Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPSA
Plot displaying the genomic locations of a parental gene (in scaffold_m29_p_16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rhinolophus ferrumequinum
Full Name N/A
Also known as NULL
Coordinate scaffold_m29_p_16:13282051-13287268
Strand -
Gene summary N/A

Retrocopy(s) from RPSA

Retroname Coord Strand Genomic Region ENSG
RPSAP1 scaffold_m29_p_1:100263695-100264686 - Intergenic
N/A UCSC
RPSAP3 scaffold_m29_p_2:11137466-11138407 - Intergenic
N/A UCSC
RPSAP4 scaffold_m29_p_2:79242980-79243915 - Intergenic
N/A UCSC
RPSAP10 scaffold_m29_p_6:44278220-44278854 - Intergenic
N/A UCSC
RPSAP11 scaffold_m29_p_6:82108337-82109334 + Intergenic
N/A UCSC
RPSAP13 scaffold_m29_p_7:426432-427427 + Intragenic
N/A UCSC
RPSAP17 scaffold_m29_p_9:44795834-44796545 - Intergenic
N/A UCSC
RPSAP18 scaffold_m29_p_9:46120327-46121075 + Intergenic
N/A UCSC
RPSAP19 scaffold_m29_p_9:78205331-78206264 + Intergenic
N/A UCSC
RPSAP22 scaffold_m29_p_11:73285871-73286664 + Intergenic
N/A UCSC
RPSAP26 scaffold_m29_p_15:19819363-19820056 + Intergenic
N/A UCSC
RPSAP29 scaffold_m29_p_16:25570654-25571248 + Intergenic
N/A UCSC
RPSAP32 scaffold_m29_p_19:21697691-21698012 + Intragenic
N/A UCSC
RPSAP33 scaffold_m29_p_19:25798769-25799208 - Intergenic
N/A UCSC
RPSAP35 scaffold_m29_p_21:25195391-25196214 + Intragenic
N/A UCSC
RPSAP39 scaffold_m29_p_27:20206620-20206835 - Intergenic
N/A UCSC
RPSAP8 scaffold_m29_p_5:25416101-25416746 + Intergenic
N/A UCSC
RPSAP9 scaffold_m29_p_6:28110949-28111432 + Intergenic
N/A UCSC
RPSAP12 scaffold_m29_p_7:13715585-13716367 + Intergenic
N/A UCSC
RPSAP21 scaffold_m29_p_11:71541808-71542049 - Intergenic
N/A UCSC
RPSAP23 scaffold_m29_p_12:27640820-27641059 + Intergenic
N/A UCSC
RPSAP27 scaffold_m29_p_15:63524363-63525029 + Intragenic
N/A UCSC
RPSAP2 scaffold_m29_p_1:83246462-83247135 - Intergenic
N/A UCSC
RPSAP6 scaffold_m29_p_4:66160316-66161165 + Intergenic
N/A UCSC
RPSAP7 scaffold_m29_p_4:69043016-69043633 + Intergenic
N/A UCSC
RPSAP14 scaffold_m29_p_7:7373090-7373799 + Intragenic
N/A UCSC
RPSAP15 scaffold_m29_p_8:23922544-23923395 + Intragenic
N/A UCSC
RPSAP16 scaffold_m29_p_8:43643066-43643481 - Intergenic
N/A UCSC
RPSAP20 scaffold_m29_p_10:42270237-42271079 - Intragenic
N/A UCSC
RPSAP24 scaffold_m29_p_14:33681168-33681753 + Intragenic
N/A UCSC
RPSAP25 scaffold_m29_p_14:66238542-66239429 + Intragenic
N/A UCSC
RPSAP28 scaffold_m29_p_16:12253766-12254648 + Intragenic
N/A UCSC
RPSAP30 scaffold_m29_p_17:34768926-34769603 - Intergenic
N/A UCSC
RPSAP31 scaffold_m29_p_18:42374406-42375237 - Intergenic
N/A UCSC
RPSAP34 scaffold_m29_p_20:13854248-13854928 - Intragenic
N/A UCSC
RPSAP36 scaffold_m29_p_23:7579634-7580454 - Intergenic
N/A UCSC
RPSAP37 scaffold_m29_p_25:24216475-24217352 + Intragenic
N/A UCSC
RPSAP38 scaffold_m29_p_25:25553681-25554939 + Intergenic
N/A UCSC
RPSAP5 scaffold_m29_p_3:98969399-98970108 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>RPSA_x1
CCTTTCCGCGCTACCCAGAGAGGGATCCACACGGCTTTGTACTCGGTTCCCACGTAACTTAAAGGGAATCTTTCACAATGTCCggagcccttgatgtcctgcaaatgaaagagGAGGATGTCCTCAAATTCCTTGCAGCAGGAACCCATTTAGGTGGCACCAACCTTGACTTCCAGATGGAACAGTACATCTACAAACGGAAAAGTGATGGCATCTACATCATAAATCTGAAGAGAACCTGGGACCTTCACTAACCAGATCCAGGCAGCCTTCCGGGAGCCGAGACTCCTGGTGGTGACCGATCCCCGGGCTGACCACCAACCTCTCACAGAGGCATCCTACGTTAACCTGCCGACCATCGCTCTGTGCAACACAGACTCTCCTCTGCGCTATGTGGACATTGCCATCCCTTGCAACAACAAGGGCGCTCACTCCGTGGGTCTGATGTGGTGGATGCTGGCCCGGGAAGTCCTGCGCATGCGTGGTACCATCTCCCGTGAGCACGCGTGGGAGGTCATGCCTGATCTCTACTTCTACAGAGACCCTGAGGAGATTGAAAAGGAAGAGCAGGCCGCCGCTGAGAAGGCCGTGACCAAGGAGGAGTTCCAGGGCGAATGGACCGCTCCAGCGCCCGAGTTCACTGCTGCTCAGCCTGAGGTCGCGGACTGGTCTGAAGGCGTGCAGGTGCCCGCCGTCCCCATTCAGCAGTTTCCTACTGAAGACTGGAGTGCCCAGCCTGCCACTGAAGACTGGTCTGCAGCCCCCACTGCTCAGGCCACTGAATGGGTGGGAACGACCACTGAGTGGTCCTGAGCTGTTCTTCCACAAACTCTTACGCAAAATGGAAATAAGGTTGATGGAAAATAAACAGTTTCT
>RPSA_x2
CTTTCCGCGCTACCCAGAGAGGGATCCACACGGCTTTGTACTCGGTTCCCACGTAACTTAAAGGGAATCTTTCACAATGTCCggagcccttgatgtcctgcaaatgaaagagGAGGATGTCCTCAAATTCCTTGCAGCAGGAACCCATTTAGGTGGCACCAACCTTGACTTCCAGATGGAACAGTACATCTACAAACGGAAAAGTGATGGCATCTACATCATAAATCTGAAGAGAACCTGGGAGAAGCTTCTGCTGGCAGCTCGTGCCATTGTTGCCATTGAAAACCCGGCTGATGTCAGTGTCATATCGTCCAGAAATACTGGCCAGCGAGCTGTGCTGAAGTTTGCCGCTGCCACCGGAGCCACGCCTATCGCCGGCCGCTTCACTCCTGGGACCTTCACTAACCAGATCCAGGCATCCTACGTTAACCTGCCGACCATCGCTCTGTGCAACACAGACTCTCCTCTGCGCTATGTGGACATTGCCATCCCTTGCAACAACAAGGGCGCTCACTCCGTGGGTCTGATGTGGTGGATGCTGGCCCGGGAAGTCCTGCGCATGCGTGGTACCATCTCCCGTGAGCACGCGTGGGAGGTCATGCCTGATCTCTACTTCTACAGAGACCCTGAGGAGATTGAAAAGGAAGAGCAGGCCGCCGCTGAGAAGGCCGTGACCAAGGAGGAGTTCCAGGGCGAATGGACCGCTCCAGCGCCCGAGTTCACTGCTGCTCAGCCTGAGGTCGCGGACTGGTCTGAAGGCGTGCAGGTGCCCGCCGTCCCCATTCAGCAGTTTCCTACTGAAGACTGGAGTGCCCAGCCTGCCACTGAAGACTGGTCTGCAGCCCCCACTGCTCAGGCCACTGAATGGGTGGGAACGACCACTGAGTGGTCCTGAGCTGTTCTTCCACAAACTCTTACGCAAAATGGAAATAAGGTTGATGGAAAATAAACAGTTTCT
>RPSA_x4
ATGTCCggagcccttgatgtcctgcaaatgaaagagGAGGATGTCCTCAAATTCCTTGCAGCAGGAACCCATTTAGGTGGCACCAACCTTGACTTCCAGATGGAACAGTACATCTACAAACGGAAAAGTGATGGCATCTACATCATAAATCTGAAGAGAACCTGGGAGAAGCTTCTGCTGGCAGCTCGTGCCATTGTTGCCATTGAAAACCCGGCTGATGTCAGTGTCATATCGTCCAGAAATACTGGCCAGCGAGCTGTGCTGAAGTTTGCCGCTGCCACCGGAGCCACGCCTATCGCCGGCCGCTTCACTCCTGGGACCTTCACTAACCAGATCCAGGCAGCCTTCCGGGAGCCGAGACTCCTGGTGGTGACCGATCCCCGGGCTGACCACCAACCTCTCACAGAGGCATCCTACGTTAACCTGCCGACCATCGCTCTGTGCAACACAGACTCTCCTCTGCGCTATGTGGACATTGCCATCCCTTGCAACAACAAGGGCGCTCACTCCGTGGGTCTGATGTGGTGGATGCTGGCCCGGGAAGTCCTGCGCATGCGTGGTACCATCTCCCGTGAGCACGCGTGGGAGGTCATGCCTGATCTCTACTTCTACAGAGACCCTGAGGAGATTGAAAAGGAAGAGCAGGCCGCCGCTGAGAAGGCCGTGACCAAGGAGGAGTTCCAGGGCGAATGGACCGCTCCAGCGCCCGAGTTCACTGCTGCTCAGCCTGAGGTCGCGGACTGGTCTGAAGGCGTGCAGGTGCCCGCCGTCCCCATTCAGCAGTTTCCTACTGAAGACTGGAGTGCCCAGCCTGCCACTGAAGACTGGTCTGCAGCCCCCACTGCTCAGGCCACTGAATGGGTGGGAACGACCACTGAGTGGTCCTGA
>RPSA_x5
ATGTCCggagcccttgatgtcctgcaaatgaaagagGAGGATGTCCTCAAATTCCTTGCAGCAGGAACCCATTTAGGTGGCACCAACCTTGACTTCCAGATGGAACAGTACATCTACAAACGGAAAAGTGATGGCATCTACATCATAAATCTGAAGAGAACCTGGGAGAAGCTTCTGCTGGCAGCTCGTGCCATTGTTGCCATTGAAAACCCGGCTGATGTCAGTGTCATATCGTCCAGAAATACTGGCCAGGTTTGTGGAACAATATGCTTGGTTTTCATTCGAGCTGTGCTGAAGTTTGCCGCTGCCACCGGAGCCACGCCTATCGCCGGCCGCTTCACTCCTGGGACCTTCACTAACCAGATCCAGGCAGCCTTCCGGGAGCCGAGACTCCTGGTGGTGACCGATCCCCGGGCTGACCACCAACCTCTCACAGAGGCATCCTACGTTAACCTGCCGACCATCGCTCTGTGCAACACAGACTCTCCTCTGCGCTATGTGGACATTGCCATCCCTTGCAACAACAAGGGCGCTCACTCCGTGGGTCTGATGTGGTGGATGCTGGCCCGGGAAGTCCTGCGCATGCGTGGTACCATCTCCCGTGAGCACGCGTGGGAGGTCATGCCTGATCTCTACTTCTACAGAGACCCTGAGGAGATTGAAAAGGAAGAGCAGGCCGCCGCTGAGAAGGCCGTGACCAAGGAGGAGTTCCAGGGCGAATGGACCGCTCCAGCGCCCGAGTTCACTGCTGCTCAGCCTGAGGTCGCGGACTGGTCTGAAGGCGTGCAGGTGCCCGCCGTCCCCATTCAGCAGTTTCCTACTGAAGACTGGAGTGCCCAGCCTGCCACTGAAGACTGGTCTGCAGCCCCCACTGCTCAGGCCACTGAATGGGTGGGAACGACCACTGAGTGGTCCTGA