTGGAAGAGAACGAGTGGGTGGTAGACTATGCCTTGAAGAAGAGGAATGTGCGGCTGGTGCCCACCGGCCTGGACTTCGGCCAGGAAGGTTTTACCCGCTTCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGGCGCTTCTACCCTCACACTCACAATATGGACGGTTTCTTTATCGCCAAGTTCAAGAAATTTTCCAATTCTATTCCCCAGCCCCATGCAGGAAACTCGGCAGCAGCTACCCCTACAGAGCCTGACCTGAAGGATCAGGTCACCCCAAAGTCTGAGAACGGTAGTCAGCCCACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATGCCCAAGTGTCTACCAGGCCCAGTCAGTCTGCTGGGAATGCTGACGTGAACAGCAAACGAAAGAGGTCTGAGAAGCTGAAGCAGCGGGGACCTAAGTGGAAGCCCTCTAAGGAGGCTGCTGTCCCAAAGCCGAGCGCCCCTTCCAGGGTTGAGGACTCGAGAACACCTCCTGTGCCGACTCCCTCTGAAATCCGTGCTGCCCCAAGGCCTAAGGACTGTGCTCCATCCCTTGGGgaagccaaaaagaaacagaaaggaaagcagcAGTTAGCACAGCAGCCTGCTAATGGAGCTGCTCCCCTGAAAGAAGATGCTGTTTCCAAGGGACCCTCAGCCCCCTTTGTGTCTCCCCACAGTTCCACCAGGCCCCCACCAGCAAAAAGGAGGAAATCAATGACAAAGGGCAACAGCCAGCCTCTGTTGTCTTAAATGGACTTGGAAACTTGACATTGTCTCTGGGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATATTACCACTCCTA