Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hmgn2
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name high mobility group nucleosomal binding domain 2
Also known as Hmg17
Coordinate chr5:152195359-152198813
Strand -
Gene summary Predicted to enable chromatin binding activity. Predicted to be involved in antimicrobial humoral immune response mediated by antimicrobial peptide; chromatin organization; and killing of cells of other organism. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II and regulation of development, heterochronic. Predicted to be located in cytoplasm and extracellular space. Predicted to be active in nucleus. Orthologous to human HMGN2 (high mobility group nucleosomal binding domain 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgn2

Retroname Coord Strand Genomic Region ENSG
Hmgn2P1 chr1:269019047-269019387 + Intergenic
N/A UCSC
Hmgn2P2 chr2:57727883-57728989 - Intergenic
N/A UCSC
Hmgn2P3 chr2:86139858-86140941 - Intergenic
N/A UCSC
Hmgn2P4 chr3:104674411-104675528 - Intergenic
N/A UCSC
Hmgn2P5 chr3:132281744-132282777 - Intergenic
N/A UCSC
Hmgn2P6 chr5:172941507-172942261 - Intragenic
N/A UCSC
Hmgn2P7 chr5:2383039-2383305 - Intragenic
N/A UCSC
Hmgn2P8 chr5:97127575-97128262 + Intergenic
N/A UCSC
Hmgn2P9 chr6:110964642-110965280 - Intergenic
N/A UCSC
Hmgn2P10 chr7:112889030-112890084 + Intragenic
N/A UCSC
Hmgn2P11 chr7:78299983-78301127 - Intragenic
N/A UCSC
Hmgn2P12 chr7:91755181-91756935 - Intergenic
N/A UCSC
Hmgn2P13 chr8:55183339-55183782 - Intragenic
N/A UCSC
Hmgn2P14 chr10:10997157-10998270 + Intragenic
N/A UCSC
Hmgn2P15 chr11:69288231-69289382 + Intragenic
N/A UCSC
Hmgn2P16 chr11:81908430-81909561 - Intergenic
N/A UCSC
Hmgn2P17 chr14:84609886-84610260 + Intragenic
N/A UCSC
Hmgn2P18 chr15:43692660-43693060 + Intragenic
N/A UCSC
Hmgn2P19 chr15:48303693-48304625 + Intragenic
N/A UCSC
Hmgn2P20 chr15:78967576-78967741 - Intergenic
N/A UCSC
Hmgn2P21 chr15:82194615-82194979 + Intragenic
N/A UCSC
Hmgn2P22 chr16:33942607-33943779 + Intergenic
N/A UCSC
Hmgn2P23 chr17:7621599-7622567 + Intergenic
N/A UCSC
Hmgn2P24 chr17:83359024-83359983 - Intragenic
N/A UCSC
Hmgn2P25 chr18:4243436-4243956 - Intragenic
N/A UCSC
Hmgn2P26 chr19:3608850-3609844 + Intergenic
N/A UCSC
Hmgn2P27 chrX:159518631-159519629 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001025624.2
GGTTCTAACCGGTCCGGGGCTCCCAGCGCTATAAAAACTTTATAAACCCCCCGGAGCCCGAGCAGTGTGAAGAAGCAGCGAGGACGACCCCCGGACGGACCAAACCCGTGCGCCGCTGTAAACCCGTGCTCAGCGCCGACGTCCCCTGCCGCCGCCATGCCCAAAAGAAAGGCTGAAGGGGATGCTAAAGGAGACAAAGCCAAGGTGAAGGACGAGCCACAGAGAAGATCTGCAAGGTTGTCTGCTAAACCTGCTCCTCCAAAGCCAGAGCCCAAGCCTAAAAAGGCCCCTGCAAAGAAGGGAGAGAAGGTACCCAAGGGGAAGAAGGGGAAAGCGGATGCTGGTAAGGATGCGAATAATCCTGCAGAAAACGGAGATGCCAAAACAGACCAGGCACAGAAAGCGGACGGTGCTGGAGATGCCAAGTGACGTGTGTGCGTTTTTGATAACTGTGTACTTCTGGTGACTGTACAGTTTGAAATACTATTTTTTATCAAGTTTTATAAAAATGCAGAAttttgttttactttttttttttttAAACTATATTGTTAGCACACGGAACACTTCATTGTTGTGGGGGGAAGGATCATGTGTCACCAACAAAGTATCACCCAAGCTGAATTGAGGACAGAAAATCTCTTTCCTTGATAATTTCAAAAGGTTCCTCTTGGCTTCCAGGAGAGACATCCTGGTCTTGCGTAGGTGGCCACCAAGGCCAAAAAAAGGCCTTGTGGTCTGAGGAAACTCTAAATTCATTTCTATATCCTGTTCCCTCCCCCTGTACCATCAACATAGACTTAATTCCCTTAAAACCAGAGACCTGTTGGGAGCCTCACCCCCAAAATTGGTTTTCTAGTCTATTGGGCGACGTGGACTTTGCAGTGACTTCGCGTGTTCTCGGAAGATCACTGGTTCCTTTTATAAAAGATTGTGGATCTTCAGATTGATTCTGCCATGTTCAGTTCCTGACAGTCAGGGTCGGCTTGTGGAAAGTTGTTAAACAACTTCCTTAATGTGAAATGTCAACCCTCACTCTAAGCTACTTCCCCTTTCAAAGCATTGAATGAAGACTTCATTGGGTTTTATAGTGGATTTCTGATTTTGGTAGTCTATACAAGAAGGGAATTTGAAAGTTCTTGTATATTGTTGACTGTCTGCCCATGTCCTGCCTGAAATACCATGATTGTTTATGAAAAGTATCTTTAATAAAGCTGGTTACAGTTAA