RCPedia: Genes

Summary

Gene Name	POU5F1	Plot displaying the genomic locations of a parental gene (in scaffold_m29_p_5) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Rhinolophus ferrumequinum
Full Name	N/A
Also known as	NULL
Coordinate	scaffold_m29_p_5:102660005-102664412
Strand	+
Gene summary	N/A

Retroname	Coord	Strand	Genomic Region	ENSG
POU5F1P1	scaffold_m29_p_1:59243233-59244281	-	Intergenic	N/A	UCSC
POU5F1P2	scaffold_m29_p_2:79268021-79269101	+	Intergenic	N/A	UCSC
POU5F1P3	scaffold_m29_p_5:41211665-41212702	-	Intragenic	N/A	UCSC
POU5F1P4	scaffold_m29_p_13:32671474-32672563	+	Intergenic	N/A	UCSC
POU5F1P5	scaffold_m29_p_19:4732435-4732750	+	Intragenic	N/A	UCSC

>POU5F1_x1
ATGGCGGGACACCTGGCTTCCGACTTTGCCTTCTCGCCCCCACCGGGTGGTGGAGGCGATGGGCCAGGAGGGCCGGAGCCCGGCTGGGTTGACCCTCGAACCTGGTTGAGCTTCCAGGGCCCTCCCGGCGGCTCAGGAATTGGGCCGGGCCTTGGCCCCGGCGCAGAGGTGTGGGGGATTCCCTCGTGCCCTCCGCCGTATGAGTTCTGCGGGGGGATGGCCTACTGTGGACCTCAGGTTGGAGTGGGGCTGGTGCCCCAAGGCGGCCTGGAGACCCCTCAGCCCGAGGGCGAGGCGGGAGCCGGAGTGGAGAGCAGCTCCGAAGGGACCTCCCCTGAACCCTGCGCTGCTCCGCCTGGGGCGGTGAAGCTGGACAAGGAGAAACTCAAGCAAAACCCTGAGGAGGAGGACATGAAAGCTCTGCAGAAAGACCTCGAGCAGTTTGCCAAGCTCCTGAAGCAGAAGAGGATCACCCTGGGGTACACCCAGGCCGACGTGGGGCTCACCCTGGGGGTTCTCTTTGGGAAGGTGTTCAGCCAGACAACCATCTGCCGCTTCGAGGCTCTGCAGCTCAGCTTGAAGAACATGTGTAAGCTGCGGCCCCTGCTGCAGAAGTGGGTGGAGGAAGCTGACAACAACGAGAATCTGCAGGAGATATGCAAAGCAGAGACGCTGGTGCAGGCCCGAAAGAGAAAGCGGACAAGCATCGAGAACCGAGTGAGGGGCAACCTGGAGAGCATGTTCCTGCAGTGCCCGAAGCCCACGCTGCAGCAGATCAGCCACATCGCCCAGCAGCTCGGGCTTGAGAAGGATGTGGTCCGAGTGTGGTTCTGCAACCGTCGCCAGAAGGGCAAACGATCAAGCAGTGACTATTCTCAACGAGAGGATTTTGAGGCTTCTGGGCCTCCTTTCTCAGGGGGACCAGTATCCTTTCCTCTGGCACCAGGGCCCCATTTTGGTACCCCAGGCTATGCGGGCCCTCACTTCACTACGCTGTACTCCTCAGTCCCTTTCCCTGAGGGTGAAGCCTTTCCCTCTGTGTCTGTGGCCACTCTGGGCTCTCCCATGCATTCAAACTGA