Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name SNRNP27
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name small nuclear ribonucleoprotein U4/U6.U5 subunit 27
Also known as 27K|RY1
Coordinate chr2:69893956-69905236
Strand +
Gene summary This gene encodes a serine/arginine-rich (SR) protein. SR proteins play important roles in pre-mRNA splicing by facilitating the recognition and selection of splice sites. The encoded protein associates with the 25S U4/U6.U5 tri-snRNP, a major component of the U2-type spiceosome. The expression of this gene may be altered in cells infected with the human T-cell lymphotropic virus type 1 (HTLV-1) retrovirus. A pseudogene of this gene is located on the long arm of chromosome 5. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Feb 2011]

Retrocopy(s) from SNRNP27

Retroname Coord Strand Genomic Region ENSG
SNRNP27P1 chr5:132986420-132988138 - Intergenic
 ENSG00000229738 UCSC

Expression

Transcript Sequences

>NM_006857.3
ACAGTTGTTTCCGGGAAGCGGGACTCCAAATGGGTCGCAGTCGCAGCCGCTCTCCACGGAGGGAACGTAGGCGTTCCCGGTCCACATCCCGGGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCGGGAGAGAGATCGGAGAAGGAGCCGCTCGCGATCCCCGCACCGAAGACGCTCCCGATCTCCAAGACGACATAGATCCACATCTCCTTCCCCTTCTCGACTgaaagaaagaagagatgaggaaaagaaagaaacaaaagaaacaaagagcaaagaaCGGCAGATTACTGAGGAAGACTTAGAGGGCAAAACAGAGGAAGAAATAGAAATGATGAAGTTAATGGGATTTGCCTCCTTTGACTCCACAAAAGGTAAGAAGGTGGATGGCTCTGTAAATGCCTATGCCATAAATGTCTCTCAGAAGAGGAAGTACAGGCAGTACATGAATCGAAAAGGTGGATTCAACAGACCTTTGGATTTCATTGCATGAGAATTGAAGTGTTGAAGGATGATTTTTTTTCCCCTCATCTTGGTCAGAGAGTGGATTTTGTATTTTGTATTTAACTTGCATTCAAAAAACAGGATCTCAGTTCTCCTTTCTTGTAAAGTAAGAAAATCTTATTTATGATATATGCAGTTAACTTACCTTGCCTCAACAGAAGAAAGGTTAAATATTACATTTTTTTCTTTTAGGAAATATCATTTGTGGCAGGCGTCAACCCCATTTTATTTGTCCTTATTCCTGTGGAAGCAGTATATGTTTTCTTCCTGAATGCTCATTAGGACTTCTTAAAAAACATGAAAGTAATTTGGAAGTAAGTTTATCCAATAAAGCAGTATTTCTACCCTTTTAGATTTGATAAATATTTTTATTACTAAAGAATCTCCCCAGACATTTTCTTTTTTTTTTCACACATAGATTTAAGTATCTTGATTGTTAGTAGTCTAAAAATGGGAAGAATGAAAAAGCATAACTAGATTTTTCTATCTTCTGTGGTCGCCCGCCCCCCCCCaaaaaaataccatttatggttctctccgcaagtataaaagcattacatgcaaaaaaaagatctcagagaaaacaaaagtaaaagaaaagcagaaaatcacctgttatctactcccagaaataatcaatttcaacattttggtatatgtttttccaggcttctttgggttgatcccacctatgagatcagaatatgtatgcagttctttctttaacccttttttctcctatgtactgtgaacatttaaaaagtacttttaaatattctttggaaacttagcttttagtaactacttggttgtatcataatttattaactaatgttttattggtaaacattggcttgcctcccatgacttgccattataattaaaactgtgactactatctgtctccattacataca