Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name PPIA
Plot displaying the genomic locations of a parental gene (in scaffold_m29_p_19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rhinolophus ferrumequinum
Full Name N/A
Also known as NULL
Coordinate scaffold_m29_p_19:57863994-57867458
Strand -
Gene summary N/A

Retrocopy(s) from PPIA

Retroname Coord Strand Genomic Region ENSG
PPIAP1 scaffold_m29_p_2:4803827-4804414 + Intergenic
 N/A UCSC
PPIAP3 scaffold_m29_p_5:2819577-2820145 + Intergenic
 N/A UCSC
PPIAP5 scaffold_m29_p_7:21311808-21312207 + Intergenic
 N/A UCSC
PPIAP7 scaffold_m29_p_12:41764286-41764880 + Intragenic
 N/A UCSC
PPIAP9 scaffold_m29_p_13:61925085-61925672 + Intergenic
 N/A UCSC
PPIAP10 scaffold_m29_p_15:16078253-16078840 - Intragenic
 N/A UCSC
PPIAP11 scaffold_m29_p_15:47767396-47767972 - Intergenic
 N/A UCSC
PPIAP15 scaffold_m29_p_20:19836491-19837075 - Intergenic
 N/A UCSC
PPIAP16 scaffold_m29_p_20:21039757-21040344 + Intragenic
Intragenic
 N/A UCSC
PPIAP17 scaffold_m29_p_20:33900686-33901258 - Intergenic
 N/A UCSC
PPIAP6 scaffold_m29_p_11:76107702-76107870 - Intergenic
 N/A UCSC
PPIAP14 scaffold_m29_p_19:7359723-7360260 + Intergenic
 N/A UCSC
PPIAP2 scaffold_m29_p_4:30578577-30579023 + Intergenic
 N/A UCSC
PPIAP4 scaffold_m29_p_7:19607699-19608017 + Intragenic
 N/A UCSC
PPIAP8 scaffold_m29_p_12:77668190-77668537 + Intergenic
 N/A UCSC
PPIAP12 scaffold_m29_p_16:47942979-47943458 - Intragenic
 N/A UCSC
PPIAP13 scaffold_m29_p_19:20978685-20978987 + Intragenic
 N/A UCSC
PPIAP18 scaffold_m29_p_20:4330589-4331064 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>PPIA_x1
GCTGCCTTCCAGACGCCGCCGCCCGGACTTACCCGCGCTCAACCATGGTCAACCCCACCGTGTTCTTCGACATCGCTGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAgAAAACTTTCGTGCCCTGAGCACTGGGGAGAGAGGATTTGGTTATAAAGGTTCCTGCTTTCACAGAATTATTCCAGGATTTATGTGCCAGGGTGGTGACTTCACACGCCATAACGGCACAGGTGGCAAGTCCATTTATGGGGAGAAGTTTGATGATGAGAATTTCATCCTGAAGCACACAGGTCCTGGCATCCTGTCCATGGCAAATGCTGGACCCAACACAAACGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAGATGGCATGAAGATTGTGGAAGCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACGAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCTGATGCATTTGACTGGTTTTCTCTTAACCAGACCATTCCTTCTGTAGTCAGGAGAGCACCCCTGCCCCATCTGCTCGGAACACCCCATAATCTTTGTGCTCTCGCTGCAGTTCGTTGGGTTTCGTATTTTCCTTGCCCCCCTCCAAGTCTAGCTGGGTTGCAGAGTTAAGTTTATGATTATGAAATAAAAGCT
>PPIA_x2
TGCCTTCCAGACGCCGCCGCCCGGACTTACCCGCGCTCAACCATGGTCAACCCCACCGTGTTCTTCGACATCGCTGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAgCTGTTTGCAGACAAAGTCCCAAAGACAGCAGAAAACTTTCGTGCCCTGAGCACTGGGGAGAGAGGATTTGGTTATAAAGGTTCCTGCTTTCACAGAATTATTCCAGGATTTATGTGCCAGGTTCCTCTTTCCCGTTCACAGGGTGGTGACTTCACACGCCATAACGGCACAGGTGGCAAGTCCATTTATGGGGAGAAGTTTGATGATGAGAATTTCATCCTGAAGCACACAGGTCCTGGCATCCTGTCCATGGCAAATGCTGGACCCAACACAAACGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAGATGGCATGAAGATTGTGGAAGCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACGAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCTGATGCATTTGACTGGTTTTCTCTTAACCAGACCATTCCTTCTGTAGTCAGGAGAGCACCCCTGCCCCATCTGCTCGGAACACCCCATAATCTTTGTGCTCTCGCTGCAGTTCGTTGGGTTTCGTATTTTCCTTGCCCCCCTCCAAGTCTAGCTGGGTTGCAGAGTTAAGTTTATGATTATGAAATAAAAGCT
>PPIA_x3
ATGGTCAACCCCACCGTGTTCTTCGACATCGCTGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAgCTGTTTGCAGACAAAGTCCCAAAGACAGCAGAAAACTTTCGTGCCCTGAGCACTGGGGAGAGAGGATTTGGTTATAAAGGTTCCTGCTTTCACAGAATTATTCCAGGATTTATGTGCCAGGGTGGTGACTTCACACGCCATAACGGCACAGGTGGCAAGTCCATTTATGGGGAGAAGTTTGATGATGAGAATTTCATCCTGAAGCACACAGGTCCTGGCATCCTGTCCATGGCAAATGCTGGACCCAACACAAACGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAGATGGCATGAAGATTGTGGAAGCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACGAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCTGA