Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atp5f1c
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATP synthase F1 subunit gamma
Also known as Atp5c1
Coordinate chr17:72209321-72231562
Strand +
Gene summary Contributes to ATP hydrolysis activity. Involved in ATP metabolic process and cellular response to nitric oxide. Located in mitochondrial inner membrane. Part of mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1). Biomarker of schizophrenia. Orthologous to human ATP5F1C (ATP synthase F1 subunit gamma). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5f1c

Retroname Coord Strand Genomic Region ENSG
Atp5c1P2 chr13:73853874-73854542 - Intergenic
 N/A UCSC
Atp5c1P4 chrX:138263658-138264247 + Intergenic
 N/A UCSC
Atp5c1P1 chr1:47730965-47731806 + Intergenic
 N/A UCSC
Atp5c1P3 chr17:71360022-71360714 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_053825.2
GCAGTGAGCCTCGTCTGCCCGACCTTCAAGGTTCTACCATGTTCTCGCGGGCGAGTATTGTCGGGCTGTCGGCCTGCTCCTTGCAGCCGCAATGGATCCAAGTTCGAAACATGGCAACCCTGAAAGACATTACCAGGAGACTGAAGTCCATCAAAAACATCCAGAAGATTACCAAGTCTATGAAGATGGTGGCAGCAGCGAAGTACGCCCGGGCTGAGCGGGAGCTGAAGCCAGCTCGAGTGTATGGGACAGGCTCCTTGGCTCTGTATGAGAAGGCTGAGATTAAGGGACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGTGTCCTCGGATCGAGGCCTTTGTGGTGCTATTCATTCCTCCGTGGCTAAACAAATGAAGAATGACATGGCTGCCCTCACAGCAGCTGGGAAAGAAGTTATGATTGTTGGAATTGGTGAAAAAATCAAGAGCATACTTTATAGGACTCACTCTGATCAGTTTTTGGTGTCCTTCAAAGACGTGGGGCGGAAGCCCCCTACTTTTGGAGATGCATCGGTCATTGCCTTGGAGTTGTTAAATTCGGGATATGAATTTGATGAAGGCTCTATTATCTTTAATCAGTTCAAGTCTGTTATCTCCTACAAGACAGAAGAGAAGCCCATCTTCTCTTTCAGTACCGTCGTGGCTGCTGAGAACATGAGCATTTATGATGACATTGATGCTGACGTGCTGCAGAATTACCAGGAATACAATCTGGCCAACATCATCTACTACTCCCTGAAGGAGTCCACCACCAGTGAGCAGAGTGCCAGGATGACCGCCATGGACAACGCCAGCAAGAACGCCTCTGATATGATTGATAAATTGACGCTGACTTTCAACCGCACCCGCCAGGCCGTCATCACGAAGGAGCTGATAGAGATCATCTCCGGGGCTGCTGCTCTGGATTAATGAGAATCAAGTTACATCCTCAGACAAGAGGTGAAGAAGGAAAACGCAGCTGATTTTAACTGATTGCTGTCCTTGTTAGAAGAAACTTGGTCCACTGAGTCACAAAGACAGCAGGATGTTTGTAAATTATCTTACAATAAACAACTTA
>XM_006254231.3
gggcagttaaaggttgctgaggaaggaagagacattttttcccactggtgctagcactgGATCCAAGTTCGAAACATGGCAACCCTGAAAGACATTACCAGGAGACTGAAGTCCATCAAAAACATCCAGAAGATTACCAAGTCTATGAAGATGGTGGCAGCAGCGAAGTACGCCCGGGCTGAGCGGGAGCTGAAGCCAGCTCGAGTGTATGGGACAGGCTCCTTGGCTCTGTATGAGAAGGCTGAGATTAAGGGACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGTGTCCTCGGATCGAGGCCTTTGTGGTGCTATTCATTCCTCCGTGGCTAAACAAATGAAGAATGACATGGCTGCCCTCACAGCAGCTGGGAAAGAAGTTATGATTGTTGGAATTGGTGAAAAAATCAAGAGCATACTTTATAGGACTCACTCTGATCAGTTTTTGGTGTCCTTCAAAGACGTGGGGCGGAAGCCCCCTACTTTTGGAGATGCATCGGTCATTGCCTTGGAGTTGTTAAATTCGGGATATGAATTTGATGAAGGCTCTATTATCTTTAATCAGTTCAAGTCTGTTATCTCCTACAAGACAGAAGAGAAGCCCATCTTCTCTTTCAGTACCGTCGTGGCTGCTGAGAACATGAGCATTTATGATGACATTGATGCTGACGTGCTGCAGAATTACCAGGAATACAATCTGGCCAACATCATCTACTACTCCCTGAAGGAGTCCACCACCAGTGAGCAGAGTGCCAGGATGACCGCCATGGACAACGCCAGCAAGAACGCCTCTGATATGATTGATAAATTGACGCTGACTTTCAACCGCACCCGCCAGGCCGTCATCACGAAGGAGCTGATAGAGATCATCTCCGGGGCTGCTGCTCTGGATTAATGAGAATCAAGTTACATCCTCAGACAAGAGGTGAAGAAGGAAAACGCAGCTGATTTTAACTGATTGCTGTCCTTGTTAGAAGAAACTTGGTCCACTGAGTCACAAAGACAGCAGGATGTTTGTAAATTATCTTACAATAAACAACTTACAAT