Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Fdps
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name farnesyl diphosphate synthetase
Also known as 6030492I17Rik|Fdpsl1|mKIAA1293
Coordinate chr3:89000895-89009274
Strand -
Gene summary Predicted to enable dimethylallyltranstransferase activity and geranyltranstransferase activity. Predicted to be involved in farnesyl diphosphate biosynthetic process; positive regulation of cell growth involved in cardiac muscle cell development; and positive regulation of cholesterol biosynthetic process. Predicted to act upstream of or within cholesterol biosynthetic process. Located in mitochondrion. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in porokeratosis. Orthologous to human FDPS (farnesyl diphosphate synthase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fdps

Retroname Coord Strand Genomic Region ENSG
FdpsP2 chr10:93614472-93615635 + Intergenic
ENSMUSG00000090610 UCSC
FdpsP3 chr12:71315463-71317178 - Intragenic
ENSMUSG00000113572 UCSC
FdpsP4 chr13:69004601-69005733 + Intragenic
ENSMUSG00000113859 UCSC
FdpsP5 chr17:17869072-17870199 + Intergenic
ENSMUSG00000116818 UCSC
FdpsP1 chr6:6735369-6736549 - Intergenic
ENSMUSG00000093651 UCSC
FdpsP6 chrX:59769940-59771129 - Intragenic
ENSMUSG00000084331 UCSC

Expression

Transcript Sequences

>NM_134469.4
GAGACTGGGAACTACAACTCCCAGAGTGCTGAGCGGATGCACGCTCAGCTTTTAGGTGTAAGCCGCAAACATCTTGGACCCCGGGAGAATCCGCGTTGAAGAACAGagcaTTTAGCTCCTCTGTCAGAATGAATGGGAACCAGAAATTGGATGCTTATAACCAAGAAAAGCAGAATTTCATCCAGCACTTCTCCCAGATCGTCAAGGTGCTGACTGAGAAGGAGCTGGGACACCCAGAGATAGGGGATGCTATTGCCCGGCTCAAGGAGGTCCTAGAGTACAATGCCTTAGGAGGCAAGTACAACCGGGGTTTGACCGTGGTACAAGCCTTCCAGGAGCTGGTGGAGCCGAAGAAACAGGATGCTGAGAGTCTTCAGCGGGCCCTGACAGTGGGCTGGTGTGTAGAACTGCTCCAGGCTTTCTTCCTTGTGTCAGATGACATCATGGACTCTTCCCTCACTCGCCGGGGACAGATCTGCTGGTATCAGAAGCCAGGCATAGGCTTGGATGCCATCAACGACGCTCTGCTTCTGGAAGCCTCCATCTATCGTTTGCTGAAGTTCTACTGCAGGGAGCAGCCCTACTACCTGAACCTGCTGGAGCTCTTTCTGCAGAGTTCCTATCAGACAGAGATCGGGCAGACTCTAGACCTCATGACAGCACCCCAGGGCCATGTGGATCTTGGTAGATACACTGAAAAGAGGTACAAATCGATTGTCAAGTACAAGACGGCTTTCTACTCTTTCTACCTGCCTATTGCGGCCGCCATGTACATGGCAGGCATTGATGGGGAGAAGGAACACGCCAATGCCCTGAAGATCCTGATGGAGATGGGCGAGTTCTTCCAGGTCCAGGACGACTACCTTGATCTCTTTGGAGACCCCAGTGTGACGGGAAAGGTCGGCACTGACATCCAGGACAACAAATGCAGCtggctggtggttcagtgtctgctACGAGCCTCTCCTCAACAGCGCCAGATCTTAGAGGAGAATTATGGGCAGAAGGACCCAGAAAAAGTGGCTCGGGTGAAAGCACTGTATGAGGCGCTGGATCTGCAGTCTGCTTTCTTCAAGTATGAGGAAGACAGTTACAACCGCCTCAAGAGTCTCATAGAGCAGTGCTCTGCGCCCCTGCCCCCATCCATCTTCATGGAACTTGCAAACAAGATCTACAAACGGAGAAAGTGACCCCGGAATTGGAgaggctgggagggagggggTCTCAATAAATTATTGTTCAACA