Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name ATG4A
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name autophagy related 4A cysteine peptidase
Also known as APG4A|AUTL2|HsAPG4A
Coordinate chrX:108091778-108154671
Strand +
Gene summary Autophagy is the process by which endogenous proteins and damaged organelles are destroyed intracellularly. Autophagy is postulated to be essential for cell homeostasis and cell remodeling during differentiation, metamorphosis, non-apoptotic cell death, and aging. Reduced levels of autophagy have been described in some malignant tumors, and a role for autophagy in controlling the unregulated cell growth linked to cancer has been proposed. This gene encodes a member of the autophagin protein family. The encoded protein is also designated as a member of the C-54 family of cysteine proteases. [provided by RefSeq, Mar 2016]

Retrocopy(s) from ATG4A

Retroname Coord Strand Genomic Region ENSG
ATG4AP1 chrX:82998661-83000208 + Intergenic
 ENSG00000232735 UCSC

Expression

Transcript Sequences

>NM_052936.5
GTCCGTAGTCAAGTTGCCGGTGGAATTGGCCCAGGATGACAGCTGGAGAATGGAGTCAGTTTTATCCAAGTATGAAGATCAGATTACTATTTTCACTGACTACCTAGAAGAATATCCAGATACAGATGAGCTGGTATGGATCTTAGGGAAGCAGCATCTCCTTAAAACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTATGGTTTACATACAGAAGGAAATTTTCACCAATTGGTGGAACGGGCCCTTCATCAGATGCTGGTTGGGGATGTATGCTACGCTGTGGACAGATGATGCTGGCTCAAGCCCTTATCTGTAGACACTTGGGAAGGGACTGGAGCTGGGAGAAACAAAAAGAACAACCCAAAGAATACCAACGCATCCTACAGTGCTTCTTAGATAGAAAAGATTGTTGCTACTCTATCCATCAAATGGCACAAATGGGTGTAGGAGAAGGGAAATCAATTGGAGAATGGTTTGGACCAAATACAGTTGCACAGGTGTTAAAAAAACTTGCTTTATTTGACGAATGGAATTCCTTGGCTGTTTATGTTTCAATGGATAACACAGTGGTCATTGAAGATATCAAAAAAATGTGCCGTGTCCTTCCCTTGAGTGCTGACACAGCTGGTGACAGGCCTCCCGATTCTTTAACTGCTTCAAACCAGAGTAAGGGCACCTCTGCCTACTGCTCAGCCTGGAAACCCCTGCTGCTCATTGTGCCCCTTCGCCTGGGCATAAACCAAATCAATCCTGTCTATGTTGATGCATTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCATTAGGAGGAAAACCAAATAACGCGTATTATTTCATAGGATTCTTAGGTGACGAGCTCATCTTCTTGGACCCTCATACAACCCAGACCTTTGTTGACACTGAAGAGAATGGAACGGTTAATGACCAGACTTTCCATTGCCTGCAGTCCCCACAGCGAATGAACATCCTAAACCTGGATCCTTCAGTTGCATTGGGATTTTTCTGCAAAGAAGAAAAAGACTTTGATAACTGGTGTAGCCTTGTTCAGAAGGAAATTCTAAAGGAGAATTTAAGGATGTTTGAATTAGTTCAGAAACATCCATCACACTGGCCTCCCTTTGTACCTCCAGCCAAGCCAGAAGTGACAACCACTGGGGCAGAATTCATTGACTCTACTGAGCAACTGGAGGAGTTTGATCTGGAGGAAGATTTTGAGATTCTGAGTGTGTAGAATCCTGGGAACTCAACTTGAAGGTCTGTCTTCCATCTGGCACCATAAAAACATGAACTTATTGCATAAAACTTTTCTAGTCAGCAAGTGCCTGATATGCCAATAGCATACAAACTCAATAGCAATCATGACTGAGCCAATCACTGTTTCTCAGAAAAACAAAACAAAACAAAACAAATGACAGTAACCCTTCCCCGGAAAGAAATAGAACAATCATGGAGCCTAGGAGCAGAGAGATGAGGAGGAGTTCATTGCTTCCCAGCTTGTGTTATATGGCTACAGCAAGTCTTCAGCTGCTGCAATGAGGAAATGGGCATCTGGAAGACAAACAGCAACTCTCAGCTTGCTTCAAGAACCAGCAGATAAGAGATGGTTAAGCTGTTCTTCACCCTTTCAGATGTGACCTCTTTTGGACTAAGCAGCAATCTGTTCTCTTGCTCAAATAATAAAGTGACTGAATCAGGGAGGAAAAGGTTCTTGTTAAATTATTTGATTGTGTAGTTGAAGTAATTATAATTTATATCAAAACGTTTGTCAAAGAAACGATGTCAAATATACACTTCTTGATCTCCCTTCTGTTTGCGGGGATCTTACTATTTGATGGGTCACTGTCCCCATTCTTACTGATACTTTTGTCAGATATCACCCTGTCCTTAAATCATGATCACTTAAATcaggggtcagcaaactttttctgtaaagggccagacgggaaatattttgggctttgcaggccatgcggcctctgtcacatctactcaactctgctgttgacatgcaaaagcagcaatagacaatatgcgtgtaaatgagtgtggctgtaatccaagaaaactttatttacaaaagcaggtggagggctgggtttggcctgcaggctgtagcttgccaatcAGTGACTTAAATTGTTGATTTTTGTTTGATAAATTAAAAATAAATTGTGTTTGAAGTATACCCTA