Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ifitm2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name interferon induced transmembrane protein 2
Also known as Ifitm3l|Ifitml
Coordinate chr1:213750219-213751399
Strand -
Gene summary Involved in heart development. Predicted to be located in late endosome membrane and lysosomal membrane. Predicted to be part of protein-containing complex. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in adenosquamous gallbladder carcinoma and gallbladder adenocarcinoma. Orthologous to several human genes including IFITM2 (interferon induced transmembrane protein 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ifitm2

Retroname Coord Strand Genomic Region ENSG
Ifitm2P1 chr1:195102234-195102583 + Intergenic
N/A UCSC
Ifitm2P2 chr1:224976172-224976533 + Intragenic
N/A UCSC
Ifitm2P3 chr4:28101479-28102091 + Intergenic
N/A UCSC
Ifitm2P4 chr4:58243101-58243513 - Intergenic
N/A UCSC
Ifitm2P5 chr5:155930764-155931253 - Intergenic
N/A UCSC
Ifitm2P6 chr12:9069044-9069614 + Intragenic
N/A UCSC
Ifitm2P7 chr13:73661197-73661704 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_030833.1
CAGAACCAGGGTAGCAGCAGCCATCCTCCAGACGGTGCGATTGTTCCAGAGTCAATACCATGAGCCACAATTCCCAAGCCTTCTTGCCCGCCAATGCCGGGCTTCCTCCAAGCTATGAGACAATCAAAGAGGAGTACGGGGTGACTGAGCTGGGGGAACCCAACAACTCAGCTGTCGTGAGGACCACCGTGATCAACATGCCCAGAGAGGTCTCTGTGCCTGACCATGTGGTCTGGTCCCTGTTCAATACGCTCTTCTTCAATGCCTGCTGCCTGGGCTTCATTGCCTATGCCTACTCTGTGAAGTCCAGGGACAGGAAGATGGTGGGCGATGTGATTGGAGCCCAGGCCTACGCCTCCACTGCCAAGTGCCTGAACATCAGCTCCCTGATCTTCAGTGTCCTCATGGTCATTATCTGCATCATCATTTTCTCTACCACCTCTGCGGTAGTCTTTCAGTCGCTTTCACAAAGAACGCCACATTCTGGATTCTAGCTGCCCTGTGTCCCACGGTCCACATCTGGCCCTCCCCCTGCCTGAGGCTGAGGGCTTGACCCTTTACCCTATGTGTATGCAAATGTTACCTTCGTATATCTGTCCACAGTGGAGTCAATAAAGTACACTTGGTGGC