Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tpt1
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name tumor protein, translationally-controlled 1
Also known as -
Coordinate chr15:57891680-57894504
Strand +
Gene summary Predicted to enable calcium ion binding activity. Involved in spermatogenesis. Predicted to be located in several cellular components, including microtubule cytoskeleton; multivesicular body; and nucleoplasm. Predicted to be active in cytoplasm. Orthologous to several human genes including TPT1 (tumor protein, translationally-controlled 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tpt1

Retroname Coord Strand Genomic Region ENSG
Tpt1P1 chr1:20115926-20116720 + Intragenic
N/A UCSC
Tpt1P2 chr4:49738080-49738765 - Intergenic
N/A UCSC
Tpt1P3 chr6:6614690-6615109 + Intergenic
N/A UCSC
Tpt1P4 chr7:138894876-138895665 - Intergenic
N/A UCSC
Tpt1P5 chr7:57531810-57532101 + Intragenic
N/A UCSC
Tpt1P6 chr7:71813256-71813967 + Intragenic
N/A UCSC
Tpt1P7 chr7:72580738-72581372 + Intergenic
N/A UCSC
Tpt1P8 chr8:90304111-90304865 + Intergenic
N/A UCSC
Tpt1P9 chr9:105001765-105002502 + Intergenic
N/A UCSC
Tpt1P10 chr12:5913058-5913847 - Intergenic
N/A UCSC
Tpt1P11 chr13:27277968-27281800 + Intergenic
N/A UCSC
Tpt1P12 chr13:36915839-36916497 - Intergenic
N/A UCSC
Tpt1P13 chr15:13883884-13884618 - Intergenic
N/A UCSC
Tpt1P14 chr15:24143381-24144103 + Intergenic
N/A UCSC
Tpt1P15 chr16:13950352-13951039 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_053867.1
GCGCCGCTCCGGCTGCACCGCGCTCGCTCCGCGCTGTCAGGCTAGCGCCACTGTCCCCAGCCGTCACCATGATCATCTACCGGGACCTCATCAGCCATGACGAGCTGTTCTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGCTGTGCCTGGAGGTGGAGGGCAAGATGGTCAGTAGAACAGAGGGTGCCATCGATGATTCACTCATTGGTGGAAATGCTTCCGCTGAAGGTCCGGAGGGCGAAGGTACCGAAAGCACAGTAGTCACCGGTGTTGACATTGTCATGAACCATCACTTACAAGAAACCAGCTTCACAAAAGAGGCCTACAAAAAGTATATCAAAGACTACATGAAATCACTCAAGGGCAAACTTGAAGAACAGAAACCAGAAAGGGTAAAGCCTTTTATGACTGGAGCTGCAGAGCAAATTAAGCACATCCTTGCTAATTTCAATAACTACCAGTTTTTTATTGGTGAAAACATGAATCCAGATGGCATGGTTGCTCTACTGGACTACCGTGAAGATGGTGTGACTCCATTCATGATTTTCTTTAAGGATGGCTTAGAGATGGAAAAATGTTAACAAATTGGATCTATCGCCTGTCACCATAATTGGCTGCTGCTTACCATCCATACAACACCAGGACTTAGGACAAATGGGACTGATATCATCTTGAGCTTTTATTTTGACCGTGATTTATTTGGAGTGGAGGCATTGTTTTTTTTTTTTTTTAAAGAAAAAAAAACATGTCATGTGGGTTGTCTAAAAATAAAGTGCATTTAAATTCA