Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Gtpbp4
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name GTP binding protein 4
Also known as Crfg|RGD1563564
Coordinate chr17:63111086-63145618
Strand -
Gene summary Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in several processes, including negative regulation of collagen binding activity; protein stabilization; and regulation of protein modification process. Predicted to act upstream of or within maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Located in nucleus. Used to study end stage renal disease. Orthologous to human GTPBP4 (GTP binding protein 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gtpbp4

Retroname Coord Strand Genomic Region ENSG
Gtpbp4P1 chr2:169231613-169233730 - Intergenic
 N/A UCSC
Gtpbp4P2 chr4:37595449-37597723 + Intergenic
 N/A UCSC
Gtpbp4P3 chrX:1613649-1615954 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_053689.3
CCTCCGCTTCTCCAGGTTTCCTCGTGCGTTCCACCGCCGGCATGGCGCATTACAACTTCAAGAAGATTACGGTGGTGCCGTCAGCCAAGGACTTTATTGACCTGACATTATCCAAGACACAACGAAAGACTCCAACGGTTATTCATAAACATTATCAAATTCATCGAATTCGACATTTTTATATGAGAAAAGTCAAATTTACTCAACAGAATTATCATGACAGACTGTCACAGATTCTGTCCGATTTCCCCAAATTGGATGATATCCATCCATTTTATGCTGACTTGATGAATATTCTCTATGACAAGGATCACTACAAGTTGGCTCTAGGACAAATAAATATTGCCAAAAACTTGGTGGACAATGTTGCTAAAGATTACGTGCGACTTATGAAGTATGGTGATTCTCTCTACCGATGCAAGCAGCTGAAGCGCGCTGCCCTGGGGCGAATGTGTACGATTATCAAGAGGCAGAGGCAGAGTTTGGAGTACTTGGAACAAGTACGTCAACATCTATCCCGCTTGCCAACCATTGATCCAAATACAAGGACTCTACTTTTGTGTGGGTATCCAAATGTTGGGAAATCCAGCTTCATCAATAAGGTGACAAGAGCAGATGTGGATGTTCAGCCCTATGCATTTACCACCAAGTCTCTGTTTGTCGGGCACATGGATTATAAGTATCTGCGCTGGCAGGTTGTAGATACTCCAGGGATTTCGGATCATCCTTTGGAGGATCGGAACACCATTGAGATGCAGGCCATCACAGCCCTGGCCCAGCCCCGAGCTGCAGTTCTGTATGTGATGGATTTGTCTGAGCAGTGTGGACATGGGTTGAAGGAGCAATTAGAACTCTTCCAGAATATCAGACCCCTGTTTATCAACAAGCCTCTTATTGTTGTAGCAAACAAATGTGATGTGAAGAGAATAGCTGAACTTTCTGAAGAAGATCAGAAAATATTTCTAGACTTGCAGGCTGAAGGATTTCCTGTCATCGAGACCAGCACCCTGACTGAGGAAGGTGTCATTCAAGTTAAAACGGAGGCTTGTGATAGGCTTTTGGCTCACCGAGTAGAAACGAAAATGAAAGGAAATAAAGTGAATGAGGTTCTGAACAGATTGCACTTAGCTGTGCCCAACAAGAGAGATGACAAGGAGAGACCCCCGTTCATCCCAGAAGGAGTGGTAGCTCGTCGGAAGAGAATGGAGATCGCAGAACCCAAGAAGAAGAGGGAACGAGATCTTGAGCTGGAAATGGGAGATGATTATATTTTGGATCTTCAGAAATACTGGGACTTAATGAATTCATCTGAGAAGTATGATAAGATACCAGAGATTTGGGAAGGCCACAATGTTGCTGATTATATCGATCCTGCTATCATGAAGAAATTAGAAGAGTTGGAAAAGGAAGAAGAGCTCCGAACAGCTGCTGGGGAGTATGACAGTGAGTCTGAGAGTGAAGACGAGGAAATGGTGGAAATCCGACAGCTGGCAAAACAAATTAGAGAGAAGAAGAAGTTGAAAATTCTACAGTCCAAAGAAAAGAACACACAGGGACCCCGCATGCCCCGGACTGCTAAGAAGGTTCAACGGGCAGATTTAGAGAATGAGATGCGTAGTCTTGGCGTGGACATGGATGATAAAGACAATGCCCACTATGCAGTCCAGGCCAGAAGATCTCGGAGTGTCACCAGGAAAAGAAAACGAGAAGAGTCTGTTCCTCCCTCTTCCATAGCCCGCAGTCGCAGTCGGAGTTGCTCTAAAACGCCACGTGATGTTTCTGGTCTTCGGGATGTCAAGATGGTGAAGAAAGCCAAGACCATGATGAAGAAAGCCCAGAAGAAGATGAATCGCTTGGGGAAGAAGGGGGAAGCAGATAGGCATGTGTTTGATATGAAGCCCAAGCACCTACTCTCTGGGAAGAGGAAAGCTGGTAAAAAGGACAGGAGATAATGTCCTCTTCGGTCGGAGTAGTTTAACTAGACCCGTGATTATTTCTGAGTGTGTGATGGTGTGTTTTATAGAATTTGGGATCAACATCTGTTAACCAAAGAAACGATGGAAATGACTTTTAAATGCTTGTTGCTGTGCTGAAAACTGGTAAAGCCGAGTAAGCGTGTGGTGCCGTGGCCCTGTGCAGTCAGATGTTACCTGCAGAGCGCTCTGTACTGGATGACGCGCTTCTTTCACAGCCAAGGGACTCATTTTGCAGAAAAGATGTATTGGTGTAAGGAGGCTGCTTTGGTGGGGGAAAACTTTTGTAGTAGATCTTTTGACACCCAAAATACCTATTTTTGTTAAGAAAGTATTCCTGCTGGGAG