Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl31
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L31
Also known as Dts
Coordinate chr1:39406932-39410992
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in synapse. Is expressed in early conceptus and embryo. Orthologous to human RPL31 (ribosomal protein L31). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl31

Retroname Coord Strand Genomic Region ENSG
Rpl31P35 chr12:24810410-24810645 + Intergenic
ENSMUSG00000113062 UCSC
Rpl31P39 chr13:108356959-108357378 - Intragenic
ENSMUSG00000114519 UCSC
Rpl31P40 chr13:113928050-113928310 - Intergenic
ENSMUSG00000114395 UCSC
Rpl31P48 chr16:31163028-31163357 + Intergenic
ENSMUSG00000115997 UCSC
Rpl31P52 chr17:82098983-82099412 - Intergenic
ENSMUSG00000097897 UCSC
Rpl31P54 chr18:38545999-38546308 - Intergenic
ENSMUSG00000117986 UCSC
Rpl31P3 chr1:178981140-178981549 + Intragenic
N/A UCSC
Rpl31P6 chr1:58664337-58664726 - Intergenic
ENSMUSG00000100202 UCSC
Rpl31P5 chr1:186805327-186805540 - Intragenic
ENSMUSG00000089831 UCSC
Rpl31P37 chr12:91857632-91858122 - Intergenic
ENSMUSG00000066389 UCSC
Rpl31P41 chr13:73381553-73381865 + Intergenic
ENSMUSG00000113952 UCSC
Rpl31P38 chr13:100551998-100552487 + Intragenic
ENSMUSG00000051723 UCSC
Rpl31P12 chr4:137122539-137123020 + Intergenic
ENSMUSG00000070667 UCSC
Rpl31P34 chr12:116239600-116239939 + Intergenic
N/A UCSC
Rpl31P51 chr17:75791652-75791853 - Intragenic
N/A UCSC
Rpl31P7 chr1:64973538-64973976 + Intragenic
ENSMUSG00000097264 UCSC
Rpl31P8 chr1:66987688-66988149 - Intergenic
ENSMUSG00000094191 UCSC
Rpl31P1 chr1:129729091-129729582 - Intragenic
ENSMUSG00000094122 UCSC
Rpl31P2 chr1:136435130-136435523 + Intragenic
ENSMUSG00000099337 UCSC
Rpl31P31 chr10:96547697-96547949 + Intergenic
ENSMUSG00000112362 UCSC
Rpl31P33 chr11:67986402-67986715 - Intragenic
ENSMUSG00000083924 UCSC
Rpl31P32 chr11:107221504-107221913 + Intragenic
ENSMUSG00000081995 UCSC
Rpl31P36 chr12:54748080-54748513 - Intergenic
ENSMUSG00000072255 UCSC
Rpl31P43 chr14:6244362-6244797 - Intergenic
ENSMUSG00000114698 UCSC
Rpl31P42 chr14:22608116-22608537 - Intragenic
ENSMUSG00000059827 UCSC
Rpl31P45 chr15:83914516-83914941 + Intragenic
ENSMUSG00000081925 UCSC
Rpl31P46 chr15:90648448-90648943 - Intergenic
ENSMUSG00000067870 UCSC
Rpl31P47 chr16:16637576-16638044 - Intergenic
ENSMUSG00000116648 UCSC
Rpl31P49 chr16:38634329-38634779 + Intragenic
ENSMUSG00000081444 UCSC
Rpl31P50 chr16:87345928-87346394 - Intergenic
ENSMUSG00000090753 UCSC
Rpl31P53 chr17:85806036-85806468 + Intergenic
ENSMUSG00000097803 UCSC
Rpl31P56 chr19:30138014-30138430 + Intragenic
ENSMUSG00000058607 UCSC
Rpl31P57 chr19:51780639-51781071 + Intergenic
ENSMUSG00000097719 UCSC
Rpl31P9 chr3:37788823-37789286 + Intergenic
ENSMUSG00000097304 UCSC
Rpl31P10 chr3:39182818-39183070 - Intergenic
ENSMUSG00000104792 UCSC
Rpl31P11 chr3:94511684-94512156 - Intergenic
ENSMUSG00000062896 UCSC
Rpl31P16 chr5:21011063-21011500 + Intragenic
ENSMUSG00000082716 UCSC
Rpl31P17 chr5:25915199-25915623 + Intergenic
ENSMUSG00000104549 UCSC
Rpl31P18 chr5:83188447-83188881 - Intergenic
ENSMUSG00000106606 UCSC
Rpl31P14 chr5:123604548-123604985 + Intergenic
ENSMUSG00000082532 UCSC
Rpl31P15 chr5:150167280-150167747 + Intragenic
ENSMUSG00000107082 UCSC
Rpl31P22 chr6:7540929-7541345 + Intergenic
ENSMUSG00000107493 UCSC
Rpl31P19 chr6:36564694-36564910 + Intergenic
ENSMUSG00000106817 UCSC
Rpl31P20 chr6:47762891-47763332 - Intergenic
ENSMUSG00000097255 UCSC
Rpl31P21 chr6:71649047-71649689 - Intergenic
ENSMUSG00000108496 UCSC
Rpl31P23 chr6:83873894-83874312 + Intragenic
ENSMUSG00000107991 UCSC
Rpl31P27 chr7:75433911-75434163 + Intergenic
ENSMUSG00000097116 UCSC
Rpl31P24 chr7:100987308-100987632 + Intragenic
ENSMUSG00000110099 UCSC
Rpl31P25 chr7:112923531-112923875 + Intragenic
ENSMUSG00000082183 UCSC
Rpl31P26 chr7:135509156-135509576 - Intergenic
ENSMUSG00000110113 UCSC
Rpl31P29 chr8:35600329-35600709 - Intergenic
ENSMUSG00000097106 UCSC
Rpl31P30 chr9:110900216-110900664 - Intergenic
ENSMUSG00000097529 UCSC
Rpl31P4 chr1:182025432-182025643 - Intergenic
N/A UCSC
Rpl31P13 chr5:103495482-103495776 - Intergenic
N/A UCSC
Rpl31P28 chr8:111173719-111174150 + Intragenic
N/A UCSC
Rpl31P44 chr15:78486099-78486529 - Intragenic
N/A UCSC
Rpl31P55 chr19:16037160-16037416 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001252218.1
CCCGTGACCCGGAAGTTGTACGGCTACGCGACTTTCCCTCCCACAAACCCTCGCGCCCTTCCTTTCCTACTTGGGCCCGGCAGAGTGAGTATGGCTGCGGGGTCGCGGCTCTGAAATCCGGCGCCATCCGCGCCCGGCGCGGGACGGGCAGGCTCGGTGGGGTTTGTCCCGCGCCGCGCGGAGGCTCTGCGGTCCGGGGCGGTGGGAGGACGGCCTGCGGGGTACGGGTGCACCTTAGCTCGGGCTTGGGCTTTCCCACTACCTGCTTAGAGCCTCCCTCCCTGTCGCCTGCGTCTAGATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAGTTTGCCATGAAGGAAATGGGGACACCAGATGTGCGCATTGACACCAGGCTCAATAAAGCCGTCTGGGCCAAGGGAATAAGGAACGTTCCATATCGCATCCGAGTACGCTTGTCCAGAAAACGTAATGAGGATGAGGATTCCCCAAACAAGCTCTACACGCTGGTAACTTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAACGTGGATGAGAACTAACCTGCTCGTGTCAAATAAAGTTGCAGAACTGCCTTCAGGGTTTGGTTTTCCTTTCTGTTGTCTGCCTCAtgggtggaatttttgggtctaCAGGGTGTTGGAAATTAATCTGAGAATCTCTGTTCTGGGTACATGGGAAATTAGAAATACGTGAAACATTCTTTTCACAGAAGTCACTTTATTAGGATTGTGGATTTGGgttggttttgaaacagggtttcttgtgGCACTGCTTGTTCTATAGaatagggtggccttgaactcagaaatccacctgccttttcctccctAGTATTGGCAATTAAATGCCCAGCTTGTTTGTAAGCTCTCATTTTCAGTTCCAGGTTTATGTGTGAGCCTAAGATTAGGTAAAGATTGAGGTTATAACTTAAACGTACTGAATTAACTTATgttgtgtgggtcccaggaattggaCCTGGGACATCAACTCTGCCTTTCCAGCCATCTTTGCCAACCAGTAGCTCATCTCTGGGATGTGTCTGCCctcaaaatgacattttaaaaaagtcaGTACAAAAGAACGATTTTTATTAAAAACCTTGAGGACAAACATTAAA
>NM_001252219.1
CCCGTGACCCGGAAGTTGTACGGCTACGCGACTTTCCCTCCCACAAACCCTCGCGCCCTTCCTTTCCTACTTGGGCCCGGCAGAGTGAGTATGGCTGCGGGGTCGCGGCTCTGAAATCCGGCGCCATCCGCGCCCGGCGCGGGACGGGCAGGCTCGATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAGTTTGCCATGAAGGAAATGGGGACACCAGATGTGCGCATTGACACCAGGCTCAATAAAGCCGTCTGGGCCAAGGGAATAAGGAACGTTCCATATCGCATCCGAGTACGCTTGTCCAGAAAACGTAATGAGGATGAGGATTCCCCAAACAAGCTCTACACGCTGGTAACTTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAACGTGGATGAGAACTAACCTGCTCGTGTCAAATAAAGTTGCAGAACTGCCTTCAGGGTTTGGTTTTCCTTTCTGTTGTCTGCCTCAtgggtggaatttttgggtctaCAGGGTGTTGGAAATTAATCTGAGAATCTCTGTTCTGGGTACATGGGAAATTAGAAATACGTGAAACATTCTTTTCACAGAAGTCACTTTATTAGGATTGTGGATTTGGgttggttttgaaacagggtttcttgtgGCACTGCTTGTTCTATAGaatagggtggccttgaactcagaaatccacctgccttttcctccctAGTATTGGCAATTAAATGCCCAGCTTGTTTGTAAGCTCTCATTTTCAGTTCCAGGTTTATGTGTGAGCCTAAGATTAGGTAAAGATTGAGGTTATAACTTAAACGTACTGAATTAACTTATgttgtgtgggtcccaggaattggaCCTGGGACATCAACTCTGCCTTTCCAGCCATCTTTGCCAACCAGTAGCTCATCTCTGGGATGTGTCTGCCctcaaaatgacattttaaaaaagtcaGTACAAAAGAACGATTTTTATTAAAAACCTTGAGGACAAACATTAAA
>NM_053257.3
CCCGTGACCCGGAAGTTGTACGGCTACGCGACTTTCCCTCCCACAAACCCTCGCGCCCTTCCTTTCCTACTTGGGCCCGGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAGTTTGCCATGAAGGAAATGGGGACACCAGATGTGCGCATTGACACCAGGCTCAATAAAGCCGTCTGGGCCAAGGGAATAAGGAACGTTCCATATCGCATCCGAGTACGCTTGTCCAGAAAACGTAATGAGGATGAGGATTCCCCAAACAAGCTCTACACGCTGGTAACTTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAACGTGGATGAGAACTAACCTGCTCGTGTCAAATAAAGTTGCAGAACTGCCTTCAGGGTTTGGTTTTCCTTTCTGTTGTCTGCCTCAtgggtggaatttttgggtctaCAGGGTGTTGGAAATTAATCTGAGAATCTCTGTTCTGGGTACATGGGAAATTAGAAATACGTGAAACATTCTTTTCACAGAAGTCACTTTATTAGGATTGTGGATTTGGgttggttttgaaacagggtttcttgtgGCACTGCTTGTTCTATAGaatagggtggccttgaactcagaaatccacctgccttttcctccctAGTATTGGCAATTAAATGCCCAGCTTGTTTGTAAGCTCTCATTTTCAGTTCCAGGTTTATGTGTGAGCCTAAGATTAGGTAAAGATTGAGGTTATAACTTAAACGTACTGAATTAACTTATgttgtgtgggtcccaggaattggaCCTGGGACATCAACTCTGCCTTTCCAGCCATCTTTGCCAACCAGTAGCTCATCTCTGGGATGTGTCTGCCctcaaaatgacattttaaaaaagtcaGTACAAAAGAACGATTTTTATTAAAAACCTTGAGGACAAACATTAAA