Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name RTRAF
Plot displaying the genomic locations of a parental gene (in scaffold_m29_p_8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rhinolophus ferrumequinum
Full Name N/A
Also known as NULL
Coordinate scaffold_m29_p_8:39722228-39737816
Strand -
Gene summary N/A

Retrocopy(s) from RTRAF

Retroname Coord Strand Genomic Region ENSG
RTRAFP1 scaffold_m29_p_1:108876888-108877558 + Intergenic
 N/A UCSC
RTRAFP3 scaffold_m29_p_3:74978056-74978527 - Intergenic
 N/A UCSC
RTRAFP9 scaffold_m29_p_18:37025880-37026135 - Intergenic
 N/A UCSC
RTRAFP10 scaffold_m29_p_18:6301052-6301731 + Intergenic
 N/A UCSC
RTRAFP12 scaffold_m29_p_23:40640250-40641222 - Intergenic
 N/A UCSC
RTRAFP14 scaffold_m29_p_25:6917474-6919595 + Intragenic
 N/A UCSC
RTRAFP2 scaffold_m29_p_3:444628-445362 + Intergenic
 N/A UCSC
RTRAFP4 scaffold_m29_p_4:53731386-53732116 + Intragenic
 N/A UCSC
RTRAFP5 scaffold_m29_p_7:1139369-1140080 - Intragenic
 N/A UCSC
RTRAFP6 scaffold_m29_p_10:48471123-48471837 - Intergenic
 N/A UCSC
RTRAFP7 scaffold_m29_p_10:89428200-89428929 - Intragenic
 N/A UCSC
RTRAFP8 scaffold_m29_p_12:1000668-1000847 - Intergenic
 N/A UCSC
RTRAFP11 scaffold_m29_p_19:2804397-2805125 + Intergenic
 N/A UCSC
RTRAFP13 scaffold_m29_p_25:23494679-23495329 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>RTRAF_x1
GCCTGCGCCACCCGCACCTCCTCCTCGCCTCTCCTCTCCCGGCCCGAGCCCGGGGAACCAGAGCGAGAAGCGGGGACTATGTTCCGACGCAAGCTGACGGCCCTCGACTACCACAACCCTACTGGCTTTAACTGCAAAGATGAAACAGAATTTAGAAACTTTATTGTTTGGCTTGAAGACCAGAAAATCAGACACTACAAGATTGAAGACAGAGTATCTCAGAGATGTTAATTGTCCATTCAAGATTCAAGAGAGACAAGAAGCAATTGACTGGCTTCTTGGTTTAGCTGTTAGACTTGAATATGGAGATAATGCTGAAAAATACAAGGACCTGGTACCTGATAATACAAAAAATGCTGACAATGCAGCTAAAAATGCAGAGCCATTGATCAATTTGGATGTAAGTAATCCTGATTTTAAGGCTGGTGTAATGGCTTTGGCTAACCTTCTTCAGATTCAGCGTCATGATGATTACCTGGTAATGCTTAAGGCAATTCGCATTTTGGTCCAGGAGCGCCTGACACAGGATGCAGTTGCTAAAGCAAATCAAACAAAAGAGGGCTTGCCTGTTGCTTTAGACAAGCATATTCTTGGTTTTGACACAGGAGATGCAGTTCTTAATGAAGCTGCTCAAATTCTGCGATTGCTGCATATAGAAGAACTCAGAGAGCTACAGACAAAAATTAATGAAGCCATAGTAGCTGTTCAGGCAATTATTGCCGATCCAAAGACAGACCACAGACTGGGGAAAGTTGGAAGATGAACATTTTAGGATTTCAGCCTCTTACCTACTTAGTACAGTTGGGAACCATGTATGCTCTGGCATGTGTTTGGAAAATCAGATGTCACATTTTCGAGGGAAGAATCCCAGAAAATTGACTATGTTCTAGAGATTTATCATCGTTGCTTTTTCTTTAATAAAGTTTGGGAAAGTGG
>RTRAF_x2
ATGTTCCGACGCAAGCTGACGGCCCTCGACTACCACAACCCTACTGGCTTTAACTGCAAAGATGAAACAGAATTTAGAAACTTTATTGTTTGGCTTGAAGACCAGAAAATCAGACACTACAAGATTGAAGACAGAGGTAATTTAAGAAACATACACAGCAGTGACTGGCCCAAGTTCTTTGAAAAGTATCTCAGAGATGTTAATTGTCCATTCAAGATTCAAGAGAGACAAGAAGCAATTGACTGGCTTCTTGGTTTAGCTGTTAGACTTGAATATGGAGATAATGCTGAAAAATACAAGGACCTGGTACCTGATAATACAAAAAATGCTGACAATGCAGCTAAAAATGCAGAGCCATTGATCAATTTGGATGTAAGTAATCCTGATTTTAAGGCTGGTGTAATGGCTTTGGCTAACCTTCTTCAGATTCAGCGTCATGATGATTACCTGGTAATGCTTAAGGCAATTCGCATTTTGGTCCAGGAGCGCCTGACACAGGATGCAGTTGCTAAAGCAAATCAAACAAAAGAGGGCTTGCCTGTTGCTTTAGACAAGCATATTCTTGGTTTTGACACAGGAGATGCAGTTCTTAATGAAGCTGCTCAAATTCTGCGATTGCTGCATATAGAAGAACTCAGAGAGCTACAGACAAAAATTAATGAAGCCATAGTAGCTGTTCAGGCAATTATTGCCGATCCAAAGACAGACCACAGACTGGGGAAAGTTGGAAGATGA