Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SNX18
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name sorting nexin 18
Also known as SH3PX2|SH3PXD3B|SNAG1
Coordinate chr5:54517759-54607282
Strand +
Gene summary This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region, like some family members, but contains a SH3 domain. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from SNX18

Retroname Coord Strand Genomic Region ENSG
SNX18P26 chr13:18806915-18807584 - Intergenic
ENSG00000227568 UCSC
SNX18P29 chr18:14253984-14254645 + Intergenic
ENSG00000274214 UCSC
SNX33P1 chr19:16034788-16035661 - Intergenic
ENSG00000267609 UCSC
SNX18P30 chr19:19751181-19752669 + Intergenic
ENSG00000271499 UCSC
SNX18P31 chr20:30619488-30620188 - Intergenic
N/A UCSC
SNX18P13 chr21:13905384-13906046 - Intergenic
ENSG00000230965 UCSC
SNX18P10 chr21:8800833-8801452 - Intergenic
ENSG00000279213 UCSC
SNX18P32 chr22:11692384-11693003 - Intergenic
N/A UCSC
SNX18P27 chr4:49202565-49203259 - Intergenic
ENSG00000249828 UCSC
SNX18P7 chr9:33576701-33577380 + Intergenic
ENSG00000234373 UCSC
SNX18P3 chr9:38567020-38568158 - Intergenic
ENSG00000225345 UCSC
SNX18P9 chr9:64439609-64440535 + Intergenic
ENSG00000224185 UCSC
SNX18P28 chr9:97151513-97152182 - Intergenic
ENSG00000277103 UCSC
SNX18P1Y chrY:11178727-11178892 + Intergenic
ENSG00000274162 UCSC

Expression

Transcript Sequences

>NM_001102575.2
agtcggcgctgcgaagtggaggcgctgcgagcggagccgcgcggaggGCGCGACCGGCTGGTCCGGGCAGCGTGGGTTTGCCGCCTTCGGGGCTCCAGTCCGCGCGCCAGGGCTCGAGCAGTACCGCGGGCCCCTCAGGTGGGCCTCGGCTCGGGACGCCGGGAGTCGGGACCGCCAGTCGGGGCGCCGGGACCATGGCGCTGCGCGCCCGGGCGCTGTACGACTTCAGGTCGGAGAACCCAGGAGAGATCTCGCTGCGAGAGCACGAGGTGCTGAGCCTGTGCAGCGAGCAGGACATCGAGGGCTGGCTCGAGGGGGTCAACAGCCGCGGCGACCGCGGCCTCTTCCCGGCCTCCTATGTGCAGGTGATCCGCGCCCCCGAGCCTGGCCCGGCGGGAGACGGCGGCCCGGGCGCCCCGGCCCGCTACGCCAATGTGCCCCCCGGGGGCTTCGAGCCCCTGCCTGTCGCGCCCCCCGCCTCCTTCAAgccgccgcctgacgccttccaggcgctgctgcagccacagcaggcgccgcctccgAGCACCTTCCAGCCGCCCGGCGCGGGCTTCCCGTACGGCGGGGGCGCCCTGCAGCCGTCGCCTCAGCAGCTCTACGGCGGCTACCAGGCCAGCCAAGGCAGCGATGATGACTGGGACGACGAGTGGGACGACAGCTCCACGGTGGCGGACGAGCCGGGCGCTCTGGGCAGCGGAGCATACCCGGACCTCGACGGCTCGTCTTCGGCGGGTGTGGGCGCAGCCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTGTCCCTGGGTTCCCGCGGCGGCTCGGTCCCCCCGCAGCACCACCCGTCGGGGCCCAAGAGCTCGGCCACCGTGAGCCGCAACCTCAATCGCTTCTCCACCTTCGTCAAGTCCGGCGGGGAGGCCTTCGTGCTGGGGGAGGCGTCAGGCTTCGTGAAGGACGGGGACAAGCTGTGCGTGGTGCTGGGGCCCTATGGCCCCGAGTGGCAGGAGAACCCCTACCCGTTCCAGTGCACCATCGACGACCCCACCAAGCAGACCAAGTTCAAGGGCATGAAGAGCTACATCTCCTACAAGCTGGTGCCCACGCACACGCAGGTGCCGGTGCATCGGCGCTACAAGCACTTCGACTGGCTGTACGCGCGCCTGGCGGAGAAGTTCCCGGTCATCTCCGTGCCCCACCTGCCCGAGAAGCAGGCCACCGGCCGCTTCGAGGAGGACTTCATCTCTAAGCGCAGGAAGGGCCTGATCTGGTGGATGAACCACATGGCCAGCCACCCAGTGCTGGCGCAGTGCGACGTCTTCCAGCACTTCCTGACGTGCCCCAGCAGCACCGACGAGAAAGCCTGGAAGCAGGGCAAGAGGAAGGCCGAGAAGGACGAGATGGTGGGCGCCAACTTCTTCCTGACCCTTAGCACGCCCCCCGCCGCTGCCCTTGACCTGCAGGAGGTGGAGAGCAAGATCGACGGCTTCAAGTGCTTCACCAAGAAGATGGACGACAGCGCGCTGCAGCTCAACCACACGGCCAACGAGTTCGCGCGCAAGCAGGTGACCGGCTTCAAAAAGGAGTATCAGAAGGTGGGCCAGTCCTTCCGCGGCCTCAGCCAGGCCTTTGAGCTGGACCAGCAGGCCTTCTCGGTGGGCCTGAACCAGGCTATCGCCTTCACCGGAGATGCCTATGACGCCATTGGCGAGCTCTTCGCGGAGCAGCCCAGGCAGGACCTGGATCCCGTCATGGACCTATTAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATCATCCACGTTCAGAAAGGAGCTCTTACCAAAGTCAAGGAGAGTAGGCGACACGTGGAGGAAGGGAAGATGGAGGTGCAGAAGGCTGACGGCATTCAGGATCGCTGTAACACTATTTCTTTTGCCACTTTGGCTGAAATTCACCACTTCCATCAAATTCGAGTGAGAGACTTTAAATCACAGATGCAGCATTTCTTACAACAACAAATAATATTTTTCCAAAAAGTTACCCAGAAGTTGGAAGAAGCTCTTCACAAATATGATAGTGTTTAATGACTGGACGTTGGATTATGGACTTTTTCAGTTCAAGGATAATTTCTACAGCAGAATAAAAACTGCTGTCAAAGAGCTATTGCCAGCTATCAGTGGTGGTACAAGGACGGTTTTGTGTTCATCTGAAACCCAGCTGAATTTATAATTATGTAGGAAATAAACAGTTAATATGGTTATATAATAGAAACAGTACCACACATTGTAACTAAATTATACTATGTATGCCTACACTACCATTGTAACTTTTGGAATAATGATTATACTATTTGCCTTATTGCTTTTTGAAGTATGGGTATTTTAGTGCATACTTTGTAGACCTCAAAACCCATGAAGGGTCTCAAAGAAGCTGGCTGGATACAAGCCTGCTGTGGATGCCTTTTTACTCTCATAGATTGGGATTACCTAAATTCAACCTATTCTCTGTTTACAAACTCCAACTAGAGCAGCTATGCGACCTTGTGCCTTTAGACTCTTGGTTTTTCATTTCTCCCCGTCCCTTCCCCACCTTTTTAAAGTAAGCCACAGCTTTTCTGATTGAAAGAGTGAAAGGCCAGTGCATATAATGACAAACTGATGATAACCTTATATTGGCAGTAGGGGGTGGGGGGGGCGGTGGGGTGGGACGATCAGCTGTCATCAATTTGCACAGCAAGTATTATCTCCTGATAAGATGCTGGTGAATGCAGGGGAGTGAGATTCATTGCTCATCTTTGGATATGAAGTCTGTTAGGGAAGAAACAGTGCCACTATTCCCTTAGATGCAACAGTAGCATAGCCTCTTCACCCAGGCGTCCCAAAAGCTTGGCGTGAAGATTTCAGCAAACATGTCTTACAACATGAGGAGGAGGAGTCTAAATCAGTCAGGGGATAAAAGTATCGAATCATTGACAACACACACTTGGCTTTAGTTCTTAGGAGGGTTTTGTTTTTGTTTTTGTTTTTAGGTTGAAGATTTTCTTTTAATATTCAGTTTTTTGAAAAAAAATGGATCTACACTGTTAACTGATTGAGACTCCACTGTGATTCACTTGTTTACTTAAAAACTTTTCAGGGATGTCTGTAAATTTCAGTGTTAATATGTCATGAAAAGTGGTGTGGATTGATCTAAGGAGGGACCAGAAATAATTTTTGCTATTCCAAATACTGAAGGAAAAAGATAATTGATTTATACTATGTTTTAAAAAAAAAAAAGGTATTGATGAGCCCCCCCCCCCCAGGACATTTAACCTTAAAATTTATTTTAAATGTATTCTTTTATTATTATAAGGGAAATACAGATGGCTGATAAATACCAAAAAGATTCAAAAGCAGCTTAATTTAAAAAGCACAAAGAGATTCTGGCTTACAGTGCCCCAATCTCAATGTTTTTATAGTTGCTGAGCTAACTAATGTGATTATTGAGTTTACAGATTTAAAAATTGTCACTGTTAGAGTATCTACTGTTTTTATGAAGTCAAACTTATGCTGCCTCAGAAATCCCTGGGTACTGAAATGGTAACATGGAAGTGAAGAGGTCACTTTGAAATATTGGTGAGTCACAAAGATTAAAGAAAAGGATCAGTTTGCAGATACTCAGAAAAGGTTATTGAAATAATTACTGAACAGCACATTTTCTCTCTAAAAAGTAGTTTCATATGGGTTGTATTTTTAAGATCAGATTATCATTTTGATATTTGGTCAAAATTTTGTACCTTAGGTTACTTAGAGCCAGATTTAACATCATGAACATTATGTGGCTTTGTCTTTACTACAGATATGTGGAACTGTAACCAAATATGTTGTCTCTAAAACTTGTTGATTGCAAAATACAGTTCTATAAACAAAACCCATATGTATATATAAATGTTAATTTTGCGGAAGTCTGGAAATTATAACTATAGCATTTAAGTTTGAGTCTGTATTGGACAAATAAGCACCATGCTTTTCAAATGATTTAAAAATTACTTTTATTTGCCTCTTTATTTTGATGGTGGTTGGATTTTTTTTTTTTTAATAGTAAAATCACTAAACTTGTGCAATGGTAGCATGGAAATTATCTGAGGTATATTGTATGATTGTACTTTAGCCAGGGTGGACATAGCTTAAATTATAAAAACTAAAGATGAAAGTACAAGGAAGTATAAGTTATACTTATGTAAGTATAAATTCATGCTGCCTACTTCTAAGAGAAATTTCATTCTTCATAACCACATAACATTATAATGCCACTGATTCATACGGGATTTACATTAATTCTATGGGGGAGGACACTAGAATTATTAGTGTTCATTTTCATCTAAGATCTTTATTCTCTAACGTTCTTGGTCCTATTGAAACATTGCAGTATGCAAAACTACTGCAATGTTAAACCCAAGAGAAAAGCCATTATCATGTGTATGCTGGTCATCATGATCAGTGTGGTACAATTTTTAAAAATAAACTATCATGCCCTTCATGCCATTATTTGTCTTTATTTCTATGATTTATAATCCTGATATGTGATGTGTTTGTAACACAGGGTGTGCACTTGAGCCTGGTTTTACTGTTTTTATTAGACAGAGTTGTTTATATGCTGTAACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCGTCCAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATTATAGTAATTGAGATTTTCCCAGGCTTCACTGATACAGTTGTTTTGCATTTATTCACAATAATACAGCAGATTCTTAAATGCCGATTTTTAATTGTCTTAAATTTTGCTGCTGTTCTCATAATTAAGGACTTGAAAAATGTTTTAGTCTGTCAAGTATGTAAAGTTTGTGTAAAAACTTTTAAATGTCATTCTTAAGTTCATTGCCATAGCCATTTTCCATTTATGTCTTCATTTTCCAAAAATCAAATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCACCTTCATCTTTGGTTAACAGAATAAGTAAAACAGGGTATTATTTATTTGTAGTCTAGAAATGTTGAATATTGTTTTATTTCCTTCAAAATGTTATGATTAGTGCAGATCAGCCATGTTTATCTTTTTAAAAAATAAACAGGTTGCTTTATTTCTTA