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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl10
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L10
Also known as D0HXS648|DXHXS648|DXHXS648E|QM|QM16
Coordinate chrX:73314422-73316741
Strand +
Gene summary Predicted to enable translation regulator activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including embryonic brain development; regulation of cellular macromolecule biosynthetic process; and ribosomal large subunit assembly. Predicted to act upstream of or within translation. Located in cytoplasm. Is active in synapse. Colocalizes with smooth endoplasmic reticulum. Is expressed in several structures, including limb; nervous system; otocyst; skin; and surface ectoderm. Human ortholog(s) of this gene implicated in autistic disorder and syndromic X-linked mental retardation 35. Orthologous to human RPL10 (ribosomal protein L10). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl10

Retroname Coord Strand Genomic Region ENSG
Rpl10P1 chr1:40393128-40393710 + Intragenic
ENSMUSG00000103230 UCSC
Rpl10P19 chr10:62771816-62772066 + Intragenic
ENSMUSG00000080971 UCSC
Rpl10P22 chr11:87195497-87195710 + Intragenic
ENSMUSG00000080976 UCSC
Rpl10P24 chr12:49822830-49823600 - Intergenic
ENSMUSG00000112605 UCSC
Rpl10P23 chr12:109860823-109861566 - Intergenic
ENSMUSG00000113625 UCSC
Rpl10P26 chr13:62532915-62533295 + Intergenic
ENSMUSG00000113151 UCSC
Rpl10P27 chr14:10978166-10978690 + Intergenic
ENSMUSG00000114850 UCSC
Rpl10P28 chr15:51952662-51953418 + Intergenic
ENSMUSG00000115457 UCSC
Rpl10P30 chr17:30202579-30202961 - Intergenic
ENSMUSG00000117639 UCSC
Rpl10P31 chr18:16972319-16973049 - Intergenic
ENSMUSG00000082608 UCSC
Rpl10P32 chr19:37272491-37273236 - Intragenic
ENSMUSG00000080885 UCSC
Rpl10P7 chr2:78343038-78343662 - Intergenic
ENSMUSG00000082701 UCSC
Rpl10P3 chr2:136240966-136241674 + Intergenic
ENSMUSG00000082647 UCSC
Rpl10P4 chr2:144103087-144103417 - Intragenic
ENSMUSG00000082436 UCSC
Rpl10P5 chr2:162647524-162647911 + Intergenic
ENSMUSG00000082296 UCSC
Rpl10P8 chr3:57717386-57717553 - Intragenic
ENSMUSG00000106006 UCSC
Rpl10P9 chr4:129273678-129274008 + Intergenic
ENSMUSG00000082468 UCSC
Rpl10P11 chr5:23136316-23137073 - Intragenic
ENSMUSG00000060879 UCSC
Rpl10P10 chr5:110476089-110476388 + Intragenic
ENSMUSG00000081256 UCSC
Rpl10P12 chr6:125234670-125234893 - Intergenic
ENSMUSG00000107965 UCSC
Rpl10P14 chr8:69251537-69252202 + Intragenic
ENSMUSG00000081745 UCSC
Rpl10P15 chr8:94949579-94950334 + Intragenic
ENSMUSG00000110679 UCSC
Rpl10P13 chr8:107654336-107655086 - Intragenic
ENSMUSG00000074108 UCSC
Rpl10P18 chr9:82955216-82955442 - Intragenic
ENSMUSG00000099188 UCSC
Rpl10P16 chr9:105437247-105438002 - Intergenic
ENSMUSG00000101597 UCSC
Rpl10P35 chrX:7413333-7413547 - Intergenic
ENSMUSG00000083402 UCSC
Rpl10P34 chrX:66213230-66213783 - Intergenic
ENSMUSG00000081598 UCSC
Rpl10P36 chrX:81444268-81444647 - Intragenic
ENSMUSG00000083113 UCSC
Rpl10P33 chrX:104611506-104611744 + Intergenic
ENSMUSG00000081976 UCSC
Rpl10P25 chr12:66330486-66331110 - Intragenic
ENSMUSG00000060499 UCSC
Rpl10P6 chr2:74686245-74686595 + Intragenic
ENSMUSG00000081156 UCSC
Rpl10P2 chr2:105384481-105385228 - Intergenic
ENSMUSG00000080859 UCSC
Rpl10P17 chr9:50255528-50256284 - Intergenic
ENSMUSG00000058443 UCSC
Rpl10P20 chr11:51856154-51856304 + Intergenic
N/A UCSC
Rpl10P21 chr11:53257266-53257797 + Intragenic
N/A UCSC
Rpl10P29 chr17:25525278-25525542 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_052835.3
GATAGGCCGCCTATATAAGGCGTGAGCAGGCGTGGGAGCGTCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGGCCGCCGCCCCGCCCGGTGTTACCGGTATTGTAAGAACAAGCCATACCCAAAGTCTCGTTTCTGCCGTGGTGTCCCTGATGCTAAGATCCGAATCTTTGATTTGGGACGGAAGAAAGCAAAAGTTGATGAATTCCCACTTTGTGGCCATATGGTGTCAGATGAATATGAGCAACTCTCTTCTGAAGCACTGGAGGCTGCCCGTATTTGTGCCAACAAATACATGGTAAAGAGTTGTGGCAAGGATGGCTTTCATATCCGAGTGAGGCTCCACCCTTTCCATGTCATCCGTATCAACAAGATGTTGTCCTGTGCTGGGGCTGACAGGCTCCAGACAGGGATGCGTGGTGCCTTTGGGAAGCCCCAGGGCACAGTGGCCAGGGTTCACATTGGCCAGGTCATCATGTCCATCCGAACCAAGTTGCAGAACAAGGAACATGTGATTGAGGCTCTGCGAAGAGCCAAGTTCAAGTTCCCTGGCCGCCAGAAGATCCACATCTCAAAGAAGTGGGGCTTCACCAAGTTTAatgcagatgaatttgaagacatGGTTGCTGAGAAGCGGCTCATTCCTGATGGCTGTGGTGTCAAATATATCCCCAATCGTGGTCCTCTGGACAAGTGGAGAGCCCTGCATTCCTGAAGGCTTCAATAGTTCTCCTATACCCTACCAAATCGTTCAATAATAAAATCTCGCATCAAGTTCGctta