Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tdg
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name thymine-DNA glycosylase
Also known as -
Coordinate chr7:27194000-27213676
Strand -
Gene summary Enables DNA-binding transcription factor binding activity and protein domain specific binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in nucleus. Orthologous to human TDG (thymine DNA glycosylase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tdg

Retroname Coord Strand Genomic Region ENSG
TdgP1 chr2:7230381-7231261 - Intergenic
N/A UCSC
TdgP2 chr2:8658822-8659702 - Intergenic
N/A UCSC
TdgP3 chr6:40517744-40520582 + Intergenic
N/A UCSC
TdgP4 chr17:40112029-40114968 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_053729.1
GATGTAGCAGCGTGGGAGGGGCCGAGGCCAGCGCCATCCGTCCACCGGCCGCCCGGATCCTGTGCTACTCTCTGGAGCAAGTTCAAGCTCTGTATTCATTTCCATTCCAACAAATGATGGCGGAGGCTCCGAACATGGCAGACGTGGCCGGACAGCAGATGCCTGCAGAAGCTCCTGCCCAGGATCCTGTGCCAGAGGCTCCAAAGAGAAGGAAAAGGAAAACCAGGGCAGCAGAGGCCCAGGACCCAGTGGAGCCCAAAAAGCCTGCTGCCTCAAAGAAATCTGGCAAGTCCAcaaaatcaaaagaaaagcaagagaaaatcaCAGACACCTTTAAAGTGAAAAGGAAAGTGGACCGGTTCAACGGTGTCTCTGAAGCTGAGCTTCTGACCAAGACTCTCCCTGACATTTTGACCTTCAATCTGGATATTGTAATTATTGGCATCAACCCAGGATTAATGGCCGCTTACAAAGGGCATCATTACCCTGGGCCCGGAAATCACTTCTGGAAGTGTCTGTTCATGTCTGGGTTGAGCGAGGTGCAGCTGAATCACATGGATGACCACACCTTACCTGGAAAATACGGCATCGGATTCACCAACATGGTGGAACGGACAACGCCAGGCAGCAAGGATCTGTCTAGTAAAGAATTCCGGGAAGGAGGGCGTATCCTAGTGCAGAAACTACAGAAATATCAGCCACGAATAGCGGTGTTTAATGGAAAATGTATTTATGAGATTTTCAGTAAAGAAGTTTTTGGAGTAAAGGTTAAGAACTTGGAATTTGGGCTTCAACCGCACAAGATCCCAGACACAGAAACTCTCTGCTACGTCATGCCGTCCTCCAGTGCCCGGTGCGCTCAGTTCCCTCGGGCGCAGGACAAAGTCCATTACTACATTAAGCTGAAGGACTTGCGAGACCAGCTGAAGGGCATCGAGCGCAGCACGGACGTTCAGGAGGTGCAGTACACGTTCGACCTGCAGCTCGCACAAGAGGACGCAAAGAGGACGGCTGTTAAGGAAGAAAAGTATGACCCAGGCTATGAGGCAGCGTATGGCGGTGCCTGTGGTGAAAACCCGTGTAATGGGGAACCTTGTGGCTTTGCTTCAAATGGGCTAACAGCCAACAGTGCGGAGCTGGGAGGAGAATCAGCTCCGAGCGACGTTCCAAACGGGCAGTGGATGGCGCAGTCGTTTGCAGAGCAGATCCCTTCTTTCAATAATTGTGGCAcaggagagcaggaagcaggaagccatgcaggaagccatgcTTAGCGAAGATGCCTCAGCTCTGGCTCAGCGCTGCAGTTTTAGTGCAGTTGTCAGGACACAGAGCCTCAGTTTGCTAACTGAGGAGTTTTAGTATTAATAGTACTTTACGCTAGTGGTGTAACTATATATGGAGCAGTTATATGGTATGAATAATCTGTGTAGTTTGGAAACCAAAAGTAGGGTGTTTTGTACTTGAGTTTTGTATTTGAATTGCCCATCATTCCAGCTTTTTATATACTATATTTCATGTATGAAGAAACTGGTTTTCTTCGAGGAGTCACTTCAATCTGTGATTTTAGAAAAGCAACAGTCTGAATATTTAAAGTTGATTCTTCACTGTGCATACCTATCTATGCCCTCATCCCTTTAGATGCCTCAGAAAGGCATGCTAGTAAGAGTCGACTCGGTAAAAATGCAGCTGTCAGTCTCCAGGTTTGAAGCTGACTAACCCTCCGTGGAATCAAAGCTGGGGCTGAACCAGAACCCCCTTACTCTCCCAGAGGTGTGTGTGGCAGATGGTTGGTAAGAGAAGAACGGTGTGGCCATACTTGGTGGGGATTTTGAGCCCTGCTGTTGACCTCTGCCTCTTGTGTGTTCGCCCCTCAGAGGCAGACACTTCTGCTGAGCTGGTAGGCTCCTGAGAACACAGTAGGACTTGTACAGCCTGCCACGCGTCTGTTTTACTGAATCCCTGTCAGTGTTCCTCACTGTTCTGATTTTAACCTTGACATGGAAAGTGATAAGAAACGAACTTTCCAGTGAGCAATGCGAGGGCGCAGGTGCTTAATAGTCCTGTTCCAACTGGTGCTATGTACGTGGGATGTCCTGATACAGGACGTTTCTTGCTAGGTAAAGCTAATCATTGATGAATGATTTAAAAATTATTGTCACTGCTATTGATTACTGTGGACTAAGTGAGCCTCATGAAAAAGTTGATTGGAATTTGTGCCTTTGTGGTTGCTAATGCATTTTCCACAGGGCTACAGACAGCCCACCAGGGCTGGTGGATATTAACCGTGGGTATTCAGAAATGCCTGGTGCATCCACGCCTGACCACTCTCGAGTTCTCTGACTTGATGGTACTCCTGGAGCTCGCTGGTTTTTCAATATGAAATGTCCACGAGGGTTTTGTATTTCACAGAGGCTATGTAGCCTGTTCTATGAATAATGAGAGAAGCAGTTTCTTGGTAGAAATTTTTAACATGCCTTTAGCTGTGGCAATGATGGACTTTCCTTTTCCTTCTGTCTGGGTCAGGCTGTGTACAAGTCATGTGATTTGAAAGGGGCACTGCACTGCTGTTTACATGGGCATTTCATGCGGGTGCTTTGAAGTGCCTTGCATCAGGGATTAGAATCAATTGAATTATTTTTTTTCATGGGACTGTAAAGCATGTAGTATTGCCTTGGTATGTAACTATTGTAGCTTTACCATGGAGAAATACCTTTAAATTATGACTGGAGAGTGGGTGCGTGGACCCTCTGAGTACTGTCCTGGTGCTTTTCCTTGAACATGGTGAGTAGTGAGTGCTGTGCACCCTGTACTGACAGGGTGGGATTTGTTTTCATTAAATAATACTGAGATTTTAAA