Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Actg1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name actin, gamma, cytoplasmic 1
Also known as Actg|Actl|E51
Coordinate chr11:120236513-120239321
Strand -
Gene summary Actins are highly conserved proteins that are involved in various types of cell motility and maintenance of the cytoskeleton. In vertebrates, three main groups of actin isoforms, alpha, beta, and gamma, have been identified. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exist in most cell types as components of the cytoskeleton, and as mediators of internal cell motility. Actin, gamma 1, encoded by this gene, is a cytoplasmic actin found in non-muscle cells. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2015]

Retrocopy(s) from Actg1

Retroname Coord Strand Genomic Region ENSG
Actg1P12 chr10:24929185-24930199 + Intergenic
ENSMUSG00000112597 UCSC
Actg1P14 chr10:71855194-71855557 + Intergenic
ENSMUSG00000112185 UCSC
Actg1P17 chr13:56466100-56466317 - Intergenic
ENSMUSG00000114911 UCSC
Actg1P20 chr16:64737643-64739449 - Intergenic
ENSMUSG00000116811 UCSC
Actg1P2 chr4:103420521-103422426 + Intergenic
ENSMUSG00000059195 UCSC
Actg1P6 chr6:133737788-133740041 - Intergenic
ENSMUSG00000107950 UCSC
Actg1P7 chr7:5129695-5132310 - Intergenic
ENSMUSG00000109495 UCSC
Actg1P9 chr8:46682046-46683858 + Intergenic
ENSMUSG00000074978 UCSC
Actg1P11 chr9:38985323-38987141 + Intergenic
ENSMUSG00000111684 UCSC
Actg1P23 chrX:50306822-50308948 - Intergenic
ENSMUSG00000081350 UCSC
Actg1P13 chr10:33769380-33770252 - Intergenic
ENSMUSG00000112534 UCSC
Actg1P16 chr11:12886132-12887970 - Intergenic
ENSMUSG00000083859 UCSC
Actg1P15 chr11:107081910-107082902 + Intergenic
ENSMUSG00000081360 UCSC
Actg1P18 chr13:81212722-81214622 + Intergenic
ENSMUSG00000043889 UCSC
Actg1P19 chr14:111017444-111017611 + Intergenic
ENSMUSG00000115349 UCSC
Actg1P21 chr17:63653914-63654437 - Intragenic
ENSMUSG00000091426 UCSC
Actg1P22 chr17:92678738-92680552 - Intergenic
ENSMUSG00000117624 UCSC
Actg1P1 chr2:17802180-17802787 - Intergenic
ENSMUSG00000081851 UCSC
Actg1P4 chr6:10170133-10172735 - Intergenic
ENSMUSG00000107459 UCSC
Actg1P5 chr6:107858278-107858596 + Intragenic
ENSMUSG00000107475 UCSC
Actg1P10 chr8:65545556-65546677 - Intragenic
ENSMUSG00000109620 UCSC
Actg1P24 chrX:77725117-77726739 - Intergenic
ENSMUSG00000085610 UCSC
Actg1P25 chrX:85075601-85076623 - Intergenic
ENSMUSG00000080266 UCSC
Actg1P3 chr5:69189755-69190663 - Intergenic
N/A UCSC
Actg1P8 chr8:124619909-124620212 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001313923.1
GGTCTCACACTCCGCCGCCGGCTTACACTGCGCTTCTTGCCGCTCCTCCGTCGCCGCCGCGTCCTTCGCCGATCGCAATGGAAGAAGAAATCGCCGCACTCGTCATTGACAATGGCTCCGGCATGTGCAAAGCCGGCTTTGCTGGCGACGACGCCCCCAGGGCCGTGTTCCCTTCCATCGTAGGGCGCCCCCGACACCAGGGCGTCATGGTGGGCATGGGCCAGAAAGACTCATACGTGGGTGACGAGGCCCAGAGCAAGAGGGGTATCCTGACCCTGAAGTACCCTATCGAACACGGCATTGTCACTAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCTCCTGAGGAGCACCCGGTGCTTCTGACCGAGGCCCCCCTGAACCCCAAAGCTAACAGAGAGAAGATGACGCAGGGTTCTGTTCCTCTTCTCCTGGCATTTCCTCCCTGAAGCCTCCAGATAATGTTTGAAACCTTCAATACCCCAGCCATGTACGTGGCCATTCAGGCGGTGCTGTCCTTGTATGCATCTGGGCGCACCACTGGCATTGTCATGGACTCTGGTGACGGGGTCACACACACAGTGCCCATCTATGAGGGCTACGCCCTTCCCCACGCCATCTTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACTGAACGGGGCTACAGCTTTACCACCACTGCTGAGAGGGAAATTGTTCGTGACATAAAGGAGAAGCTGTGCTATGTTGCCCTGGATTTTGAGCAAGAAATGGCTACTGCTGCATCATCTTCCTCCTTGGAGAAGAGTTACGAGCTGCCCGACGGGCAGGTGATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCACTCTTCCAGCCTTCCTTCCTGGGCATGGAGTCCTGTGGTATCCATGAGACCACTTTCAACTCCATCATGAAGTGTGATGTGGATATCCGCAAAGACCTGTATGCCAATACAGTGCTGTCTGGTGGTACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATCACAGCCCTAGCACCTAGCACGATGAAGATTAAGATCATTGCTCCCCCTGAGCGCAAGTACTCAGTCTGGATCGGTGGCTCCATTCTGGCCTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGATGAGTCAGGCCCCTCCATCGTCCACCGCAAATGCTTCTAGATGGACTGAGCAGGTGCCAGGCATCTGCTGCATGAGCTGATATTGAAGTATCAATTTGCCCTGGCAAATGTACACACCTCATGCtagcctcatgaaactggaataaGCCTTTGAAAAGAAATTTGTCCTTGAAGCTTGTATCTGATATCAGCACTGGATCGTAGAACTTGTTGCTGATTTTTGACCTTGTATTCAAGTTAACTGCTCCCTTGGTATATGTTTAATACCCTGTGCATATCTTGATTTAGTCCTTAGTTCATGTGGCTCGGTcacttgggggctggggagagcaCGCTGTAGATGAGAAAGCCCCAgcctggtggatctctgtgagcaccACTGAGTGATCTGTGCAGGGTATTAACCAACAGCAGACTTCCAGGATTTCCTGAGGCTGGCAAGGGTTCCTGAACCAGTTACCACTCCTTCTTGCCAGTCTAACAGGGTGGGAAAGTCCGAGCCTTAGGACCCAGTTTCAGTTCTGGTTTCTTCCCTCCTGACCACCATCGGTTGTTAGTTGCCTTGAGTTGGGAACGTTTGCATCGACACCTGTAAATGTATTCATTCTTTAATTTATGTAAGGTTTTTTGTACTCAATTCTTTAAGAAATGACAAATTTTGGTTTTCTACTGTTCAATGAGAACATTAGGCCCCAGCAACACGTCATtgtgtaaagaaataaaagtgcTGCAGTAACTGACCA
>NM_009609.3
GGTCTCACACTCCGCCGCCGGCTTACACTGCGCTTCTTGCCGCTCCTCCGTCGCCGCCGCGTCCTTCGCCGATCGCAATGGAAGAAGAAATCGCCGCACTCGTCATTGACAATGGCTCCGGCATGTGCAAAGCCGGCTTTGCTGGCGACGACGCCCCCAGGGCCGTGTTCCCTTCCATCGTAGGGCGCCCCCGACACCAGGGCGTCATGGTGGGCATGGGCCAGAAAGACTCATACGTGGGTGACGAGGCCCAGAGCAAGAGGGGTATCCTGACCCTGAAGTACCCTATCGAACACGGCATTGTCACTAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCTCCTGAGGAGCACCCGGTGCTTCTGACCGAGGCCCCCCTGAACCCCAAAGCTAACAGAGAGAAGATGACGCAGATAATGTTTGAAACCTTCAATACCCCAGCCATGTACGTGGCCATTCAGGCGGTGCTGTCCTTGTATGCATCTGGGCGCACCACTGGCATTGTCATGGACTCTGGTGACGGGGTCACACACACAGTGCCCATCTATGAGGGCTACGCCCTTCCCCACGCCATCTTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACTGAACGGGGCTACAGCTTTACCACCACTGCTGAGAGGGAAATTGTTCGTGACATAAAGGAGAAGCTGTGCTATGTTGCCCTGGATTTTGAGCAAGAAATGGCTACTGCTGCATCATCTTCCTCCTTGGAGAAGAGTTACGAGCTGCCCGACGGGCAGGTGATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCACTCTTCCAGCCTTCCTTCCTGGGCATGGAGTCCTGTGGTATCCATGAGACCACTTTCAACTCCATCATGAAGTGTGATGTGGATATCCGCAAAGACCTGTATGCCAATACAGTGCTGTCTGGTGGTACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATCACAGCCCTAGCACCTAGCACGATGAAGATTAAGATCATTGCTCCCCCTGAGCGCAAGTACTCAGTCTGGATCGGTGGCTCCATTCTGGCCTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGATGAGTCAGGCCCCTCCATCGTCCACCGCAAATGCTTCTAGATGGACTGAGCAGGTGCCAGGCATCTGCTGCATGAGCTGATATTGAAGTATCAATTTGCCCTGGCAAATGTACACACCTCATGCtagcctcatgaaactggaataaGCCTTTGAAAAGAAATTTGTCCTTGAAGCTTGTATCTGATATCAGCACTGGATCGTAGAACTTGTTGCTGATTTTTGACCTTGTATTCAAGTTAACTGCTCCCTTGGTATATGTTTAATACCCTGTGCATATCTTGATTTAGTCCTTAGTTCATGTGGCTCGGTcacttgggggctggggagagcaCGCTGTAGATGAGAAAGCCCCAgcctggtggatctctgtgagcaccACTGAGTGATCTGTGCAGGGTATTAACCAACAGCAGACTTCCAGGATTTCCTGAGGCTGGCAAGGGTTCCTGAACCAGTTACCACTCCTTCTTGCCAGTCTAACAGGGTGGGAAAGTCCGAGCCTTAGGACCCAGTTTCAGTTCTGGTTTCTTCCCTCCTGACCACCATCGGTTGTTAGTTGCCTTGAGTTGGGAACGTTTGCATCGACACCTGTAAATGTATTCATTCTTTAATTTATGTAAGGTTTTTTGTACTCAATTCTTTAAGAAATGACAAATTTTGGTTTTCTACTGTTCAATGAGAACATTAGGCCCCAGCAACACGTCATtgtgtaaagaaataaaagtgcTGCAGTAACTGACCA