Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pgap2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name post-GPI attachment to proteins 2
Also known as Frag1
Coordinate chr1:167309021-167335550
Strand +
Gene summary Involved in GPI anchor biosynthetic process and protein localization to plasma membrane. Located in Golgi membrane and endoplasmic reticulum membrane. Colocalizes with Golgi apparatus and endoplasmic reticulum. Orthologous to human PGAP2 (post-GPI attachment to proteins 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pgap2

Retroname Coord Strand Genomic Region ENSG
Pgap2P1 chr9:53595233-53595734 - Intergenic
 N/A UCSC
Pgap2P2 chrX:58823620-58824763 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006229831.3
GGAAGAAAAAAAAAAAGGAGGGACTATGGGGAGGGACGAGGAGTCCCACTCTCTCTGCGGCAACGGTTGGCTGAGAAAGGGTCATGACGTCACACAGGGCCCTCGAAGAGGGCAGGTGAGTGGCTAGAGTAGTGAGCACCAAACAGCAGTGACGTTGGGTTCAGACCCCGCCCCTTTCCTTGGAGCGCGGAGACTCGCTACGGAAGCTTCGGCCAATCAGAAGGAAGACCCAAGGATGATATGGTGATGGCATGCAGCCAGAGGTAAAATGACAAGGTGACTTATTCGACATGTCAAAATCTTGTTTCCAGAGCTCTCTGACTGCTCTCACGTACTCAAAAATAGTGGGGACAGAGCCGACCTGGGGAGGCTTGGCTTCAAGAGACGCTAGATTATAAAGAAAGCCAGGAGTCCCGGTCGCCAAAATGGGGAGGAGCCAGTGAAGAAACGGGCCCAGTTTCCTCTTTAAGACCCACCCCAGAGCGCTGGCCCCGCCTCACGCCGTTGCTGCTGCGACCCGCCCCCTTCCACTCGCCCCCGGGCTGGGCTGGGGCTCCCGGTTCCGCGCCCCTGGCTACGGGGGTACGGCCCCCTAGCCACCACTACTTGGGGCCTTCTGCTCAAGATCCCTCCAGGCACTGCGGATGGAGGCGTGGGGgagccttggaacctcagactagttttgaatccctgccctgccagtcactagcttgtggctttgaGTCTGACAAGATGTACCAGGTCCCATTGACACTGGACCGGGATGGGACCCTAGTCCGGCTCCGCTTCACTATGGTGGCCCTGATCACGGTCTGCTGTCCACTTGTCGCCTTCTTCTTCTGCATCCTGTGGTCCCTGCTCTTCCACTTCAAGGAGACAACATCTACACACTGTGGGGCCCAGGTATCCTACCAGGCCCCAAGTTGTGCCCCTTGCCTTGCTTGGACCACTCACAGGATGTTCTCTGCGGCCTTGGACCCCGATGGGACCGTGTTCCGGCTCCGCTTCACGGCCTTTGTCTGGTGGGTCATCACTTTCCCCCTGTTCGGCTTCTTCTTCTGCATCATCTGGTCTCTGGTGTTCCACTTTGAGTACACGGTGGCCACTGACTGTGGGGTGCCCAATTACCTGCCATCAGTGAGCTCTGCCATTGGTGGGGAGGTTCCCCAGCGCTACGTGTGGCGTTTCTGCATTGGCCTGCACTCGGCACCCCGCTTCTTGACAGCCTTCGCCTATTGGAACCACTACCTCAGCTGTGCATCCCCGTGCCCGGGTTACCGCCTTCTCTGCCGCCTCAACTTCAGTCTCAATGTGGTGGAGAACCTGGCACTGCTCGTGCTCACCTATGTCTCCTCCTCCGAGGACTTCACCATCCATGAAAATGCTTTCATTGTGTTTATCGCGGCCTCCCTCAGTTACATGCTCCTCACCTGCATTCTCTGGCGGCTGACCAAGAAGCACACAGTAAGTCAGGAGGATCGCAAGTCCTACAGCTGGAAACAACGGCTCTTCATCATCAACTTCATCTCCTTCTTCTCGGCGCTGGCTGTTTACTTCCGGCACAACATGTATTGTGAGGCTGGAGTGTACACCATCTTTGCCATCCTGGAGTACACTGTGGTCCTAACCAACATGGCGTTCCACATGACAGCCTGGTGGGACTTCGGGAACAAAGAGCTGCTAATAACCTCTCAGCCTGAGGAAAAGAGATTCTAAACCCCGTCTCTGATCCTGGAAAACAAGAAACCACTCTGGCCTTCCCTATCTCAGTGTCCTCTCTGGGCCCTTCTCCGTCTGGGGACTGGGAGAGAAGAGCAGGAAGGGTAGGACAAGGCTGACCCCAGCACTGCTGACTTCTCCCCACCTCTCATCTCTCATGGGGATCTTCAAGAAGCATCACTACTCACTGAAAGGTCCTAAAAAGCTGAGCTGGCAGGAAAGCCCTACCACTTGGTGCTaagaaaaaaaaaaaaaaaaaaaaagagagagagagaaagaacaaaaaaagaaGAGTCCTGAGGTTCATGACTGTCTAGTTTTTGACCTTTATATAGACACGTTTCACTAAGGTTAGGGTCCAGAGCAATGGCTGTGACCGTCCGGTCTGGTCATTGATCTGACTGATGTGTCTAGCGATCTACCGTGTACACCCACTGTGTGTACACCCAGGTGGTAGTTCTATAACTTGCCCAGGTGTTCTAGAGGTGTAACCTCTTCCCCATCAGCCTCACTGTGTTCCCGTGTATGCCTGGGGGAAGTATGTTGTGTGATTTCTAAGGGCTTTGGTCTCTGAGGTCATCCAATGGAAGTGTTGTGTTGTACTTGACAGGTAACTTGTCCCAGAAGCAGCATCAAGTGTAGGATATATTTTCCTTTCccatctaaaacctctggcttcttggaatatgtctgtcatcccaacacattggaggctgagatgggtggactgcttcaggatccacgccaccctgggctacatgtgagaccttgtctcaaaaaTGAAATAAGATgcaaggcacggtggcacatgcctttaatcccaacacagcagagacaggcaaatatctgttgagttcaaggccagccagggctatacagtaagaccctgttttagaagaaaaaaaAAAAATCAAAGAACCCTAAAATCGCAGGCTTCTGAGACCTTTCCCTCCTTGGATGGGGGGAGGGGTCAGAGGTAGATTTCCCTACTCCAGAATGGGTTCCTTGGCTTTCCTTTATCCTCGTGACTGTCCCACATCCCCATCTTTCATTTGTATATTTTATTTCAAAGGACAATAAATTTTTTTCTTTTGCCAACA
>XM_006229837.3
AAAAAAAAGGAGGGACTATGGGGAGGGACGAGGAGTCCCACTCTCTCTGCGGCAACGGTTGGCTGAGAAAGGGTCATGACGTCACACAGGGCCCTCGAAGAGGGCAGGTGAGTGGCTAGAGTAGTGAGCACCAAACAGCAGTGACGTTGGGTTCAGACCCCGCCCCTTTCCTTGGAGCGCGGAGACTCGCTACGGAAGCTTCGGCCAATCAGAAGGAAGACCCAAGGATGATATGGTGATGGCATGCAGCCAGAGGTAAAATGACAAGGTGACTTATTCGACATGTCAAAATCTTGTTTCCAGAGCTCTCTGACTGCTCTCACGTACTCAAAAATAGTGGGGACAGAGCCGACCTGGGGAGGCTTGGCTTCAAGAGACGCTAGATTATAAAGAAAGCCAGGAGTCCCGGTCGCCAAAATGGGGAGGAGCCAGTGAAGAAACGGGCCCAGTTTCCTCTTTAAGACCCACCCCAGAGCGCTGGCCCCGCCTCACGCCGTTGCTGCTGCGACCCGCCCCCTTCCACTCGCCCCCGGGCTGGGCTGGGGCTCCCGGTTCCGCGCCCCTGGCTACGGGGGTACGGCCCCCTAGCCACCACTACTTGGGGCCTTCTGCTCAAGATCCCTCCAGGCACTGCGGATGGAGGCGTGGGGgagccttggaacctcagactagttttgaatccctgccctgccagtcactagcttgtggctttgaGTCTGACAAGATGTACCAGGTCCCATTGACACTGGACCGGGATGGGACCCTAGTCCGGCTCCGCTTCACTATGGTGGCCCTGATCACGGTCTGCTGTCCACTTGTCGCCTTCTTCTTCTGCATCCTGTGGTCCCTGCTCTTCCACTTCAAGGAGACAACATCTACACACTGTGGGGTGCCCAATTACCTGCCATCAGTGAGCTCTGCCATTGGTGGGGAGGTTCCCCAGCGCTACGTGTGGCGTTTCTGCATTGGCCTGCACTCGGCACCCCGCTTCTTGACAGCCTTCGCCTATTGGAACCACTACCTCAGCTGTGCATCCCCGTGCCCGGGTTACCGCCTTCTCTGCCGCCTCAACTTCAGTCTCAATGTGGTGGAGAACCTGGCACTGCTCGTGCTCACCTATGTCTCCTCCTCCGAGGACTTCACCATCCATGAAAATGCTTTCATTGTGTTTATCGCGGCCTCCCTCAGTTACATGCTCCTCACCTGCATTCTCTGGCGGCTGACCAAGAAGCACACAGTAAGTCAGGAGGATCGCAAGTCCTACAGCTGGAAACAACGGCTCTTCATCATCAACTTCATCTCCTTCTTCTCGGCGCTGGCTGTTTACTTCCGGCACAACATGTATTGTGAGGCTGGAGTGTACACCATCTTTGCCATCCTGGAGTACACTGTGGTCCTAACCAACATGGCGTTCCACATGACAGCCTGGTGGGACTTCGGGAACAAAGAGCTGCTAATAACCTCTCAGCCTGAGGAAAAGAGATTCTAAACCCCGTCTCTGATCCTGGAAAACAAGAAACCACTCTGGCCTTCCCTATCTCAGTGTCCTCTCTGGGCCCTTCTCCGTCTGGGGACTGGGAGAGAAGAGCAGGAAGGGTAGGACAAGGCTGACCCCAGCACTGCTGACTTCTCCCCACCTCTCATCTCTCATGGGGATCTTCAAGAAGCATCACTACTCACTGAAAGGTCCTAAAAAGCTGAGCTGGCAGGAAAGCCCTACCACTTGGTGCTaagaaaaaaaaaaaaaaaaaaaaagagagagagagaaagaacaaaaaaagaaGAGTCCTGAGGTTCATGACTGTCTAGTTTTTGACCTTTATATAGACACGTTTCACTAAGGTTAGGGTCCAGAGCAATGGCTGTGACCGTCCGGTCTGGTCATTGATCTGACTGATGTGTCTAGCGATCTACCGTGTACACCCACTGTGTGTACACCCAGGTGGTAGTTCTATAACTTGCCCAGGTGTTCTAGAGGTGTAACCTCTTCCCCATCAGCCTCACTGTGTTCCCGTGTATGCCTGGGGGAAGTATGTTGTGTGATTTCTAAGGGCTTTGGTCTCTGAGGTCATCCAATGGAAGTGTTGTGTTGTACTTGACAGGTAACTTGTCCCAGAAGCAGCATCAAGTGTAGGATATATTTTCCTTTCccatctaaaacctctggcttcttggaatatgtctgtcatcccaacacattggaggctgagatgggtggactgcttcaggatccacgccaccctgggctacatgtgagaccttgtctcaaaaaTGAAATAAGATgcaaggcacggtggcacatgcctttaatcccaacacagcagagacaggcaaatatctgttgagttcaaggccagccagggctatacagtaagaccctgttttagaagaaaaaaaAAAAATCAAAGAACCCTAAAATCGCAGGCTTCTGAGACCTTTCCCTCCTTGGATGGGGGGAGGGGTCAGAGGTAGATTTCCCTACTCCAGAATGGGTTCCTTGGCTTTCCTTTATCCTCGTGACTGTCCCACATCCCCATCTTTCATTTGTATATTTTATTTCAAAGGACAATAAATTTTTTTCTTTTGCCAACA