Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Banf1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name BAF nuclear assembly factor 1
Also known as Baf|Bcrp1|L2bp1|L2bp1/Baf
Coordinate chr1:220744195-220746224
Strand -
Gene summary Enables identical protein binding activity. Predicted to be involved in chromosome condensation; chromosome segregation; and negative regulation of viral genome replication. Predicted to act upstream of or within DNA integration. Located in condensed chromosome and nucleus. Human ortholog(s) of this gene implicated in progeria. Orthologous to human BANF1 (BAF nuclear assembly factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Banf1

Retroname Coord Strand Genomic Region ENSG
Banf1P1 chr3:113689282-113689916 + Intragenic
 N/A UCSC
Banf1P2 chr7:121745762-121746442 + Intragenic
 N/A UCSC
Banf1P4 chr7:47066398-47067131 + Intergenic
 N/A UCSC
Banf1P5 chr9:65449214-65449926 + Intragenic
 N/A UCSC
Banf1P3 chr7:18470703-18471354 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_053631.3
CGAAGAACGTTCTAGCTGCTTGAGGTATCGGCGGGAGTAGCTGAGTGGCGCGAGGAGCCGTTACCAGAGCCGGAGCTGCTGGTTAATCCTGATCAAGATGACAACCTCTCAAAAGCACCGAGACTTCGTGGCAGAGCCCATGGGGGAAAAGCCAGTGGGGAGCCTGGCCGGGATTGGTGATGCCCTGGGCAAGAGGCTGGAGGAAAGGGGCTTTGACAAGGCGTATGTGGTCCTTGGCCAGTTTCTGGTACTAAAGAAAGATGAAGACCTCTTTCGAGAATGGCTAAAAGACACATGTGGTGCCAATGCCAAGCAGTCCCGGGACTGCTTTGGGTGCCTTCGAGAATGGTGTGATGCCTTCTTGTAATGTTCTCTGGGGACCCCTCAGCCCCCCTAGCCACAGCATAGAATCTCCAGAGTCTGCAGCAGGGCAGGGTGCCTCCCTGTCCTCCACGAAGGAAAAGATTGCTGTTGTCACCCTCATCTCCTATGTACTCCAGGGTCTTTTGGGAGTTCTCTCCCCCCAGCATTTCAACCTTTCTGGGTTTCTTGCCCTCGCATGCCTTCCCCTTCCCCTCCCCCTACAGTTCCATGGCAGCAGTTCCCAGCCTTCCTGAATGGATTACTGCCTCCTTCTCCCTCACCATCTGTTGGATGCCCTTTGACTCCTTTTTTTTGGCAAAAACAGTCACTGTCTTTATAAAAGATTTTTAAATTAATAAAGCTAGTGGCCTTCATACTTGTTGGTCTGTGTCAGAGAGCA
>XM_006230630.3
GTCTGTCCAGCCAAGGTCACCGAGAGAGCTTCAGGGTGGGCCTTGGCTACTGAGTCTGGGAATCTATAGATTGCCTTACGTGCACCACCTGTTAGTGCAAGCTAGTATATCGATCGGGTTAATCCTGATCAAGATGACAACCTCTCAAAAGCACCGAGACTTCGTGGCAGAGCCCATGGGGGAAAAGCCAGTGGGGAGCCTGGCCGGGATTGGTGATGCCCTGGGCAAGAGGCTGGAGGAAAGGGGCTTTGACAAGGCGTATGTGGTCCTTGGCCAGTTTCTGGTACTAAAGAAAGATGAAGACCTCTTTCGAGAATGGCTAAAAGACACATGTGGTGCCAATGCCAAGCAGTCCCGGGACTGCTTTGGGTGCCTTCGAGAATGGTGTGATGCCTTCTTGTAATGTTCTCTGGGGACCCCTCAGCCCCCCTAGCCACAGCATAGAATCTCCAGAGTCTGCAGCAGGGCAGGGTGCCTCCCTGTCCTCCACGAAGGAAAAGATTGCTGTTGTCACCCTCATCTCCTATGTACTCCAGGGTCTTTTGGGAGTTCTCTCCCCCCAGCATTTCAACCTTTCTGGGTTTCTTGCCCTCGCATGCCTTCCCCTTCCCCTCCCCCTACAGTTCCATGGCAGCAGTTCCCAGCCTTCCTGAATGGATTACTGCCTCCTTCTCCCTCACCATCTGTTGGATGCCCTTTGACTCCTTTTTTTTGGCAAAAACAGTCACTGTCTTTATAAAAGATTTTTAAATTAATAAAGCTAGTGGCCTTCATA