Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Acadm
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name acyl-Coenzyme A dehydrogenase, medium chain
Also known as MCAD
Coordinate chr3:153627990-153650280
Strand -
Gene summary This gene encodes a homotetrameric mitochondrial flavoprotein and is a member of the acyl-CoA dehydrogenase family. Members of this family catalyze the first step of fatty acid beta-oxidation, forming a C2-C3 trans-double bond in a FAD-dependent reaction. As beta-oxidation cycles through its four steps, each member of the acyl-CoA dehydrogenase family works at an optimum fatty acid chain-length. This enzyme has its optimum length between C6- and C12-acylCoA. In mice, deficiency of this gene can cause neonatal mortality as well as fasting and cold intolerance. This gene has multiple, intronless pseudogenes. [provided by RefSeq, Nov 2012]

Retrocopy(s) from Acadm

Retroname Coord Strand Genomic Region ENSG
AcadmP1 chr8:97890391-97892240 + Intergenic
ENSMUSG00000110715 UCSC
AcadmP2 chr9:7042070-7042741 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_007382.5
CCGAAGTCAGTCTGAGAGCTCAGACCTCATCTGTGTGTAAAGGGACTCCCTAGGCCACGCCCCCGAGGTCTGCAGACTTTGACCCGCACGCCTCCGCACCCCTAGAGTCTAAGGCCcgcccctctcctccctccaagcCACGCCTCCTGGGGGCGGGACCCCCGTCCGTTTTGCTTGCTGCACGGAGGTGGTCGGAGGCAGCAGATCGAGGAGCCATCATGGCAGCGGCGTTCCGCAGAGGCTGCAGGgtcCTGAGAAGTGTTTCTCATTTTGAGTGTCGAACACAACACTCGAAAGCGGCTCACAAGCAGGAGCCCGGATTAGGGTTTAGTTTTGAGTTGACGGAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAAGTTTGCCAGAGAGGAGATTATCCCCGTCGCCCCGGAATATGACAAAAGCGGGGAGTACCCGTTCCCTCTCATCAAAAGAGCCTGGGAACTCGGCTTGATCAACGCGCACATTCCGGAAAGTTGCGGTGGCCTTGGCCTGGGAACGTTCGATGCTTGTTTAATTACCGAAGAGTTGGCGTATGGGTGTACAGGGGTGCAAACTGCTATTGAAGCAAATTCTTTGGGGCAAATGCCTGTGATTCTTGCTGGAAATgatcaacaaaaaaagaagtatttgGGGAGGATGACGGAGCAGCCAatgatgtgtGCTTACTGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAACTGGTATTTCTTGTTGGCACGTTCTAACCCAGATCCTAAAGTACCCGCTAGTAAAGCCTTTACTGGATTCATTGTGGAAGCCGACACCCCGGGAATACATATTGGAAAAAAGGAACTAAACATGGGCCAGCGATGCTCTGACACCAGAGGAATTGCTTTCGAAGACGTCAGAGTGCCTAAGGAAAATGTGTTAATCGGTGAAGGAGCAGGTTTCAAGATCGCAATGGGTGCTTTTGATAGAACCAGACCTACAGTCGCAGCTGGCGCTGTCGGGCTAGCCCAGAGAGCTCTAGACGAAGCCACGAAGTATGCCCTGGATAGGAAGACATTTGGAAAGCTGCTAGTGGAGCACCAAGGAGTTTCATTTCTGCTCGCAGAAATGGCGATGAAGGTTGAACTCGCTAGGCTCAGTTACCAGAGAGCAGCCTGGGAGGTTGACTCCGGTCGCCGGAACACTTACTATGCCTCGATTGCAAAGGCCTTTGCTGGAGACATTGCCAATCAGCTAGCCACTGACGCCGTGCAGATTTTCGGAGGCTATGGATTCAACACAGAGTACCCTGTGGAGAAGCTGATGAGGGACGCCAAGATCTATCAGATTTATGAAGGTACTGCACAAATTCAGAGGCTGATCATAGCTCGTGAGCACATtgaaaagtataaaaattaaCAGGAATTACTATTGAACGATGCATCACCCTCGTGTAACTAAGCTCCAAGCACTGTTGCTGCTTCAGGGGAAAAGGGCTTTACTGtcttcccaaggaaatgagatcaAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCGGAGGAACCTGTCTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTGGTCCTTAGCCCCGAATTGTGTTAGTTTGCTCTTTGATCACTTAAAATGGAAAAACACCCTGGACTTTTAATGTTCATTCAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAACACTGAAAATTTGTGGTAGATTGGACACGTCAGACTGTGACATAGCAGCATTTCTGTGCTGAActgttaattttataattttgattatatttgctttgttttgcacaAAAGAgtaaaaagtttatattcatattCTCCCATTATAAAACTAAAACTTTTCTGGGAATCTTAGTACTGAACGAGAATTTTATTTGTCTTGtttaaaataattcaataaaGCTAACCTTAACTTATTTT